BLASTX nr result
ID: Dioscorea21_contig00012537
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00012537 (259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003556191.1| PREDICTED: E3 ubiquitin-protein ligase RNF16... 77 2e-12 ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF16... 75 6e-12 ref|NP_192694.2| protease-associated (PA) RING/U-box zinc finger... 74 1e-11 ref|XP_002533876.1| zinc finger protein, putative [Ricinus commu... 74 2e-11 ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|2... 74 2e-11 >ref|XP_003556191.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Glycine max] Length = 495 Score = 76.6 bits (187), Expect = 2e-12 Identities = 41/86 (47%), Positives = 49/86 (56%) Frame = -2 Query: 258 AGNPEGIDIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMXXXXXXXXXXXXX 79 AGN GI IHAVFVS+ SGEILKKYA ++ +WLIP+ E+SAWS+M Sbjct: 120 AGNSAGIRIHAVFVSKASGEILKKYAGLTNVEIWLIPTFENSAWSIMAISFISLLAMSAV 179 Query: 78 LATCFFVXXXXXXXXXXXXXXXQEFH 1 LATCFFV +EFH Sbjct: 180 LATCFFVRKHRIRRERPRASLVREFH 205 >ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Glycine max] Length = 469 Score = 75.1 bits (183), Expect = 6e-12 Identities = 40/86 (46%), Positives = 48/86 (55%) Frame = -2 Query: 258 AGNPEGIDIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMXXXXXXXXXXXXX 79 AGN GI IHAVFVS+ SGEIL KYA ++ +WLIP+ E+SAWS+M Sbjct: 120 AGNSAGIKIHAVFVSKASGEILSKYAGLTNVEIWLIPTFENSAWSIMAISFISLLAMSAV 179 Query: 78 LATCFFVXXXXXXXXXXXXXXXQEFH 1 LATCFFV +EFH Sbjct: 180 LATCFFVRRHRIRRERPRAPLVREFH 205 >ref|NP_192694.2| protease-associated (PA) RING/U-box zinc finger-containing protein [Arabidopsis thaliana] gi|110737791|dbj|BAF00834.1| hypothetical protein [Arabidopsis thaliana] gi|332657365|gb|AEE82765.1| protease-associated (PA) RING/U-box zinc finger-containing protein [Arabidopsis thaliana] Length = 448 Score = 73.9 bits (180), Expect = 1e-11 Identities = 35/67 (52%), Positives = 44/67 (65%) Frame = -2 Query: 258 AGNPEGIDIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMXXXXXXXXXXXXX 79 AGNP G+ I+ FVS+ +GE+LK+YA R D VWL+PS E+SAWS+M Sbjct: 121 AGNPSGVLIYGTFVSKATGEVLKEYAGRTDFEVWLMPSFETSAWSIMAISFISLLAMSAV 180 Query: 78 LATCFFV 58 LATCFFV Sbjct: 181 LATCFFV 187 >ref|XP_002533876.1| zinc finger protein, putative [Ricinus communis] gi|223526177|gb|EEF28507.1| zinc finger protein, putative [Ricinus communis] Length = 434 Score = 73.6 bits (179), Expect = 2e-11 Identities = 39/86 (45%), Positives = 47/86 (54%) Frame = -2 Query: 258 AGNPEGIDIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMXXXXXXXXXXXXX 79 AGN GI IHAVF+S+ SGE LKKY ++ +WLIPS E+SAWS+M Sbjct: 124 AGNSAGIKIHAVFISKSSGETLKKYVGLSEMELWLIPSFENSAWSIMAISFISLLAMSAV 183 Query: 78 LATCFFVXXXXXXXXXXXXXXXQEFH 1 LATCFFV +EFH Sbjct: 184 LATCFFVRRHRIRRGRPRSSRVREFH 209 >ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|222862861|gb|EEF00368.1| predicted protein [Populus trichocarpa] Length = 437 Score = 73.6 bits (179), Expect = 2e-11 Identities = 40/86 (46%), Positives = 47/86 (54%) Frame = -2 Query: 258 AGNPEGIDIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMXXXXXXXXXXXXX 79 AGN G+ I AVFVS+ SGE LKKYA DL +W+IPS E+SAWS+M Sbjct: 118 AGNSAGVTIPAVFVSKTSGETLKKYAGLTDLELWIIPSFENSAWSIMAISFISLLAMSAV 177 Query: 78 LATCFFVXXXXXXXXXXXXXXXQEFH 1 LATCFFV +EFH Sbjct: 178 LATCFFVRRHRIRRERPRSSRVREFH 203