BLASTX nr result

ID: Dioscorea21_contig00012537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012537
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556191.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...    77   2e-12
ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...    75   6e-12
ref|NP_192694.2| protease-associated (PA) RING/U-box zinc finger...    74   1e-11
ref|XP_002533876.1| zinc finger protein, putative [Ricinus commu...    74   2e-11
ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_003556191.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Glycine max]
          Length = 495

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/86 (47%), Positives = 49/86 (56%)
 Frame = -2

Query: 258 AGNPEGIDIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMXXXXXXXXXXXXX 79
           AGN  GI IHAVFVS+ SGEILKKYA   ++ +WLIP+ E+SAWS+M             
Sbjct: 120 AGNSAGIRIHAVFVSKASGEILKKYAGLTNVEIWLIPTFENSAWSIMAISFISLLAMSAV 179

Query: 78  LATCFFVXXXXXXXXXXXXXXXQEFH 1
           LATCFFV               +EFH
Sbjct: 180 LATCFFVRKHRIRRERPRASLVREFH 205


>ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Glycine max]
          Length = 469

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/86 (46%), Positives = 48/86 (55%)
 Frame = -2

Query: 258 AGNPEGIDIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMXXXXXXXXXXXXX 79
           AGN  GI IHAVFVS+ SGEIL KYA   ++ +WLIP+ E+SAWS+M             
Sbjct: 120 AGNSAGIKIHAVFVSKASGEILSKYAGLTNVEIWLIPTFENSAWSIMAISFISLLAMSAV 179

Query: 78  LATCFFVXXXXXXXXXXXXXXXQEFH 1
           LATCFFV               +EFH
Sbjct: 180 LATCFFVRRHRIRRERPRAPLVREFH 205


>ref|NP_192694.2| protease-associated (PA) RING/U-box zinc finger-containing protein
           [Arabidopsis thaliana] gi|110737791|dbj|BAF00834.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332657365|gb|AEE82765.1| protease-associated (PA)
           RING/U-box zinc finger-containing protein [Arabidopsis
           thaliana]
          Length = 448

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/67 (52%), Positives = 44/67 (65%)
 Frame = -2

Query: 258 AGNPEGIDIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMXXXXXXXXXXXXX 79
           AGNP G+ I+  FVS+ +GE+LK+YA R D  VWL+PS E+SAWS+M             
Sbjct: 121 AGNPSGVLIYGTFVSKATGEVLKEYAGRTDFEVWLMPSFETSAWSIMAISFISLLAMSAV 180

Query: 78  LATCFFV 58
           LATCFFV
Sbjct: 181 LATCFFV 187


>ref|XP_002533876.1| zinc finger protein, putative [Ricinus communis]
           gi|223526177|gb|EEF28507.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 434

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/86 (45%), Positives = 47/86 (54%)
 Frame = -2

Query: 258 AGNPEGIDIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMXXXXXXXXXXXXX 79
           AGN  GI IHAVF+S+ SGE LKKY    ++ +WLIPS E+SAWS+M             
Sbjct: 124 AGNSAGIKIHAVFISKSSGETLKKYVGLSEMELWLIPSFENSAWSIMAISFISLLAMSAV 183

Query: 78  LATCFFVXXXXXXXXXXXXXXXQEFH 1
           LATCFFV               +EFH
Sbjct: 184 LATCFFVRRHRIRRGRPRSSRVREFH 209


>ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|222862861|gb|EEF00368.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/86 (46%), Positives = 47/86 (54%)
 Frame = -2

Query: 258 AGNPEGIDIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMXXXXXXXXXXXXX 79
           AGN  G+ I AVFVS+ SGE LKKYA   DL +W+IPS E+SAWS+M             
Sbjct: 118 AGNSAGVTIPAVFVSKTSGETLKKYAGLTDLELWIIPSFENSAWSIMAISFISLLAMSAV 177

Query: 78  LATCFFVXXXXXXXXXXXXXXXQEFH 1
           LATCFFV               +EFH
Sbjct: 178 LATCFFVRRHRIRRERPRSSRVREFH 203


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