BLASTX nr result

ID: Dioscorea21_contig00012528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012528
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU60361.1| glutamyl-tRNA reductase binding protein [Nicotian...    84   9e-15
emb|CBI25290.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002274572.1| PREDICTED: uncharacterized protein LOC100260...    84   2e-14
gb|ADU60362.1| glutamyl-tRNA reductase binding protein [Nicotian...    83   3e-14
ref|XP_002316448.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13

>gb|ADU60361.1| glutamyl-tRNA reductase binding protein [Nicotiana tabacum]
          Length = 320

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/80 (55%), Positives = 53/80 (66%)
 Frame = +1

Query: 7   SSRFSLHLPRCSLCIATEPSPLKEEERQVKPSLAEVSRTIMELASVGTLSTTIDDGWPLG 186
           S RFS+   +C++ + +EP    E+    KP  AEVSRTIMEL+SVGTLST   DGWPLG
Sbjct: 36  SPRFSIGPLKCAVSVVSEPIQ-SEKTNNGKPYPAEVSRTIMELSSVGTLSTPTQDGWPLG 94

Query: 187 IGARFVVDAQGLPALCLNDS 246
            G RF VD  G P L LND+
Sbjct: 95  FGVRFAVDPHGTPVLFLNDA 114


>emb|CBI25290.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/75 (57%), Positives = 52/75 (69%)
 Frame = +1

Query: 34  RCSLCIATEPSPLKEEERQVKPSLAEVSRTIMELASVGTLSTTIDDGWPLGIGARFVVDA 213
           +CS+ +A+EP+ L  E  + KP  AEVSRTIMEL+SV TLS    DGWPLG+G RF VD 
Sbjct: 44  KCSVSVASEPAHL--ELVRNKPFPAEVSRTIMELSSVATLSALTQDGWPLGVGVRFAVDP 101

Query: 214 QGLPALCLNDSERFF 258
           QG P +CLN S   F
Sbjct: 102 QGTPIVCLNASHSHF 116


>ref|XP_002274572.1| PREDICTED: uncharacterized protein LOC100260424 [Vitis vinifera]
          Length = 324

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/75 (57%), Positives = 52/75 (69%)
 Frame = +1

Query: 34  RCSLCIATEPSPLKEEERQVKPSLAEVSRTIMELASVGTLSTTIDDGWPLGIGARFVVDA 213
           +CS+ +A+EP+ L  E  + KP  AEVSRTIMEL+SV TLS    DGWPLG+G RF VD 
Sbjct: 50  KCSVSVASEPAHL--ELVRNKPFPAEVSRTIMELSSVATLSALTQDGWPLGVGVRFAVDP 107

Query: 214 QGLPALCLNDSERFF 258
           QG P +CLN S   F
Sbjct: 108 QGTPIVCLNASHSHF 122


>gb|ADU60362.1| glutamyl-tRNA reductase binding protein [Nicotiana tabacum]
          Length = 320

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/78 (56%), Positives = 52/78 (66%)
 Frame = +1

Query: 13  RFSLHLPRCSLCIATEPSPLKEEERQVKPSLAEVSRTIMELASVGTLSTTIDDGWPLGIG 192
           RFS+   RC++ + +EP    E+    KP  AEVSRTIMEL+SVGTLST   DGWPLG G
Sbjct: 38  RFSIGPLRCAVSVVSEPIQ-SEKTNNGKPYPAEVSRTIMELSSVGTLSTPTLDGWPLGFG 96

Query: 193 ARFVVDAQGLPALCLNDS 246
            RF VD  G P L LND+
Sbjct: 97  VRFAVDPHGTPVLFLNDA 114


>ref|XP_002316448.1| predicted protein [Populus trichocarpa] gi|222865488|gb|EEF02619.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/83 (54%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = +1

Query: 13  RFSLHLPRCSLC-IATEPSPLKEEERQVKPSLAEVSRTIMELASVGTLSTTIDDGWPLGI 189
           +FSL   +CSL  ++ EP          KP  AE+SRTIMEL+SVGTLST   DGWPL +
Sbjct: 41  QFSL---KCSLSTVSAEPPTHVVGSSNDKPFPAEISRTIMELSSVGTLSTLTPDGWPLSV 97

Query: 190 GARFVVDAQGLPALCLNDSERFF 258
           G RF VD  G P LCL+DS R F
Sbjct: 98  GVRFAVDDDGTPILCLSDSHRQF 120