BLASTX nr result

ID: Dioscorea21_contig00012520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012520
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_003623876.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...    58   1e-06
ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267...    58   1e-06
emb|CBI28665.3| unnamed protein product [Vitis vinifera]               58   1e-06
gb|AAF76470.1|AC020622_4 Contains similarity to a hypothetical p...    55   7e-06

>ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|222861544|gb|EEE99086.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -2

Query: 532 EFMDKSKWSSIVYRKGQKQLARLFLKEAEHALEM 431
           +FM +++WSSIVYRKGQKQLARLFLKEAEH L +
Sbjct: 515 KFMSRNRWSSIVYRKGQKQLARLFLKEAEHVLHL 548


>ref|XP_003623876.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
           N-methyltransferase [Medicago truncatula]
           gi|355498891|gb|AES80094.1| Ribulose-1,5 bisphosphate
           carboxylase/oxygenase large subunit N-methyltransferase
           [Medicago truncatula]
          Length = 571

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -2

Query: 526 MDKSKWSSIVYRKGQKQLARLFLKEAEHALEMCTTE*MKI 407
           M ++KWS+IVYR+GQKQL RLFLKEAEHAL +  +E M +
Sbjct: 531 MTRNKWSAIVYRRGQKQLTRLFLKEAEHALHLSMSEEMAV 570


>ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267311 [Vitis vinifera]
          Length = 561

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = -2

Query: 526 MDKSKWSSIVYRKGQKQLARLFLKEAEHALEMCTTE 419
           M +++WSSIVYR+GQKQL RLFLKEAEHAL++  +E
Sbjct: 524 MSRNRWSSIVYRRGQKQLTRLFLKEAEHALQLSLSE 559


>emb|CBI28665.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = -2

Query: 526 MDKSKWSSIVYRKGQKQLARLFLKEAEHALEMCTTE 419
           M +++WSSIVYR+GQKQL RLFLKEAEHAL++  +E
Sbjct: 528 MSRNRWSSIVYRRGQKQLTRLFLKEAEHALQLSLSE 563


>gb|AAF76470.1|AC020622_4 Contains similarity to a hypothetical protein gi|6983878 from Oryza
           Sativa BAC gb|AP001168 [Arabidopsis thaliana]
          Length = 441

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -2

Query: 535 GEFMDKSKWSSIVYRKGQKQLARLFLKEAEHALEM 431
           G  M ++KWSS+VYR+GQKQL RL LKEAEHAL +
Sbjct: 401 GRRMSRNKWSSVVYRRGQKQLTRLLLKEAEHALHL 435


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