BLASTX nr result

ID: Dioscorea21_contig00012515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012515
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273662.1| PREDICTED: dolichol kinase [Vitis vinifera] ...    85   5e-15
ref|XP_002523693.1| Transmembrane protein, putative [Ricinus com...    84   1e-14
ref|XP_004161315.1| PREDICTED: uncharacterized LOC101218949 [Cuc...    75   5e-12
ref|XP_004147285.1| PREDICTED: uncharacterized protein LOC101218...    75   5e-12
gb|EEC72477.1| hypothetical protein OsI_05838 [Oryza sativa Indi...    74   1e-11

>ref|XP_002273662.1| PREDICTED: dolichol kinase [Vitis vinifera]
           gi|297734932|emb|CBI17166.3| unnamed protein product
           [Vitis vinifera]
          Length = 564

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = -2

Query: 264 FKTRPGASSGILLGSVTMPAAMLSRLILLTRAISQHHVGSEDFSYMSMLYWAVSACNFGV 85
           FKTRPGASSGI LG+VT+PA M+SRLI L+RA S H VG ++  Y+ + YWA SA  FGV
Sbjct: 59  FKTRPGASSGIFLGAVTLPAVMISRLIQLSRAFSLHEVGIKELGYLKVQYWATSASCFGV 118

Query: 84  LI-LCLTLQNPPGDTSS 37
           LI + L ++  P ++ S
Sbjct: 119 LIFIFLLMRRSPNNSCS 135


>ref|XP_002523693.1| Transmembrane protein, putative [Ricinus communis]
           gi|223536997|gb|EEF38633.1| Transmembrane protein,
           putative [Ricinus communis]
          Length = 565

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
 Frame = -2

Query: 276 ALSQFKTRPGASSGILLGSVTMPAAMLSRLILLTRAISQHHVGSEDFSYMSMLYWAVSAC 97
           +LSQFKTRPGASSGI LG++T+PA MLS+LI L+RA S H + S + +Y++M YWA SA 
Sbjct: 58  SLSQFKTRPGASSGIFLGAITLPAVMLSKLIQLSRAFSLHQIESGELNYLAMQYWATSAI 117

Query: 96  NFGVLI-LCLTLQ 61
              VLI LC  ++
Sbjct: 118 CMSVLIFLCSVMR 130


>ref|XP_004161315.1| PREDICTED: uncharacterized LOC101218949 [Cucumis sativus]
          Length = 567

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/73 (47%), Positives = 48/73 (65%)
 Frame = -2

Query: 276 ALSQFKTRPGASSGILLGSVTMPAAMLSRLILLTRAISQHHVGSEDFSYMSMLYWAVSAC 97
           +L QFKTRPGASSGILLG++T+P  ML+++I LTRA S + +  E+    +M +W+ S C
Sbjct: 57  SLHQFKTRPGASSGILLGAITLPGVMLAKMIQLTRAFSSNQIALEEIETWTMQFWSTSTC 116

Query: 96  NFGVLILCLTLQN 58
              VL L     N
Sbjct: 117 CLSVLTLLRNAMN 129


>ref|XP_004147285.1| PREDICTED: uncharacterized protein LOC101218949 [Cucumis sativus]
          Length = 567

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/73 (47%), Positives = 48/73 (65%)
 Frame = -2

Query: 276 ALSQFKTRPGASSGILLGSVTMPAAMLSRLILLTRAISQHHVGSEDFSYMSMLYWAVSAC 97
           +L QFKTRPGASSGILLG++T+P  ML+++I LTRA S + +  E+    +M +W+ S C
Sbjct: 57  SLHQFKTRPGASSGILLGAITLPGVMLAKMIQLTRAFSSNQIALEEIETWTMQFWSTSTC 116

Query: 96  NFGVLILCLTLQN 58
              VL L     N
Sbjct: 117 CLSVLTLLRNAMN 129


>gb|EEC72477.1| hypothetical protein OsI_05838 [Oryza sativa Indica Group]
          Length = 568

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
 Frame = -2

Query: 273 LSQFKTRPGASSGILLGSVTMPAAMLSRLILLTRAISQHHVGSEDFSYMSMLYWAVSACN 94
           L +F+TRPGASSGILLG+ T+P+ MLSRLI L R +     G E+++Y+ M YWAVS   
Sbjct: 61  LRRFRTRPGASSGILLGATTLPSVMLSRLIQLYRVLLADPNGREEYAYLEMQYWAVSVSC 120

Query: 93  FGVLILCL--TLQNPPGDTS--SRLGGVLASIYSL 1
            G+L   +    Q+P    S  S+ G +L  +Y L
Sbjct: 121 LGMLSFFVWHLRQSPSNGNSIASKYGLLLIILYPL 155


Top