BLASTX nr result

ID: Dioscorea21_contig00012501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012501
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putat...   125   3e-27
ref|XP_004141674.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   125   5e-27
ref|NP_001043299.1| Os01g0550100 [Oryza sativa Japonica Group] g...   121   5e-26
dbj|BAJ94932.1| predicted protein [Hordeum vulgare subsp. vulgare]    120   1e-25
ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25

>ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223525817|gb|EEF28259.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 482

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/95 (67%), Positives = 69/95 (72%)
 Frame = +3

Query: 3   LRSSESSEISGAVKSLFGIDLVSRIHCAXXXXXXXXXXXVYALKCHISQDVNHLHEGLKR 182
           LR    SE    VK LFGIDLVSRIHC            VY+LKCHISQDVNHLHEGLK 
Sbjct: 212 LRPPSPSENPDTVKELFGIDLVSRIHCQESGEESSETESVYSLKCHISQDVNHLHEGLKH 271

Query: 183 AMKSELEKVSPSLGRSAVFSKESSISDLPRYLTVQ 287
            +KSELEK SPSLGRSA++ KES I+DLPRYLTVQ
Sbjct: 272 GLKSELEKASPSLGRSAIYLKESCINDLPRYLTVQ 306


>ref|XP_004141674.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Cucumis
           sativus] gi|449480596|ref|XP_004155940.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 6-like [Cucumis
           sativus]
          Length = 483

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/95 (65%), Positives = 74/95 (77%)
 Frame = +3

Query: 3   LRSSESSEISGAVKSLFGIDLVSRIHCAXXXXXXXXXXXVYALKCHISQDVNHLHEGLKR 182
           LRS+ SSEI  +VK+LFGIDLVSRIHC            VY+LKCHISQ+VNHL EGLK 
Sbjct: 212 LRSAGSSEIPDSVKNLFGIDLVSRIHCQESGEESSEAESVYSLKCHISQEVNHLSEGLKH 271

Query: 183 AMKSELEKVSPSLGRSAVFSKESSISDLPRYLTVQ 287
            +KSE++KVSPSLGRSA+F +ES I+ LPRYLT+Q
Sbjct: 272 GLKSEIDKVSPSLGRSAIFIRESRINSLPRYLTIQ 306


>ref|NP_001043299.1| Os01g0550100 [Oryza sativa Japonica Group]
           gi|57899410|dbj|BAD88057.1| putative ubiquitin-specific
           protease 6 [Oryza sativa Japonica Group]
           gi|57900055|dbj|BAD88117.1| putative ubiquitin-specific
           protease 6 [Oryza sativa Japonica Group]
           gi|113532830|dbj|BAF05213.1| Os01g0550100 [Oryza sativa
           Japonica Group] gi|215694688|dbj|BAG89879.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 474

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/95 (62%), Positives = 71/95 (74%)
 Frame = +3

Query: 3   LRSSESSEISGAVKSLFGIDLVSRIHCAXXXXXXXXXXXVYALKCHISQDVNHLHEGLKR 182
           L S  S   +G +K LFGIDLVSR+HCA           VY+LKCHIS DVNHLHEGLK 
Sbjct: 213 LTSETSEPPAGQMKELFGIDLVSRVHCAESGEESLERESVYSLKCHISHDVNHLHEGLKH 272

Query: 183 AMKSELEKVSPSLGRSAVFSKESSISDLPRYLTVQ 287
            +KSELEK SPSLGR+A++++ES I++LPRYLTVQ
Sbjct: 273 GLKSELEKASPSLGRTALYTRESRINELPRYLTVQ 307


>dbj|BAJ94932.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 474

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/95 (60%), Positives = 72/95 (75%)
 Frame = +3

Query: 3   LRSSESSEISGAVKSLFGIDLVSRIHCAXXXXXXXXXXXVYALKCHISQDVNHLHEGLKR 182
           L S  S   +G +K LFGIDLVSR+HCA           V++LKCHIS +VNHLHEGLK 
Sbjct: 213 LTSEASEPTAGQMKELFGIDLVSRVHCAESGEESSEAESVFSLKCHISHEVNHLHEGLKH 272

Query: 183 AMKSELEKVSPSLGRSAVFSKESSISDLPRYLTVQ 287
            +K+ELEKVSPSLGR+A++++ES I++LPRYLTVQ
Sbjct: 273 GLKTELEKVSPSLGRTAIYTRESRINELPRYLTVQ 307


>ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|222835980|gb|EEE74401.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/95 (62%), Positives = 69/95 (72%)
 Frame = +3

Query: 3   LRSSESSEISGAVKSLFGIDLVSRIHCAXXXXXXXXXXXVYALKCHISQDVNHLHEGLKR 182
           LRS   S+    +K LFGI+LVSR+HC            VY+LKCHISQ+VNHLHEGLK 
Sbjct: 212 LRSPSPSQNPDTIKELFGIELVSRVHCQESGEESSETESVYSLKCHISQEVNHLHEGLKH 271

Query: 183 AMKSELEKVSPSLGRSAVFSKESSISDLPRYLTVQ 287
            +KSELEK SPSLGRSA++ KES I+ LPRYLTVQ
Sbjct: 272 GLKSELEKASPSLGRSAIYLKESCINALPRYLTVQ 306


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