BLASTX nr result

ID: Dioscorea21_contig00012288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012288
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17911.3| unnamed protein product [Vitis vinifera]              266   2e-69
ref|XP_002263886.1| PREDICTED: APO protein 3, mitochondrial-like...   266   2e-69
emb|CAN78766.1| hypothetical protein VITISV_044397 [Vitis vinifera]   266   2e-69
ref|XP_002518315.1| APO protein 3, mitochondrial precursor, puta...   261   9e-68
ref|XP_003537145.1| PREDICTED: APO protein 3, mitochondrial-like...   253   3e-65

>emb|CBI17911.3| unnamed protein product [Vitis vinifera]
          Length = 454

 Score =  266 bits (681), Expect = 2e-69
 Identities = 135/238 (56%), Positives = 171/238 (71%), Gaps = 18/238 (7%)
 Frame = -3

Query: 660 LVPMLSRASRRFIKRSSFGTLAH-------------GSDHVDLPARHRRSERKPLVTAIN 520
           ++P   R  R+ + ++SF +L                S   +LP + ++SERKP VT++N
Sbjct: 53  MLPRRIRNLRKIVVQNSFASLIELGKFKLPFRSFSTNSTCKELPRKLKKSERKPWVTSVN 112

Query: 519 ELKHCARLQRKTRQDVREIPLRAPENGLLVKSMVSVAHSVLSARSKLLSCVSKIVGIIPV 340
           ELK  ARLQ++ RQ+V EI LR PENGLLVK +V  AH V +AR+KL +CVS +V    +
Sbjct: 113 ELKCKARLQKQARQEVSEITLRPPENGLLVKGLVPFAHEVYAARAKLFTCVSMVVKSTII 172

Query: 339 HVCRLCGEVHVGEFPHRIRSCEVAGS-----HSWGRGGIEHVLPLVESFHLYDRLGRAVS 175
           + CRLCGEVHVG  PH+IR+C V GS     H W  GG+EHVLPLVESFHLYDRLGRAVS
Sbjct: 173 YSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHVWEIGGVEHVLPLVESFHLYDRLGRAVS 232

Query: 174 HEERLLVDRIPAIVELCVQAGVDVPEYPTKRRVIPVYNIAGKMIDFEKKFPRDYSSGK 1
           H ERL VD+IPAIVELC+QAG+D+PEYPT+RR  PVYN+AG+MIDFE++FP+  S GK
Sbjct: 233 HNERLQVDQIPAIVELCIQAGLDIPEYPTRRRTFPVYNVAGRMIDFERRFPKYDSPGK 290



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
 Frame = -3

Query: 438 LLVKSMVSVAHSVLSARSKLLSCVSKIVGIIPVHVCRLCGEVHVGEFPHRIRSCEV---- 271
           LL   +   A   + A  K+    SK++    V  C  C EV VG   HR+R+C+     
Sbjct: 312 LLADDVQGFAIQGMEAWEKMWLGASKLMQKYAVQTCGYCSEVQVGPKGHRVRNCQAYKHQ 371

Query: 270 --AGSHSWGRGGIEHVLPLVESFHLYD-RLGRAVSHEERLLVDRIPAIVELCVQAGVDVP 100
              G H+W    ++ ++P V  +H+ D + G  + +  +    ++PA+VEL  QAG +V 
Sbjct: 372 MRDGQHAWQEATVDDLIPPVHVWHVRDVQDGGPLVNGLQRYYGKLPAVVELFAQAGANVG 431

Query: 99  E 97
           E
Sbjct: 432 E 432


>ref|XP_002263886.1| PREDICTED: APO protein 3, mitochondrial-like [Vitis vinifera]
          Length = 481

 Score =  266 bits (681), Expect = 2e-69
 Identities = 135/238 (56%), Positives = 171/238 (71%), Gaps = 18/238 (7%)
 Frame = -3

Query: 660 LVPMLSRASRRFIKRSSFGTLAH-------------GSDHVDLPARHRRSERKPLVTAIN 520
           ++P   R  R+ + ++SF +L                S   +LP + ++SERKP VT++N
Sbjct: 80  MLPRRIRNLRKIVVQNSFASLIELGKFKLPFRSFSTNSTCKELPRKLKKSERKPWVTSVN 139

Query: 519 ELKHCARLQRKTRQDVREIPLRAPENGLLVKSMVSVAHSVLSARSKLLSCVSKIVGIIPV 340
           ELK  ARLQ++ RQ+V EI LR PENGLLVK +V  AH V +AR+KL +CVS +V    +
Sbjct: 140 ELKCKARLQKQARQEVSEITLRPPENGLLVKGLVPFAHEVYAARAKLFTCVSMVVKSTII 199

Query: 339 HVCRLCGEVHVGEFPHRIRSCEVAGS-----HSWGRGGIEHVLPLVESFHLYDRLGRAVS 175
           + CRLCGEVHVG  PH+IR+C V GS     H W  GG+EHVLPLVESFHLYDRLGRAVS
Sbjct: 200 YSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHVWEIGGVEHVLPLVESFHLYDRLGRAVS 259

Query: 174 HEERLLVDRIPAIVELCVQAGVDVPEYPTKRRVIPVYNIAGKMIDFEKKFPRDYSSGK 1
           H ERL VD+IPAIVELC+QAG+D+PEYPT+RR  PVYN+AG+MIDFE++FP+  S GK
Sbjct: 260 HNERLQVDQIPAIVELCIQAGLDIPEYPTRRRTFPVYNVAGRMIDFERRFPKYDSPGK 317



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
 Frame = -3

Query: 438 LLVKSMVSVAHSVLSARSKLLSCVSKIVGIIPVHVCRLCGEVHVGEFPHRIRSCEV---- 271
           LL   +   A   + A  K+    SK++    V  C  C EV VG   HR+R+C+     
Sbjct: 339 LLADDVQGFAIQGMEAWEKMWLGASKLMQKYAVQTCGYCSEVQVGPKGHRVRNCQAYKHQ 398

Query: 270 --AGSHSWGRGGIEHVLPLVESFHLYD-RLGRAVSHEERLLVDRIPAIVELCVQAGVDVP 100
              G H+W    ++ ++P V  +H+ D + G  + +  +    ++PA+VEL  QAG +V 
Sbjct: 399 MRDGQHAWQEATVDDLIPPVHVWHVRDVQDGGPLVNGLQRYYGKLPAVVELFAQAGANVG 458

Query: 99  E 97
           E
Sbjct: 459 E 459


>emb|CAN78766.1| hypothetical protein VITISV_044397 [Vitis vinifera]
          Length = 805

 Score =  266 bits (681), Expect = 2e-69
 Identities = 135/238 (56%), Positives = 171/238 (71%), Gaps = 18/238 (7%)
 Frame = -3

Query: 660  LVPMLSRASRRFIKRSSFGTLAH-------------GSDHVDLPARHRRSERKPLVTAIN 520
            ++P   R  R+ + ++SF +L                S   +LP + ++SERKP VT++N
Sbjct: 390  MLPRRIRNLRKIVVQNSFASLIELGKFKLPXRXFSTNSXCKELPRKLKKSERKPWVTSVN 449

Query: 519  ELKHCARLQRKTRQDVREIPLRAPENGLLVKSMVSVAHSVLSARSKLLSCVSKIVGIIPV 340
            ELK  ARLQ++ RQ+V EI LR PENGLLVK +V  AH V +AR+KL +CVS +V    +
Sbjct: 450  ELKCKARLQKQARQEVSEITLRPPENGLLVKGLVPFAHEVYAARAKLFTCVSMVVKSTII 509

Query: 339  HVCRLCGEVHVGEFPHRIRSCEVAGS-----HSWGRGGIEHVLPLVESFHLYDRLGRAVS 175
            + CRLCGEVHVG  PH+IR+C V GS     H W  GG+EHVLPLVESFHLYDRLGRAVS
Sbjct: 510  YSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHVWEIGGVEHVLPLVESFHLYDRLGRAVS 569

Query: 174  HEERLLVDRIPAIVELCVQAGVDVPEYPTKRRVIPVYNIAGKMIDFEKKFPRDYSSGK 1
            H ERL VD+IPAIVELC+QAG+D+PEYPT+RR  PVYN+AG+MIDFE++FP+  S GK
Sbjct: 570  HNERLQVDQIPAIVELCIQAGLDIPEYPTRRRTFPVYNVAGRMIDFERRFPKYDSPGK 627


>ref|XP_002518315.1| APO protein 3, mitochondrial precursor, putative [Ricinus communis]
           gi|223542535|gb|EEF44075.1| APO protein 3, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 390

 Score =  261 bits (667), Expect = 9e-68
 Identities = 126/202 (62%), Positives = 160/202 (79%), Gaps = 5/202 (2%)
 Frame = -3

Query: 591 GSDHVDLPARHRRSERKPLVTAINELKHCARLQRKTRQDVREIPLRAPENGLLVKSMVSV 412
           GS +V+LP + ++SERKP VT++NELK  AR +RK RQ VRE  LR PENGLLVK ++ V
Sbjct: 24  GSTYVELPRKLKKSERKPWVTSVNELKRKAREERKDRQLVRERILRPPENGLLVKELIPV 83

Query: 411 AHSVLSARSKLLSCVSKIVGIIPVHVCRLCGEVHVGEFPHRIRSCEVAGS-----HSWGR 247
           AH V SAR +LLSCVSK+V  I V+ C +CGEVHVG  PH+IR+C V GS     H W  
Sbjct: 84  AHEVYSARMELLSCVSKVVESIAVYSCSVCGEVHVGHPPHKIRTCNVIGSQANKEHMWNI 143

Query: 246 GGIEHVLPLVESFHLYDRLGRAVSHEERLLVDRIPAIVELCVQAGVDVPEYPTKRRVIPV 67
           GG+E+VLPLVESFHLYDRLGRAVSH ER+ VDRIPAI+ELC+Q GV++PEYPT+RR  P 
Sbjct: 144 GGMENVLPLVESFHLYDRLGRAVSHNERIQVDRIPAIMELCIQGGVNIPEYPTRRRAFPA 203

Query: 66  YNIAGKMIDFEKKFPRDYSSGK 1
           Y++AG+++DFE++FP++ + GK
Sbjct: 204 YSVAGRIMDFERRFPKEDAPGK 225


>ref|XP_003537145.1| PREDICTED: APO protein 3, mitochondrial-like [Glycine max]
          Length = 404

 Score =  253 bits (646), Expect = 3e-65
 Identities = 121/197 (61%), Positives = 154/197 (78%), Gaps = 5/197 (2%)
 Frame = -3

Query: 576 DLPARHRRSERKPLVTAINELKHCARLQRKTRQDVREIPLRAPENGLLVKSMVSVAHSVL 397
           +LP +  + ERKP VT+ NELK  ARL+RK RQ V E  L+ PENGLLV+ ++ +AH V 
Sbjct: 43  ELPRKLNKYERKPPVTSFNELKRQARLERKERQKVHENKLQPPENGLLVEHLIPIAHEVY 102

Query: 396 SARSKLLSCVSKIVGIIPVHVCRLCGEVHVGEFPHRIRSCEVAGS-----HSWGRGGIEH 232
           +AR +L+S VS++V  I ++ C LCGEVHVG  PH+IR+C+V GS     HSW +GG+EH
Sbjct: 103 AARCELISTVSRLVNYIAIYTCSLCGEVHVGHPPHQIRTCDVRGSPSSKEHSWVKGGVEH 162

Query: 231 VLPLVESFHLYDRLGRAVSHEERLLVDRIPAIVELCVQAGVDVPEYPTKRRVIPVYNIAG 52
           VLPLVESFHLYDR+GRAVSH E L VDRIPAIVELC+QAG D+PEYPT+RR  PVY +AG
Sbjct: 163 VLPLVESFHLYDRIGRAVSHNEMLEVDRIPAIVELCIQAGFDIPEYPTRRRSFPVYCVAG 222

Query: 51  KMIDFEKKFPRDYSSGK 1
           ++IDFEK+FP++ S G+
Sbjct: 223 RIIDFEKRFPKEISLGE 239


Top