BLASTX nr result

ID: Dioscorea21_contig00012168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012168
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556687.1| PREDICTED: protein GDAP2 homolog [Glycine max]     57   2e-06
ref|XP_003528562.1| PREDICTED: protein GDAP2 homolog [Glycine max]     56   3e-06
ref|XP_002312275.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_002336491.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_003556687.1| PREDICTED: protein GDAP2 homolog [Glycine max]
          Length = 557

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/37 (70%), Positives = 28/37 (75%)
 Frame = -3

Query: 112 MYRSVAAAGPTRGGLPSDSGDGVVTLDQVPRWIDADQ 2
           MY  VA +   RGGLP+DSGD VV LDQVPRW DADQ
Sbjct: 1   MYMPVATSATLRGGLPTDSGDSVVALDQVPRWNDADQ 37


>ref|XP_003528562.1| PREDICTED: protein GDAP2 homolog [Glycine max]
          Length = 498

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/37 (70%), Positives = 28/37 (75%)
 Frame = -3

Query: 112 MYRSVAAAGPTRGGLPSDSGDGVVTLDQVPRWIDADQ 2
           MY  VA +   RGGLP+DSGD VV LDQVPRW DADQ
Sbjct: 1   MYMPVATSAIQRGGLPTDSGDSVVALDQVPRWNDADQ 37


>ref|XP_002312275.1| predicted protein [Populus trichocarpa] gi|222852095|gb|EEE89642.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = -3

Query: 112 MYRSVAAAGPTRGGLPSDSGDGVVTLDQVPRWIDAD 5
           MY+ V AA  TRGG P+D+GD VVTLDQVPRW DA+
Sbjct: 1   MYQRVPAAVTTRGGSPTDNGDSVVTLDQVPRWSDAE 36


>ref|XP_002336491.1| predicted protein [Populus trichocarpa] gi|222835549|gb|EEE73984.1|
           predicted protein [Populus trichocarpa]
          Length = 107

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = -3

Query: 112 MYRSVAAAGPTRGGLPSDSGDGVVTLDQVPRWIDAD 5
           MY+ V AA  TRGG P+D+GD VVTLDQVPRW DA+
Sbjct: 1   MYQRVPAAVTTRGGSPTDNGDSVVTLDQVPRWSDAE 36


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