BLASTX nr result
ID: Dioscorea21_contig00012168
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00012168 (219 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003556687.1| PREDICTED: protein GDAP2 homolog [Glycine max] 57 2e-06 ref|XP_003528562.1| PREDICTED: protein GDAP2 homolog [Glycine max] 56 3e-06 ref|XP_002312275.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 ref|XP_002336491.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 >ref|XP_003556687.1| PREDICTED: protein GDAP2 homolog [Glycine max] Length = 557 Score = 57.0 bits (136), Expect = 2e-06 Identities = 26/37 (70%), Positives = 28/37 (75%) Frame = -3 Query: 112 MYRSVAAAGPTRGGLPSDSGDGVVTLDQVPRWIDADQ 2 MY VA + RGGLP+DSGD VV LDQVPRW DADQ Sbjct: 1 MYMPVATSATLRGGLPTDSGDSVVALDQVPRWNDADQ 37 >ref|XP_003528562.1| PREDICTED: protein GDAP2 homolog [Glycine max] Length = 498 Score = 56.2 bits (134), Expect = 3e-06 Identities = 26/37 (70%), Positives = 28/37 (75%) Frame = -3 Query: 112 MYRSVAAAGPTRGGLPSDSGDGVVTLDQVPRWIDADQ 2 MY VA + RGGLP+DSGD VV LDQVPRW DADQ Sbjct: 1 MYMPVATSAIQRGGLPTDSGDSVVALDQVPRWNDADQ 37 >ref|XP_002312275.1| predicted protein [Populus trichocarpa] gi|222852095|gb|EEE89642.1| predicted protein [Populus trichocarpa] Length = 561 Score = 55.1 bits (131), Expect = 6e-06 Identities = 25/36 (69%), Positives = 29/36 (80%) Frame = -3 Query: 112 MYRSVAAAGPTRGGLPSDSGDGVVTLDQVPRWIDAD 5 MY+ V AA TRGG P+D+GD VVTLDQVPRW DA+ Sbjct: 1 MYQRVPAAVTTRGGSPTDNGDSVVTLDQVPRWSDAE 36 >ref|XP_002336491.1| predicted protein [Populus trichocarpa] gi|222835549|gb|EEE73984.1| predicted protein [Populus trichocarpa] Length = 107 Score = 55.1 bits (131), Expect = 6e-06 Identities = 25/36 (69%), Positives = 29/36 (80%) Frame = -3 Query: 112 MYRSVAAAGPTRGGLPSDSGDGVVTLDQVPRWIDAD 5 MY+ V AA TRGG P+D+GD VVTLDQVPRW DA+ Sbjct: 1 MYQRVPAAVTTRGGSPTDNGDSVVTLDQVPRWSDAE 36