BLASTX nr result

ID: Dioscorea21_contig00011960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011960
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|2...   101   4e-19
ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267...   101   4e-19
ref|XP_004142729.1| PREDICTED: uncharacterized protein LOC101206...    95   4e-17
ref|XP_002309195.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-14
ref|XP_002528710.1| DNA binding protein, putative [Ricinus commu...    86   1e-14

>ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|222868313|gb|EEF05444.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score =  101 bits (251), Expect = 4e-19
 Identities = 78/194 (40%), Positives = 98/194 (50%), Gaps = 1/194 (0%)
 Frame = +2

Query: 26  GGRAQDLGSR**WRHRMAMNRIHRESLFGGGSARAGESMDGDENLDLFSRRRRTHLISSP 205
           GGR   +GS+    HR         SL GGG   + ++ + DENLDLFS+ RR+  ++S 
Sbjct: 27  GGRNIPVGSQ---YHRRG------HSLTGGG-VFSKDNHNKDENLDLFSKNRRSLSVASS 76

Query: 206 AESNGHGEMGKLDGLSVGSGKL-RSGLDDLMASELGKHDYDWLLTPPGTPLFSSLDASEP 382
            ES+      KL  LSVGS KL RSG+DDL++SE GKHDYDWLLTPPGTPLF S + SE 
Sbjct: 77  DESSDVSV--KLGRLSVGSAKLVRSGIDDLLSSEGGKHDYDWLLTPPGTPLFPSSEGSES 134

Query: 383 KITTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPARSVSAMRPS 562
           + T                                             RPARS S  RPS
Sbjct: 135 QPT------------LVAPRSSSLARSASTTKAASTLSVSQSESYHSSRPARSSSVTRPS 182

Query: 563 ISTTHPSSYLSSNS 604
           IS++  S+Y S+ S
Sbjct: 183 ISSSQYSTYSSNRS 196


>ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267210 [Vitis vinifera]
           gi|147841364|emb|CAN71240.1| hypothetical protein
           VITISV_034160 [Vitis vinifera]
           gi|296085846|emb|CBI31170.3| unnamed protein product
           [Vitis vinifera]
          Length = 570

 Score =  101 bits (251), Expect = 4e-19
 Identities = 77/188 (40%), Positives = 90/188 (47%), Gaps = 13/188 (6%)
 Frame = +2

Query: 80  MNRIHRESLFGG-----------GSARAGESMDGDENLDLFSRRRRTHLISSPAESNGHG 226
           MNR  +ES  G            G +  G   D DENLDLFSR RRT  + S  ES    
Sbjct: 1   MNRSFKESPAGPRTIPAVSHHRRGRSLTGMPRDADENLDLFSRNRRTLSVVSSEESEVPL 60

Query: 227 EMGKLDGLSVGSGKL-RSGLDDLMAS-ELGKHDYDWLLTPPGTPLFSSLDASEPKITTXX 400
           ++G+L   SVGS KL RSG+DDL++S E GKHDYDWLLTPPGTPLF S D +E + T   
Sbjct: 61  KLGRL---SVGSAKLARSGMDDLLSSVEGGKHDYDWLLTPPGTPLFPSSDGNESQPT--- 114

Query: 401 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPARSVSAMRPSISTTHP 580
                                                     RP RS S  RPSIST+  
Sbjct: 115 -----------MLAPRNSNLARSASTTKASRLSVAQSESSYSRPTRSSSVTRPSISTSQY 163

Query: 581 SSYLSSNS 604
           S+Y SS S
Sbjct: 164 STYSSSRS 171


>ref|XP_004142729.1| PREDICTED: uncharacterized protein LOC101206216 [Cucumis sativus]
          Length = 578

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 75/188 (39%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
 Frame = +2

Query: 80  MNRIHRESLFGG-----------GSARAGESMDGDENLDLFSRRRRTHLISSPAESNGHG 226
           MNR  RE L G            G +  G S D DENLDLFS+ RRT  +S  A  +   
Sbjct: 1   MNRNWREPLSGSRNAPLFSHHRRGHSFTGISRDSDENLDLFSKNRRT--LSVTASDDSSD 58

Query: 227 EMGKLDGLSVGSGKL-RSGLDDLMAS-ELGKHDYDWLLTPPGTPLFSSLDASEPKITTXX 400
              KL  LSVGS KL +SG+DDL++S E GKHDYDWLLTPPGTPLF S   SE + T   
Sbjct: 59  ASVKLGRLSVGSVKLAKSGIDDLLSSTEGGKHDYDWLLTPPGTPLFPSSSESEIQSTV-- 116

Query: 401 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPARSVSAMRPSISTTHP 580
                                                     RP RS S  R S+ST   
Sbjct: 117 -----------AAPRSSTLVRSSSTTKASRLSVSQSESNNPSRPVRSSSVSRSSVSTPQY 165

Query: 581 SSYLSSNS 604
           SSY S+ S
Sbjct: 166 SSYSSNRS 173


>ref|XP_002309195.1| predicted protein [Populus trichocarpa] gi|222855171|gb|EEE92718.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
 Frame = +2

Query: 113 GGSARAGESMDGDENLDLFSRRRRTHLISSPAESNGHGEMGKLDGLSVGSGKL-RSGLDD 289
           GG   +  +   DENLDLFS+ RR   +SS   S+      KL+ L+VGS K  RSG+DD
Sbjct: 14  GGGGFSKNNNGTDENLDLFSKNRRGLSVSSDESSD---VSVKLERLAVGSAKFARSGIDD 70

Query: 290 LMAS-ELGKHDYDWLLTPPGTPLFSSLDASEPKITTXXXXXXXXXXXXXXXXXXXXXXXX 466
           L++S E GKHDYDWLLTPPGTPL    + SE K T+                        
Sbjct: 71  LLSSTEGGKHDYDWLLTPPGTPLSPPSEGSESKPTS------------VAPRSSSLARST 118

Query: 467 XXXXXXXXXXXXXXXXXXXXRPARSVSAMRPSISTTHPSSYLSSNS 604
                               RP RS S  RPSIS++  S+Y S+ S
Sbjct: 119 STTKAVSRLSVSQSESYHSSRPTRSSSVTRPSISSSQYSTYSSNRS 164


>ref|XP_002528710.1| DNA binding protein, putative [Ricinus communis]
           gi|223531882|gb|EEF33699.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 580

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 52/104 (50%), Positives = 69/104 (66%), Gaps = 10/104 (9%)
 Frame = +2

Query: 110 GGGSARAGESMDG--------DENLDLFSRRRRTHLISSPAESNGHGEMGKLDGLSVGSG 265
           G  S R G S++G        DENLDLFS+ RR+  ++S  ES+      KL  +SVGS 
Sbjct: 29  GSFSHRRGHSLNGFSSKDTTTDENLDLFSKNRRSLSVASSDESSDVSM--KLGRVSVGSA 86

Query: 266 KL-RSGLDDLMAS-ELGKHDYDWLLTPPGTPLFSSLDASEPKIT 391
           K+ +SG+DDL++S + GKHDYDWLLTPPGTPLF + D S+ + T
Sbjct: 87  KVAKSGIDDLLSSTDGGKHDYDWLLTPPGTPLFPTSDGSDSQPT 130


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