BLASTX nr result
ID: Dioscorea21_contig00011595
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00011595 (229 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_182025.2| SNF2 and helicase domain-containing protein [Ar... 93 2e-17 pir||T00395 hypothetical protein T13E15.1 - Arabidopsis thaliana... 93 2e-17 ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arab... 93 2e-17 ref|NP_973689.2| SNF2 and helicase domain-containing protein [Ar... 93 2e-17 ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding... 89 4e-16 >ref|NP_182025.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gi|330255398|gb|AEC10492.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 851 Score = 93.2 bits (230), Expect = 2e-17 Identities = 47/76 (61%), Positives = 53/76 (69%) Frame = +1 Query: 1 LHLIHLTSLDGDSNXXXXXXXXXXXXXXQSYNPRRKVPRSNISMPDLERCLAKASFTAAQ 180 LHLI + D N QSYN RRKVPRS+IS+PDLE CLAKASF+A+Q Sbjct: 751 LHLIKIDDNDDQQNTQASKPLWVAVAVTQSYNSRRKVPRSSISIPDLESCLAKASFSASQ 810 Query: 181 KSASIHMPRIGYQDGS 228 KSAS+HMPRIGYQDGS Sbjct: 811 KSASLHMPRIGYQDGS 826 >pir||T00395 hypothetical protein T13E15.1 - Arabidopsis thaliana (fragment) Length = 186 Score = 93.2 bits (230), Expect = 2e-17 Identities = 47/76 (61%), Positives = 53/76 (69%) Frame = +1 Query: 1 LHLIHLTSLDGDSNXXXXXXXXXXXXXXQSYNPRRKVPRSNISMPDLERCLAKASFTAAQ 180 LHLI + D N QSYN RRKVPRS+IS+PDLE CLAKASF+A+Q Sbjct: 86 LHLIKIDDNDDQQNTQASKPLWVAVAVTQSYNSRRKVPRSSISIPDLESCLAKASFSASQ 145 Query: 181 KSASIHMPRIGYQDGS 228 KSAS+HMPRIGYQDGS Sbjct: 146 KSASLHMPRIGYQDGS 161 >ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp. lyrata] gi|297327832|gb|EFH58252.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp. lyrata] Length = 873 Score = 93.2 bits (230), Expect = 2e-17 Identities = 47/76 (61%), Positives = 53/76 (69%) Frame = +1 Query: 1 LHLIHLTSLDGDSNXXXXXXXXXXXXXXQSYNPRRKVPRSNISMPDLERCLAKASFTAAQ 180 LHLI + N QSYNPRRKVPRS+IS+PDLE CLAKASF+A+Q Sbjct: 766 LHLIKIDDSYDQQNTEESKPLWVAVAVTQSYNPRRKVPRSSISIPDLESCLAKASFSASQ 825 Query: 181 KSASIHMPRIGYQDGS 228 KSAS+HMPRIGYQDGS Sbjct: 826 KSASLHMPRIGYQDGS 841 >ref|NP_973689.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gi|330255399|gb|AEC10493.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 877 Score = 93.2 bits (230), Expect = 2e-17 Identities = 47/76 (61%), Positives = 53/76 (69%) Frame = +1 Query: 1 LHLIHLTSLDGDSNXXXXXXXXXXXXXXQSYNPRRKVPRSNISMPDLERCLAKASFTAAQ 180 LHLI + D N QSYN RRKVPRS+IS+PDLE CLAKASF+A+Q Sbjct: 770 LHLIKIDDNDDQQNTQASKPLWVAVAVTQSYNSRRKVPRSSISIPDLESCLAKASFSASQ 829 Query: 181 KSASIHMPRIGYQDGS 228 KSAS+HMPRIGYQDGS Sbjct: 830 KSASLHMPRIGYQDGS 845 >ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis vinifera] Length = 876 Score = 89.0 bits (219), Expect = 4e-16 Identities = 43/48 (89%), Positives = 45/48 (93%) Frame = +1 Query: 85 QSYNPRRKVPRSNISMPDLERCLAKASFTAAQKSASIHMPRIGYQDGS 228 QSYNPRRKVPRSNIS+PDLE CL+KASF AAQKSASIHMPRIGYQD S Sbjct: 800 QSYNPRRKVPRSNISVPDLECCLSKASFLAAQKSASIHMPRIGYQDRS 847