BLASTX nr result

ID: Dioscorea21_contig00011595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011595
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_182025.2| SNF2 and helicase domain-containing protein [Ar...    93   2e-17
pir||T00395 hypothetical protein T13E15.1 - Arabidopsis thaliana...    93   2e-17
ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arab...    93   2e-17
ref|NP_973689.2| SNF2 and helicase domain-containing protein [Ar...    93   2e-17
ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...    89   4e-16

>ref|NP_182025.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
           gi|330255398|gb|AEC10492.1| SNF2 and helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 851

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = +1

Query: 1   LHLIHLTSLDGDSNXXXXXXXXXXXXXXQSYNPRRKVPRSNISMPDLERCLAKASFTAAQ 180
           LHLI +   D   N              QSYN RRKVPRS+IS+PDLE CLAKASF+A+Q
Sbjct: 751 LHLIKIDDNDDQQNTQASKPLWVAVAVTQSYNSRRKVPRSSISIPDLESCLAKASFSASQ 810

Query: 181 KSASIHMPRIGYQDGS 228
           KSAS+HMPRIGYQDGS
Sbjct: 811 KSASLHMPRIGYQDGS 826


>pir||T00395 hypothetical protein T13E15.1 - Arabidopsis thaliana  (fragment)
          Length = 186

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = +1

Query: 1   LHLIHLTSLDGDSNXXXXXXXXXXXXXXQSYNPRRKVPRSNISMPDLERCLAKASFTAAQ 180
           LHLI +   D   N              QSYN RRKVPRS+IS+PDLE CLAKASF+A+Q
Sbjct: 86  LHLIKIDDNDDQQNTQASKPLWVAVAVTQSYNSRRKVPRSSISIPDLESCLAKASFSASQ 145

Query: 181 KSASIHMPRIGYQDGS 228
           KSAS+HMPRIGYQDGS
Sbjct: 146 KSASLHMPRIGYQDGS 161


>ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp.
           lyrata] gi|297327832|gb|EFH58252.1| hypothetical protein
           ARALYDRAFT_483627 [Arabidopsis lyrata subsp. lyrata]
          Length = 873

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = +1

Query: 1   LHLIHLTSLDGDSNXXXXXXXXXXXXXXQSYNPRRKVPRSNISMPDLERCLAKASFTAAQ 180
           LHLI +       N              QSYNPRRKVPRS+IS+PDLE CLAKASF+A+Q
Sbjct: 766 LHLIKIDDSYDQQNTEESKPLWVAVAVTQSYNPRRKVPRSSISIPDLESCLAKASFSASQ 825

Query: 181 KSASIHMPRIGYQDGS 228
           KSAS+HMPRIGYQDGS
Sbjct: 826 KSASLHMPRIGYQDGS 841


>ref|NP_973689.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
           gi|330255399|gb|AEC10493.1| SNF2 and helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 877

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = +1

Query: 1   LHLIHLTSLDGDSNXXXXXXXXXXXXXXQSYNPRRKVPRSNISMPDLERCLAKASFTAAQ 180
           LHLI +   D   N              QSYN RRKVPRS+IS+PDLE CLAKASF+A+Q
Sbjct: 770 LHLIKIDDNDDQQNTQASKPLWVAVAVTQSYNSRRKVPRSSISIPDLESCLAKASFSASQ 829

Query: 181 KSASIHMPRIGYQDGS 228
           KSAS+HMPRIGYQDGS
Sbjct: 830 KSASLHMPRIGYQDGS 845


>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
           vinifera]
          Length = 876

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = +1

Query: 85  QSYNPRRKVPRSNISMPDLERCLAKASFTAAQKSASIHMPRIGYQDGS 228
           QSYNPRRKVPRSNIS+PDLE CL+KASF AAQKSASIHMPRIGYQD S
Sbjct: 800 QSYNPRRKVPRSNISVPDLECCLSKASFLAAQKSASIHMPRIGYQDRS 847


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