BLASTX nr result

ID: Dioscorea21_contig00011493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011493
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002467993.1| hypothetical protein SORBIDRAFT_01g037740 [S...   197   6e-49
ref|XP_003558100.1| PREDICTED: anaphase-promoting complex subuni...   194   9e-48
ref|NP_001049871.1| Os03g0302700 [Oryza sativa Japonica Group] g...   192   3e-47
gb|AFK43889.1| unknown [Lotus japonicus]                              191   4e-47
ref|NP_001152621.1| LOC100286262 [Zea mays] gi|226958525|ref|NP_...   191   4e-47

>ref|XP_002467993.1| hypothetical protein SORBIDRAFT_01g037740 [Sorghum bicolor]
           gi|241921847|gb|EER94991.1| hypothetical protein
           SORBIDRAFT_01g037740 [Sorghum bicolor]
          Length = 89

 Score =  197 bits (502), Expect = 6e-49
 Identities = 81/87 (93%), Positives = 84/87 (96%)
 Frame = +3

Query: 96  GDTMKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGACNHSFHL 275
           G+TMKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGACNH++HL
Sbjct: 3   GNTMKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGACNHAYHL 62

Query: 276 HCILKWVNSQTPQPHCPMCRREWQFKG 356
           HCILKWVNSQT  P CPMCRREWQFKG
Sbjct: 63  HCILKWVNSQTSTPLCPMCRREWQFKG 89


>ref|XP_003558100.1| PREDICTED: anaphase-promoting complex subunit 11-like [Brachypodium
           distachyon]
          Length = 84

 Score =  194 bits (492), Expect = 9e-48
 Identities = 79/84 (94%), Positives = 81/84 (96%)
 Frame = +3

Query: 105 MKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGACNHSFHLHCI 284
           MKVK+LQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGACNH+FHLHCI
Sbjct: 1   MKVKVLQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGACNHAFHLHCI 60

Query: 285 LKWVNSQTPQPHCPMCRREWQFKG 356
           LKWVNSQT  P CPMCRREWQFKG
Sbjct: 61  LKWVNSQTSTPLCPMCRREWQFKG 84


>ref|NP_001049871.1| Os03g0302700 [Oryza sativa Japonica Group]
           gi|113548342|dbj|BAF11785.1| Os03g0302700 [Oryza sativa
           Japonica Group] gi|218192646|gb|EEC75073.1| hypothetical
           protein OsI_11204 [Oryza sativa Indica Group]
           gi|222624769|gb|EEE58901.1| hypothetical protein
           OsJ_10533 [Oryza sativa Japonica Group]
          Length = 84

 Score =  192 bits (487), Expect = 3e-47
 Identities = 78/84 (92%), Positives = 81/84 (96%)
 Frame = +3

Query: 105 MKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGACNHSFHLHCI 284
           MKVKILQWH+VASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWG+CNH+FHLHCI
Sbjct: 1   MKVKILQWHSVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGSCNHAFHLHCI 60

Query: 285 LKWVNSQTPQPHCPMCRREWQFKG 356
           LKWVNSQT  P CPMCRREWQFKG
Sbjct: 61  LKWVNSQTSTPLCPMCRREWQFKG 84


>gb|AFK43889.1| unknown [Lotus japonicus]
          Length = 84

 Score =  191 bits (486), Expect = 4e-47
 Identities = 78/84 (92%), Positives = 79/84 (94%)
 Frame = +3

Query: 105 MKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGACNHSFHLHCI 284
           MKV ILQWHAVASWTWDAQDETCGICRMAFDGCCPDCK PGDDCPLIWGACNH+FHLHCI
Sbjct: 1   MKVNILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 60

Query: 285 LKWVNSQTPQPHCPMCRREWQFKG 356
           LKWVNSQ  Q HCPMCRREWQFKG
Sbjct: 61  LKWVNSQASQAHCPMCRREWQFKG 84


>ref|NP_001152621.1| LOC100286262 [Zea mays] gi|226958525|ref|NP_001152943.1|
           anaphase-promoting complex subunit 11 [Zea mays]
           gi|195636462|gb|ACG37699.1| anaphase-promoting complex
           subunit 11 [Zea mays] gi|195658283|gb|ACG48609.1|
           anaphase-promoting complex subunit 11 [Zea mays]
           gi|414866413|tpg|DAA44970.1| TPA: putative RING zinc
           finger domain superfamily protein [Zea mays]
          Length = 84

 Score =  191 bits (486), Expect = 4e-47
 Identities = 78/84 (92%), Positives = 80/84 (95%)
 Frame = +3

Query: 105 MKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGACNHSFHLHCI 284
           MKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWG CNH++HLHCI
Sbjct: 1   MKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGVCNHAYHLHCI 60

Query: 285 LKWVNSQTPQPHCPMCRREWQFKG 356
           LKWVNSQT  P CPMCRREWQFKG
Sbjct: 61  LKWVNSQTSTPLCPMCRREWQFKG 84


Top