BLASTX nr result

ID: Dioscorea21_contig00011486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011486
         (1978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like...   237   1e-59
ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like...   226   1e-56
ref|XP_002313823.1| predicted protein [Populus trichocarpa] gi|2...   226   2e-56
ref|XP_002281140.2| PREDICTED: RING-H2 finger protein ATL65-like...   224   7e-56
ref|XP_003539029.1| PREDICTED: RING-H2 finger protein ATL65-like...   223   2e-55

>ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus]
            gi|449472703|ref|XP_004153673.1| PREDICTED: RING-H2
            finger protein ATL65-like [Cucumis sativus]
            gi|449532533|ref|XP_004173235.1| PREDICTED: RING-H2
            finger protein ATL65-like [Cucumis sativus]
          Length = 421

 Score =  237 bits (604), Expect = 1e-59
 Identities = 142/296 (47%), Positives = 162/296 (54%), Gaps = 21/296 (7%)
 Frame = -1

Query: 1642 SPFGLDDAAIXXXXXXXXXXXXXXXXPIRDCAVCLFEFEDGDSLRTLPACSHAFHVDCID 1463
            SP+GLD++ I                  R+CAVCL EFED D +RTLP CSHAFHVDCID
Sbjct: 139  SPYGLDESVIKTIPLSVYTAKSRD----RECAVCLLEFEDDDYVRTLPICSHAFHVDCID 194

Query: 1462 VWLRSHASCPLCRAGIFRPDSPFIPMRAARIRPSLDDLIFD----QPPDLVSPIPESDNP 1295
            VWLRSHA+CPLCRA +FRP+SPF P+ AARIRPSLDD I      +P     PIP  D+ 
Sbjct: 195  VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPLAEGPPIPNRDSY 254

Query: 1294 EIALATASPITAAP-----------AHDFLLKRSYSFGFERSLAADRMVLEASTASPWRY 1148
                +  +P    P             DFLLKRSYSFGFERSLA++RM+LE +T SPWRY
Sbjct: 255  HATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERMILEPATTSPWRY 314

Query: 1147 RHRSFWSKRWXXXXXXXXXXXXXXXXXXXXXSYRGVSSVKSPFLRRR-GFFPLS-----L 986
            R  SFWSKR                       YRG   +KSPF RRR GFFPLS      
Sbjct: 315  RRGSFWSKR------PSPFGSLPKARVFSFRYYRG---MKSPFFRRRGGFFPLSESSWRF 365

Query: 985  ESSVXXXXXXXXXXXXXXXXXXXXXXXXAQGWGFSSSRMRCGDPEALLSPERLNRR 818
             + V                             FSSSR+RCGDPEALLSPER NRR
Sbjct: 366  SNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 421


>ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
          Length = 393

 Score =  226 bits (577), Expect = 1e-56
 Identities = 143/302 (47%), Positives = 162/302 (53%), Gaps = 27/302 (8%)
 Frame = -1

Query: 1642 SPFGLDDAAIXXXXXXXXXXXXXXXXPIR--DCAVCLFEFEDGDSLRTLPACSHAFHVDC 1469
            SP+GLD+  I                     DCAVCL EFED D +RTLP CSH FHVDC
Sbjct: 102  SPYGLDETVIKTIPFSLYTAKYDARFDESRYDCAVCLLEFEDEDYVRTLPVCSHTFHVDC 161

Query: 1468 IDVWLRSHASCPLCRAGIFRPDSPFIPMRAARIRPSLDD--LIFDQPPDLVSPIPESDNP 1295
            ID WLRSHA+CPLCRAG+   DSPF PM AARIRPSLDD  ++     D +  +P     
Sbjct: 162  IDAWLRSHANCPLCRAGVLCTDSPFTPMMAARIRPSLDDDTILHRISIDPLIDLPPQPAS 221

Query: 1294 EIALATASPITAAP-------------------AHDFLLKRSYSFGFERSLAADRMVLEA 1172
             +A+++ S IT                        DFLLKRSYSFGFERSLA++RMV+E 
Sbjct: 222  AVAISSVSEITPCVDENTPRRNQNHANVNSEDCFRDFLLKRSYSFGFERSLASERMVMEP 281

Query: 1171 STASPWRYRH--RSFWSKRWXXXXXXXXXXXXXXXXXXXXXSYRGVSSVKSPFLRRRGFF 998
            +TASPWRYR    SFWSKR                       YRG   +KSPF RRRGFF
Sbjct: 282  ATASPWRYRRGSSSFWSKR------PSPFGSLGKPRVFSFRYYRG---MKSPFFRRRGFF 332

Query: 997  PLSLESSV--XXXXXXXXXXXXXXXXXXXXXXXXAQGWGFSSSRMRCGDPEALLSPERLN 824
            PLS ESSV                          A    FSSSR+RCGDPEALLSPER N
Sbjct: 333  PLS-ESSVRYGSGGSSSRRSKSIASPMFLRSSGVAAAAAFSSSRLRCGDPEALLSPERFN 391

Query: 823  RR 818
            RR
Sbjct: 392  RR 393


>ref|XP_002313823.1| predicted protein [Populus trichocarpa] gi|222850231|gb|EEE87778.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  226 bits (575), Expect = 2e-56
 Identities = 144/312 (46%), Positives = 166/312 (53%), Gaps = 37/312 (11%)
 Frame = -1

Query: 1642 SPFGLDDAAIXXXXXXXXXXXXXXXXP--IRDCAVCLFEFEDGDSLRTLPACSHAFHVDC 1469
            SP+GLDDA I                   I+DCAVCL EFED + +RTLP CSHAFHVDC
Sbjct: 65   SPYGLDDAVIKTIPLSLYTTKNSNSFHKQIKDCAVCLLEFEDDEYVRTLPVCSHAFHVDC 124

Query: 1468 IDVWLRSHASCPLCRAGIFRPDSPFIPMRAARIRPSLDDLIFDQ-----PPDLVSPI-PE 1307
            ID+WLRSHA+CPLCRAGIFR +SPFIP+ AARIRPSLD+ I         P + SP+   
Sbjct: 125  IDIWLRSHANCPLCRAGIFRAESPFIPVMAARIRPSLDETILRSTLLPLEPIIQSPLRTY 184

Query: 1306 SDNPEIALATASPITAAPAH-----------------------DFLLKRSYSFGFERSLA 1196
            S   + A AT + IT  P                          F LKRSYSFGFERSLA
Sbjct: 185  SAVADTATATVTEITPCPEEPSPRRHSMNNFNTNSEDRFNGRDHFFLKRSYSFGFERSLA 244

Query: 1195 ADRM-VLEASTASPWRYRHRSFWSKRWXXXXXXXXXXXXXXXXXXXXXSYRGVSSVKSPF 1019
            ++RM V+E +TASPWR+R   FWSKR                      S+R    +KSPF
Sbjct: 245  SERMLVMEPATASPWRFRRGVFWSKR---------PSPFGSISKARVFSFRHYRGMKSPF 295

Query: 1018 LRRR--GFFPLSLESSVXXXXXXXXXXXXXXXXXXXXXXXXAQG---WGFSSSRMRCGDP 854
             RRR  GFFPLS   S                         + G     FSSSR+RCGDP
Sbjct: 296  FRRRGSGFFPLSERFSTVGGGGGGGSSRRCKSMASPQFLRSSVGSSMAAFSSSRLRCGDP 355

Query: 853  EALLSPERLNRR 818
            EALLSPER NRR
Sbjct: 356  EALLSPERFNRR 367


>ref|XP_002281140.2| PREDICTED: RING-H2 finger protein ATL65-like [Vitis vinifera]
          Length = 396

 Score =  224 bits (571), Expect = 7e-56
 Identities = 135/289 (46%), Positives = 160/289 (55%), Gaps = 14/289 (4%)
 Frame = -1

Query: 1642 SPFGLDDAAIXXXXXXXXXXXXXXXXPI----RDCAVCLFEFEDGDSLRTLPACSHAFHV 1475
            SP+GLD++ I                      RDCAVCL EFED D +R LP CSHAFHV
Sbjct: 121  SPYGLDESVIKTIPLSLYTAKGLSKHGFVDDSRDCAVCLLEFEDNDCVRVLPVCSHAFHV 180

Query: 1474 DCIDVWLRSHASCPLCRAGIFRPDSPFIPMRAARIRPSLDDLIFD----QPPDLVSPIPE 1307
            DCID+WLRSHA+CPLCRAGIFR +SPFIP+ AARIRPSLDD I +    +P    +P  E
Sbjct: 181  DCIDIWLRSHANCPLCRAGIFRHESPFIPVMAARIRPSLDDAILESILLEPLSEAAPESE 240

Query: 1306 SDNPEIALATASPITAAP-----AHDFLLKRSYSFGFERSLAADRMVLEASTASPWRYRH 1142
            +   EI  A  SP          A DF+LKRSYSFGFER+  ++R+V+E +TASPWRYR 
Sbjct: 241  TTVTEIVPAEPSPRRNQSEDRFNARDFMLKRSYSFGFERNFPSERLVMEPATASPWRYRR 300

Query: 1141 RSFWSKRWXXXXXXXXXXXXXXXXXXXXXSYRGVSSVKSPFLRRRG-FFPLSLESSVXXX 965
             SFWSKR                       YRG   +KSPF RRRG FFPLS   +    
Sbjct: 301  GSFWSKR------PSPFGSLTKSRVFSFRYYRG---MKSPFFRRRGSFFPLSESHA---- 347

Query: 964  XXXXXXXXXXXXXXXXXXXXXAQGWGFSSSRMRCGDPEALLSPERLNRR 818
                                 +     +S+R+RC D EALLSPER NRR
Sbjct: 348  RFSGGGSSRRTKSLTSPIFIRSSATASASTRLRCRDLEALLSPERFNRR 396


>ref|XP_003539029.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
          Length = 399

 Score =  223 bits (567), Expect = 2e-55
 Identities = 142/304 (46%), Positives = 162/304 (53%), Gaps = 29/304 (9%)
 Frame = -1

Query: 1642 SPFGLDDAAIXXXXXXXXXXXXXXXXPI--RDCAVCLFEFEDGDSLRTLPACSHAFHVDC 1469
            SP+GLD+  I                     DCAVCL EFED D +RTLP CSH FHVDC
Sbjct: 106  SPYGLDETVIKTIPFSLYTAKYDARFDESRNDCAVCLLEFEDDDYVRTLPICSHTFHVDC 165

Query: 1468 IDVWLRSHASCPLCRAGIFRPDSPFIPMRAARIRPSLDD------LIFD---QPPDL--- 1325
            ID WLRSHA+CPLCRAG+   DSPF PM AARIRPS DD      +  D    PP L   
Sbjct: 166  IDAWLRSHANCPLCRAGVLCTDSPFTPMMAARIRPSFDDDTILHRISIDPLIDPPLLPAA 225

Query: 1324 -------VSPIPESDNPEIALATASPITAAPAHDFLLKRSYSFGFERSLAADRMVLEAST 1166
                   ++P  + ++P      A+  +     DFLLKRSYSFGFERSLA++RMV+E +T
Sbjct: 226  AISSVPEITPCVDENSPRRNQNHANVNSEDCFRDFLLKRSYSFGFERSLASERMVMEPAT 285

Query: 1165 ASPWRYRH--RSFWSKRWXXXXXXXXXXXXXXXXXXXXXSYRGVSSVKSPFLRRRGFFPL 992
            ASPWRYR    SFWSKR                       YRG   +KSPF RRRGFFPL
Sbjct: 286  ASPWRYRRGSSSFWSKR------PSPFGSLGKPRVFSFRYYRG---MKSPFFRRRGFFPL 336

Query: 991  SLESSVXXXXXXXXXXXXXXXXXXXXXXXXAQGWG------FSSSRMRCGDPEALLSPER 830
            S ESSV                         +  G      FSSSR+RCGDPEALLSPER
Sbjct: 337  S-ESSVRYGGGGGGGGSSSRRSKSIASPMFLRSSGVTSAAAFSSSRLRCGDPEALLSPER 395

Query: 829  LNRR 818
             N R
Sbjct: 396  FNGR 399


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