BLASTX nr result

ID: Dioscorea21_contig00011439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011439
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299079.1| predicted protein [Populus trichocarpa] gi|2...   268   4e-70
ref|XP_002525241.1| WD-repeat protein, putative [Ricinus communi...   267   9e-70
ref|XP_002330572.1| predicted protein [Populus trichocarpa] gi|2...   266   2e-69
ref|NP_001047961.1| Os02g0721600 [Oryza sativa Japonica Group] g...   264   6e-69
ref|XP_002264198.1| PREDICTED: uncharacterized WD repeat-contain...   263   1e-68

>ref|XP_002299079.1| predicted protein [Populus trichocarpa] gi|222846337|gb|EEE83884.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  268 bits (685), Expect = 4e-70
 Identities = 128/179 (71%), Positives = 150/179 (83%)
 Frame = -3

Query: 538 DCKPSKKGGLFYDFQRNTRSVKSTILHFQLRNLVWATTKHDVYLMSHFSVLHWSAITXXX 359
           DCK +KKGGL+Y+F+RN+RSVKSTILHFQLRNLVWATTKHDVYLMS+FSV HWS++T   
Sbjct: 103 DCKITKKGGLYYEFRRNSRSVKSTILHFQLRNLVWATTKHDVYLMSNFSVTHWSSLTC-- 160

Query: 358 XXXXXXXXXXSEKCEIMNLSGHVAPSEKHPGSLLEGFVQTQVSSLAVKNNLVVVGGFQGE 179
                       K +++++SGHVAP+EKHPGSLLEGF QTQVS+LAVK NL+V GGFQGE
Sbjct: 161 -----------SKSDVLDVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKGNLLVAGGFQGE 209

Query: 178 LICKALDRKGISFCCRMTYNDNSITNALEIYDSASGAPHFVASNNDCSVRDYDMEKFQL 2
           LICK LDR G+SFC R TY+DN+ITNA+EIYDS SGA HF ASNNDC VRD+DMEK+QL
Sbjct: 210 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYDSPSGAVHFTASNNDCGVRDFDMEKYQL 268


>ref|XP_002525241.1| WD-repeat protein, putative [Ricinus communis]
           gi|223535538|gb|EEF37207.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 438

 Score =  267 bits (682), Expect = 9e-70
 Identities = 124/179 (69%), Positives = 150/179 (83%)
 Frame = -3

Query: 538 DCKPSKKGGLFYDFQRNTRSVKSTILHFQLRNLVWATTKHDVYLMSHFSVLHWSAITXXX 359
           +CKP+KKGG +Y+F RNTRSV STILHFQLRNLVW+TTKHDVYLMSHFS++HWS+++   
Sbjct: 96  ECKPTKKGGAYYEFWRNTRSVTSTILHFQLRNLVWSTTKHDVYLMSHFSIIHWSSLSC-- 153

Query: 358 XXXXXXXXXXSEKCEIMNLSGHVAPSEKHPGSLLEGFVQTQVSSLAVKNNLVVVGGFQGE 179
                      +K E++N+SGHVAP EKHPGSLLEGF QTQVS+LAV++ L++ GGFQGE
Sbjct: 154 -----------KKTEVLNVSGHVAPCEKHPGSLLEGFTQTQVSTLAVRDKLLIAGGFQGE 202

Query: 178 LICKALDRKGISFCCRMTYNDNSITNALEIYDSASGAPHFVASNNDCSVRDYDMEKFQL 2
           +ICK LDR G+SFC R TY+DN+ITNA+EIYD ASGA HF+ASNNDC VRD+DMEKFQL
Sbjct: 203 IICKHLDRSGVSFCYRTTYDDNAITNAVEIYDYASGAVHFMASNNDCGVRDFDMEKFQL 261


>ref|XP_002330572.1| predicted protein [Populus trichocarpa] gi|222872130|gb|EEF09261.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  266 bits (679), Expect = 2e-69
 Identities = 126/179 (70%), Positives = 151/179 (84%)
 Frame = -3

Query: 538 DCKPSKKGGLFYDFQRNTRSVKSTILHFQLRNLVWATTKHDVYLMSHFSVLHWSAITXXX 359
           DCK ++KGG++Y+F+RN+RSVKSTILHFQLRNLVWATTKHDVYLMSHFSV+HWS++T   
Sbjct: 103 DCKITEKGGMYYEFRRNSRSVKSTILHFQLRNLVWATTKHDVYLMSHFSVIHWSSLTC-- 160

Query: 358 XXXXXXXXXXSEKCEIMNLSGHVAPSEKHPGSLLEGFVQTQVSSLAVKNNLVVVGGFQGE 179
                       K +++++SGHVAP+EKHPGSLLEGF QTQVS+LAVK+NL+V GGFQGE
Sbjct: 161 -----------SKADVLDVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDNLLVAGGFQGE 209

Query: 178 LICKALDRKGISFCCRMTYNDNSITNALEIYDSASGAPHFVASNNDCSVRDYDMEKFQL 2
           LICK LDR G+SFC R TY+DN+ITNA+EIYDS SGA HF ASNND  VRD+DMEK+QL
Sbjct: 210 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYDSPSGAVHFTASNNDHGVRDFDMEKYQL 268


>ref|NP_001047961.1| Os02g0721600 [Oryza sativa Japonica Group]
           gi|45735977|dbj|BAD13006.1| putative WD-40 repeat
           protein [Oryza sativa Japonica Group]
           gi|113537492|dbj|BAF09875.1| Os02g0721600 [Oryza sativa
           Japonica Group] gi|215704357|dbj|BAG93791.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215767056|dbj|BAG99284.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 446

 Score =  264 bits (675), Expect = 6e-69
 Identities = 125/179 (69%), Positives = 151/179 (84%)
 Frame = -3

Query: 538 DCKPSKKGGLFYDFQRNTRSVKSTILHFQLRNLVWATTKHDVYLMSHFSVLHWSAITXXX 359
           +CKP++KGG++Y+F+RNTRSVKSTILHFQLRNLVWAT+KHDVYLMSHFSVLHWSA++   
Sbjct: 104 ECKPTEKGGMYYEFRRNTRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVLHWSALSGLD 163

Query: 358 XXXXXXXXXXSEKCEIMNLSGHVAPSEKHPGSLLEGFVQTQVSSLAVKNNLVVVGGFQGE 179
                         E+MN+ GHVAP EKHPGSLLEGF  TQVS+L+VK+NL+V GGFQGE
Sbjct: 164 T-------------ELMNVQGHVAPREKHPGSLLEGFSGTQVSTLSVKDNLLVAGGFQGE 210

Query: 178 LICKALDRKGISFCCRMTYNDNSITNALEIYDSASGAPHFVASNNDCSVRDYDMEKFQL 2
           LICK LDR+GISFCCR TY++N+ITNA+EI+++ SGA HF+ASNND  VRDYDME+FQL
Sbjct: 211 LICKHLDREGISFCCRTTYDENAITNAVEIFNTTSGAVHFMASNNDSGVRDYDMERFQL 269


>ref|XP_002264198.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03
           [Vitis vinifera] gi|296090035|emb|CBI39854.3| unnamed
           protein product [Vitis vinifera]
          Length = 442

 Score =  263 bits (672), Expect = 1e-68
 Identities = 125/179 (69%), Positives = 148/179 (82%)
 Frame = -3

Query: 538 DCKPSKKGGLFYDFQRNTRSVKSTILHFQLRNLVWATTKHDVYLMSHFSVLHWSAITXXX 359
           +CK +KKGGLFY+F+ N RSVKSTILHFQLRNLVWAT+KHDVYLMSHFSV+HWS++T   
Sbjct: 100 ECKVTKKGGLFYEFKHNARSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTC-- 157

Query: 358 XXXXXXXXXXSEKCEIMNLSGHVAPSEKHPGSLLEGFVQTQVSSLAVKNNLVVVGGFQGE 179
                         E++N+SGHVAP EKHPGSLLEGF QTQVS+LAVK+ L+V GGFQGE
Sbjct: 158 -----------NMSEVLNVSGHVAPCEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGE 206

Query: 178 LICKALDRKGISFCCRMTYNDNSITNALEIYDSASGAPHFVASNNDCSVRDYDMEKFQL 2
           LICK LDR G+SFC R+TY+DN+ITNA+EIY S+SGA HF+AS+NDC VRD+DME FQL
Sbjct: 207 LICKYLDRPGVSFCSRITYDDNAITNAIEIYASSSGAVHFIASSNDCGVRDFDMEDFQL 265


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