BLASTX nr result

ID: Dioscorea21_contig00011432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011432
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272637.1| PREDICTED: probable transcription factor KAN...    87   3e-15
ref|XP_002893713.1| hypothetical protein ARALYDRAFT_473414 [Arab...    85   1e-14
ref|NP_564392.1| protein kanadi2 / DNA binding / transcription f...    80   4e-13
ref|XP_002303435.1| predicted protein [Populus trichocarpa] gi|2...    80   4e-13
ref|XP_002326546.1| predicted protein [Populus trichocarpa] gi|2...    78   1e-12

>ref|XP_002272637.1| PREDICTED: probable transcription factor KAN2-like [Vitis vinifera]
          Length = 341

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 50/131 (38%), Positives = 65/131 (49%), Gaps = 20/131 (15%)
 Frame = -3

Query: 426 MELFPAQPDLSLQISPPNNKQTSNWVRREDENMELGFWNKALDSNT-------------- 289
           MELFPAQPDLSLQISPPN K TS+W RR+ +  +LGFW  ++DSN               
Sbjct: 1   MELFPAQPDLSLQISPPNTKPTSSWSRRDHQEADLGFWRSSMDSNKATPSSRKPDTASDL 60

Query: 288 -----NSINLSSDTTFXXXXXXXXXXXXXXXXXXNHSHQPSSFIHQDLSLMRPIRGIPLY 124
                 ++  SS+                      H HQ    +HQ +  +RPIRGIP+Y
Sbjct: 61  SLANPKALEPSSNHIHALHPKYHTLLAPPQLQQKYHHHQEG--LHQQIGFLRPIRGIPIY 118

Query: 123 HHSSTS-SFPY 94
             +  S SFP+
Sbjct: 119 QSTPPSFSFPH 129


>ref|XP_002893713.1| hypothetical protein ARALYDRAFT_473414 [Arabidopsis lyrata subsp.
           lyrata] gi|297339555|gb|EFH69972.1| hypothetical protein
           ARALYDRAFT_473414 [Arabidopsis lyrata subsp. lyrata]
          Length = 387

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 55/139 (39%), Positives = 68/139 (48%), Gaps = 36/139 (25%)
 Frame = -3

Query: 426 MELFPAQPDLSLQISPPNNKQTSNWVRR-------EDENMELGFWNKALDSNTNSI--NL 274
           MELFPAQPDLSLQISPPN+K TS W RR       + E ++LGFW +ALDS T+S+  N 
Sbjct: 1   MELFPAQPDLSLQISPPNSKPTSTWQRRRSTTDQEDHEELDLGFWRRALDSRTSSLVSNS 60

Query: 273 SSDTTFXXXXXXXXXXXXXXXXXXNHSHQP--------------------------SSFI 172
           SS T                    +H H P                            F+
Sbjct: 61  SSKTINHPFQDLSLSNNSHHQQQQHHHHHPQLLPNCNGSNILTSFQFPTQQQQQHLQGFL 120

Query: 171 HQDLSL-MRPIRGIPLYHH 118
            +DL+  +RPIRGIPLYH+
Sbjct: 121 ARDLNTHLRPIRGIPLYHN 139


>ref|NP_564392.1| protein kanadi2 / DNA binding / transcription factor [Arabidopsis
           thaliana] gi|75333399|sp|Q9C616.1|KAN2_ARATH RecName:
           Full=Probable transcription factor KAN2; AltName:
           Full=Protein KANADI 2
           gi|12597871|gb|AAG60180.1|AC084110_13 unknown protein
           [Arabidopsis thaliana] gi|15723595|gb|AAL05437.1|
           GARP-like putative transcription factor KANADI2
           [Arabidopsis thaliana] gi|115646867|gb|ABJ17146.1|
           At1g32240 [Arabidopsis thaliana]
           gi|225897994|dbj|BAH30329.1| hypothetical protein
           [Arabidopsis thaliana] gi|332193334|gb|AEE31455.1|
           protein kanadi2 / DNA binding / transcription factor
           [Arabidopsis thaliana]
          Length = 388

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 52/146 (35%), Positives = 67/146 (45%), Gaps = 35/146 (23%)
 Frame = -3

Query: 426 MELFPAQPDLSLQISPPNNKQTSNWVRR-------EDENMELGFWNKALDSNTNS-INLS 271
           MELFPAQPDLSLQISPPN+K +S W RR       + E ++LGFW +ALDS T+S ++ S
Sbjct: 1   MELFPAQPDLSLQISPPNSKPSSTWQRRRSTTDQEDHEELDLGFWRRALDSRTSSLVSNS 60

Query: 270 SDTTFXXXXXXXXXXXXXXXXXXNHSHQP--------------------------SSFIH 169
           +  T                      H P                            F+ 
Sbjct: 61  TSKTINHPFQDLSLSNISHHQQQQQHHHPQLLPNCNSSNILTSFQFPTQQQQQHLQGFLA 120

Query: 168 QDLSL-MRPIRGIPLYHHSSTSSFPY 94
            DL+  +RPIRGIPLYH+      P+
Sbjct: 121 HDLNTHLRPIRGIPLYHNPPPHHHPH 146


>ref|XP_002303435.1| predicted protein [Populus trichocarpa] gi|222840867|gb|EEE78414.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 56/151 (37%), Positives = 68/151 (45%), Gaps = 40/151 (26%)
 Frame = -3

Query: 426 MELFPAQPDLSLQISPPNNKQTSNWVRREDENMELGFWNKALDS-NTNSINLSSDTTF-- 256
           MELFPAQPDLSLQISPPN+K TS W RR +E M+LGFW +ALDS N+ S     DT F  
Sbjct: 1   MELFPAQPDLSLQISPPNSKPTSTW-RRTEEEMDLGFWTRALDSRNSISSMAKPDTCFEL 59

Query: 255 ------------------------------XXXXXXXXXXXXXXXXXXNHSHQPSSF--- 175
                                                            H+H P  F   
Sbjct: 60  SLSNPKVSEPNSNHFHNILQNSNNCNGNNLFHSFQQNQYTHHHHQQNHLHNHHPVLFQQQ 119

Query: 174 ----IHQDLSLMRPIRGIPLYHHSSTSSFPY 94
               + Q+L  +RPIRGIP+Y  +  S FP+
Sbjct: 120 QQQGLSQELGFLRPIRGIPVY-QNPPSPFPF 149


>ref|XP_002326546.1| predicted protein [Populus trichocarpa] gi|222833868|gb|EEE72345.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 53/146 (36%), Positives = 65/146 (44%), Gaps = 43/146 (29%)
 Frame = -3

Query: 426 MELFPAQPDLSLQISPPNNKQTSNWVRREDENMELGFWNKALDS---------------- 295
           MELFPAQPDLSLQISPPN+K TS W RR +E M+LGFW +ALDS                
Sbjct: 1   MELFPAQPDLSLQISPPNSKPTSTW-RRTEEEMDLGFWKRALDSRNSMSPMAKPDSCFEL 59

Query: 294 --------------------NTNSINLSSDTTFXXXXXXXXXXXXXXXXXXNHSHQPSSF 175
                               NTN+ N +S                       H+H P  F
Sbjct: 60  SLSNPRVSEPNSNHFHNSLQNTNNCNGNS---LFHSFQKNQYTHPHHKQNRLHNHHPVLF 116

Query: 174 -------IHQDLSLMRPIRGIPLYHH 118
                  + Q+L  +RPIRGIP+Y +
Sbjct: 117 QPQQQEGLSQELGFLRPIRGIPVYQN 142


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