BLASTX nr result

ID: Dioscorea21_contig00011420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011420
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001045260.1| Os01g0926200 [Oryza sativa Japonica Group] g...   276   7e-72
ref|XP_002456881.1| hypothetical protein SORBIDRAFT_03g044490 [S...   273   4e-71
ref|XP_003564979.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   270   4e-70
dbj|BAK05564.1| predicted protein [Hordeum vulgare subsp. vulgare]    270   4e-70
ref|NP_001149175.1| LOC100282797 [Zea mays] gi|194706242|gb|ACF8...   261   2e-67

>ref|NP_001045260.1| Os01g0926200 [Oryza sativa Japonica Group]
           gi|57900128|dbj|BAD88190.1| zinc finger (C3HC4-type RING
           finger) protein-like [Oryza sativa Japonica Group]
           gi|113534791|dbj|BAF07174.1| Os01g0926200 [Oryza sativa
           Japonica Group] gi|215707113|dbj|BAG93573.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218189648|gb|EEC72075.1| hypothetical protein
           OsI_05009 [Oryza sativa Indica Group]
           gi|222619796|gb|EEE55928.1| hypothetical protein
           OsJ_04613 [Oryza sativa Japonica Group]
          Length = 229

 Score =  276 bits (706), Expect = 7e-72
 Identities = 129/190 (67%), Positives = 151/190 (79%)
 Frame = -3

Query: 987 YSAMFQRLEGRTAPSPVQGVTPLAPTGLGTNAAENVLSETYHLVPRPVPYDADPRYSRSQ 808
           Y+A FQRLE R + +P QG  PLA T   TN  +N LSETYHLV RP PYD DPRY+R Q
Sbjct: 41  YTATFQRLESRPS-NPAQGAAPLASTNPSTNITDNSLSETYHLVSRPPPYDTDPRYARVQ 99

Query: 807 REGLVSRREKGMSLVQDDSQMLRRNGSSSGVEHLAAAKKRNSADSEDECKANRAEPDKSL 628
           REGLVSRREK ++L Q++S  LRRNGSSSG+EHLAA KK +S + E E K +R+E  KSL
Sbjct: 100 REGLVSRREKSINLTQEESLALRRNGSSSGIEHLAAQKKWSSTEPEGEYKVHRSESTKSL 159

Query: 627 SAKGFGTGYILATSEDEDVCPTCLEEYTPDNPKIVTKCSHHYHLGCIYEWMERSENCPIC 448
           SAK + + + + TSEDEDVCPTCLEEYTPDNPKI+ KCSHHYHL CIYEWMERS+ CPIC
Sbjct: 160 SAKSYNSSFAVVTSEDEDVCPTCLEEYTPDNPKIIAKCSHHYHLSCIYEWMERSDTCPIC 219

Query: 447 GKEMDFCESP 418
           GKEM+FCE+P
Sbjct: 220 GKEMEFCETP 229


>ref|XP_002456881.1| hypothetical protein SORBIDRAFT_03g044490 [Sorghum bicolor]
           gi|241928856|gb|EES02001.1| hypothetical protein
           SORBIDRAFT_03g044490 [Sorghum bicolor]
          Length = 229

 Score =  273 bits (699), Expect = 4e-71
 Identities = 128/190 (67%), Positives = 150/190 (78%)
 Frame = -3

Query: 987 YSAMFQRLEGRTAPSPVQGVTPLAPTGLGTNAAENVLSETYHLVPRPVPYDADPRYSRSQ 808
           Y+A FQRLE R   +P QGVTP   T    N  +N L+ETYHLV RP PYD DPRY+R Q
Sbjct: 41  YTATFQRLESRPN-NPAQGVTPPGSTNPSVNINDNSLAETYHLVSRPPPYDTDPRYARVQ 99

Query: 807 REGLVSRREKGMSLVQDDSQMLRRNGSSSGVEHLAAAKKRNSADSEDECKANRAEPDKSL 628
           REGLVSRREK ++L Q++S  LRRNGSSSG+EHLAA KKR+S ++E E   +R+E  KSL
Sbjct: 100 REGLVSRREKSINLAQEESLALRRNGSSSGIEHLAAQKKRSSTENEGEYMVHRSESTKSL 159

Query: 627 SAKGFGTGYILATSEDEDVCPTCLEEYTPDNPKIVTKCSHHYHLGCIYEWMERSENCPIC 448
           SAK + + Y +  SEDEDVCPTCLEEYTPDNPKI+TKC HH+HLGCIYEWMERS+ CPIC
Sbjct: 160 SAKAYSSSYAVVASEDEDVCPTCLEEYTPDNPKIITKCCHHFHLGCIYEWMERSDTCPIC 219

Query: 447 GKEMDFCESP 418
           GKEM+FCESP
Sbjct: 220 GKEMEFCESP 229


>ref|XP_003564979.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Brachypodium
           distachyon]
          Length = 229

 Score =  270 bits (691), Expect = 4e-70
 Identities = 126/190 (66%), Positives = 154/190 (81%)
 Frame = -3

Query: 987 YSAMFQRLEGRTAPSPVQGVTPLAPTGLGTNAAENVLSETYHLVPRPVPYDADPRYSRSQ 808
           ++A FQRL+ R + +P QG  PLA T   TN  ++ LSETYHLV RP PYD DPRY+R Q
Sbjct: 41  HTATFQRLDSRPS-NPAQGAPPLASTNPITNITDSSLSETYHLVSRPPPYDTDPRYARVQ 99

Query: 807 REGLVSRREKGMSLVQDDSQMLRRNGSSSGVEHLAAAKKRNSADSEDECKANRAEPDKSL 628
           REGLVSRREK ++L Q++S +LRRNGSSSGVEHLAA KK ++ + E E K  R+E  KSL
Sbjct: 100 REGLVSRREKSINLTQEESPVLRRNGSSSGVEHLAAQKKWSNTELEGEHKVRRSESTKSL 159

Query: 627 SAKGFGTGYILATSEDEDVCPTCLEEYTPDNPKIVTKCSHHYHLGCIYEWMERSENCPIC 448
           SAK + +GY +AT+EDEDVCPTCLE+YTP+NPKI+TKCSHH+HL CIYEWMERS+ CP+C
Sbjct: 160 SAKAYNSGYAVATTEDEDVCPTCLEDYTPENPKIITKCSHHFHLSCIYEWMERSDTCPMC 219

Query: 447 GKEMDFCESP 418
           GKEM+FCESP
Sbjct: 220 GKEMEFCESP 229


>dbj|BAK05564.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 189

 Score =  270 bits (691), Expect = 4e-70
 Identities = 127/190 (66%), Positives = 151/190 (79%)
 Frame = -3

Query: 987 YSAMFQRLEGRTAPSPVQGVTPLAPTGLGTNAAENVLSETYHLVPRPVPYDADPRYSRSQ 808
           Y+A FQRL+ R + +P QG  PL+ T   TN  E+ LSET+HLV RP+PYD DPRY+R Q
Sbjct: 1   YTAAFQRLDSRPS-NPAQGAAPLSSTNPSTNITESSLSETFHLVSRPLPYDIDPRYARVQ 59

Query: 807 REGLVSRREKGMSLVQDDSQMLRRNGSSSGVEHLAAAKKRNSADSEDECKANRAEPDKSL 628
           REGLVSRREK ++L Q++S  LRRNGSSSGVEHLAA KKR+S D E E K  R+E  KSL
Sbjct: 60  REGLVSRREKSINLTQEESPALRRNGSSSGVEHLAAQKKRSSTDPEGEHKVRRSESTKSL 119

Query: 627 SAKGFGTGYILATSEDEDVCPTCLEEYTPDNPKIVTKCSHHYHLGCIYEWMERSENCPIC 448
           S K + + Y + TS+DEDVCPTCLEEYT +NP+IVTKCSHH+HL CIYEWMERS+ CPIC
Sbjct: 120 SGKAYNSSYTVITSDDEDVCPTCLEEYTLENPQIVTKCSHHFHLSCIYEWMERSDTCPIC 179

Query: 447 GKEMDFCESP 418
           GKEM+FCESP
Sbjct: 180 GKEMEFCESP 189


>ref|NP_001149175.1| LOC100282797 [Zea mays] gi|194706242|gb|ACF87205.1| unknown [Zea
           mays] gi|195625262|gb|ACG34461.1| protein binding
           protein [Zea mays] gi|224029405|gb|ACN33778.1| unknown
           [Zea mays] gi|414878907|tpg|DAA56038.1| TPA: putative
           RING zinc finger domain superfamily protein isoform 1
           [Zea mays] gi|414878908|tpg|DAA56039.1| TPA: putative
           RING zinc finger domain superfamily protein isoform 2
           [Zea mays]
          Length = 225

 Score =  261 bits (667), Expect = 2e-67
 Identities = 124/190 (65%), Positives = 147/190 (77%)
 Frame = -3

Query: 987 YSAMFQRLEGRTAPSPVQGVTPLAPTGLGTNAAENVLSETYHLVPRPVPYDADPRYSRSQ 808
           Y+A FQRLE R   +P QGV PL      TN + N+   + +LV RP PYD DPRY+R Q
Sbjct: 41  YTATFQRLESRPN-NPAQGVAPLG----STNPSVNINDNSLNLVSRPPPYDTDPRYARVQ 95

Query: 807 REGLVSRREKGMSLVQDDSQMLRRNGSSSGVEHLAAAKKRNSADSEDECKANRAEPDKSL 628
           REGLVSRREK ++L Q++S  LRRN SSSG+EHLAA KKRNS ++E E K +R+E  KSL
Sbjct: 96  REGLVSRREKSINLAQEESLALRRNASSSGIEHLAAQKKRNSTENEGEYKVHRSESTKSL 155

Query: 627 SAKGFGTGYILATSEDEDVCPTCLEEYTPDNPKIVTKCSHHYHLGCIYEWMERSENCPIC 448
           SAK + + Y +  SEDEDVCPTCLEEYTPDNPKI+TKC HH+HLGCIYEWMERS+ CPIC
Sbjct: 156 SAKAYSSSYAVVASEDEDVCPTCLEEYTPDNPKIITKCCHHFHLGCIYEWMERSDTCPIC 215

Query: 447 GKEMDFCESP 418
           GKEM+FCESP
Sbjct: 216 GKEMEFCESP 225


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