BLASTX nr result

ID: Dioscorea21_contig00011419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011419
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   119   3e-25
ref|XP_002514123.1| DNA repair protein reca, putative [Ricinus c...   106   2e-21
dbj|BAJ97339.1| predicted protein [Hordeum vulgare subsp. vulgare]    100   2e-19
gb|EEC71973.1| hypothetical protein OsI_04810 [Oryza sativa Indi...    97   1e-18
ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group] g...    97   1e-18

>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
           [Vitis vinifera] gi|297738654|emb|CBI27899.3| unnamed
           protein product [Vitis vinifera]
          Length = 421

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/74 (72%), Positives = 64/74 (86%)
 Frame = +3

Query: 3   FKTAQFELEFGKGICRDSEIIELGCKHKLITKGGGGYYSLNGQNLRGKDAVKRYFTENED 182
           FKTAQFELEFGKGICR+SEI+ELGCKHK I KGGG  YS NGQ+ RGKDA+K++ ++NE 
Sbjct: 311 FKTAQFELEFGKGICRESEIVELGCKHKFIIKGGGAMYSYNGQSFRGKDAIKQFLSQNES 370

Query: 183 AREELIMKLREKLM 224
            REEL+ KLREKL+
Sbjct: 371 EREELMRKLREKLV 384


>ref|XP_002514123.1| DNA repair protein reca, putative [Ricinus communis]
           gi|223546579|gb|EEF48077.1| DNA repair protein reca,
           putative [Ricinus communis]
          Length = 380

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/75 (65%), Positives = 62/75 (82%)
 Frame = +3

Query: 3   FKTAQFELEFGKGICRDSEIIELGCKHKLITKGGGGYYSLNGQNLRGKDAVKRYFTENED 182
           FKT QFELEFGKGICRDSEI+ELG KHK + K  G +Y+ NGQN  GK+A +++  EN++
Sbjct: 271 FKTVQFELEFGKGICRDSEIMELGVKHKFLGK-AGSFYNYNGQNFHGKEAFRKFLAENDN 329

Query: 183 AREELIMKLREKLMH 227
           AREEL+MKLREKL++
Sbjct: 330 AREELVMKLREKLLN 344


>dbj|BAJ97339.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 429

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/70 (67%), Positives = 54/70 (77%)
 Frame = +3

Query: 3   FKTAQFELEFGKGICRDSEIIELGCKHKLITKGGGGYYSLNGQNLRGKDAVKRYFTENED 182
           F+TAQFELEFGKGICR SE+ ELG KHKL+ K GG YYS N Q   GKDAVK + T+NE 
Sbjct: 318 FRTAQFELEFGKGICRSSELFELGLKHKLVKKTGGAYYSFNEQQFHGKDAVKSFLTKNEG 377

Query: 183 AREELIMKLR 212
           A +EL M+LR
Sbjct: 378 AAKELEMELR 387


>gb|EEC71973.1| hypothetical protein OsI_04810 [Oryza sativa Indica Group]
          Length = 339

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/74 (66%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   FKTAQFELEFGKGICRDSEIIELGCKHKLITKGGGGYYSLNGQNLRGKDAVKRYFTENED 182
           FKTAQFELEFGKGICR SE+IELG KHKL+ K GG +YS N ++ RGKDA+K Y  ENE 
Sbjct: 228 FKTAQFELEFGKGICRSSELIELGLKHKLVKKLGGAFYSFNEESYRGKDALKSYLNENES 287

Query: 183 AREELIMKLREKLM 224
             +EL   LR KLM
Sbjct: 288 IAKELETNLR-KLM 300


>ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group]
           gi|56784510|dbj|BAD82767.1| putative recA protein [Oryza
           sativa Japonica Group] gi|56784869|dbj|BAD82109.1|
           putative recA protein [Oryza sativa Japonica Group]
           gi|113534640|dbj|BAF07023.1| Os01g0901200 [Oryza sativa
           Japonica Group] gi|222619696|gb|EEE55828.1| hypothetical
           protein OsJ_04434 [Oryza sativa Japonica Group]
          Length = 429

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/74 (66%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   FKTAQFELEFGKGICRDSEIIELGCKHKLITKGGGGYYSLNGQNLRGKDAVKRYFTENED 182
           FKTAQFELEFGKGICR SE+IELG KHKL+ K GG +YS N ++ RGKDA+K Y  ENE 
Sbjct: 318 FKTAQFELEFGKGICRSSELIELGLKHKLVKKLGGAFYSFNEESYRGKDALKSYLNENES 377

Query: 183 AREELIMKLREKLM 224
             +EL   LR KLM
Sbjct: 378 IAKELETNLR-KLM 390


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