BLASTX nr result

ID: Dioscorea21_contig00011415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011415
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea ma...    76   3e-12
ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group] g...    75   7e-12
gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indi...    75   7e-12
dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   2e-11
ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    72   6e-11

>ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
           gi|194702086|gb|ACF85127.1| unknown [Zea mays]
           gi|413922319|gb|AFW62251.1| putative regulator of
           chromosome condensation (RCC1) family protein isoform 1
           [Zea mays] gi|413922320|gb|AFW62252.1| putative
           regulator of chromosome condensation (RCC1) family
           protein isoform 2 [Zea mays]
          Length = 389

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = +3

Query: 3   KVTTGHPMEVPINLPAPKNGTAGGRWRAKFVACGGRHTLAVAEW 134
           KVTTGHPME+PINLP P + +  GRW+AK+VACGGRHTLA+AEW
Sbjct: 342 KVTTGHPMELPINLP-PLSSSRDGRWQAKYVACGGRHTLAIAEW 384


>ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
           gi|38175475|dbj|BAD01172.1| putative UVB-resistance
           protein UVR8 [Oryza sativa Japonica Group]
           gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa
           Japonica Group] gi|215734996|dbj|BAG95718.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222640598|gb|EEE68730.1| hypothetical protein
           OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/46 (69%), Positives = 39/46 (84%), Gaps = 2/46 (4%)
 Frame = +3

Query: 3   KVTTGHPMEVPINLPAP--KNGTAGGRWRAKFVACGGRHTLAVAEW 134
           KVTTGHPMEVPI+LP P    G +GG+W+A++VACGGRHTLA+A W
Sbjct: 345 KVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIATW 390


>gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/46 (69%), Positives = 39/46 (84%), Gaps = 2/46 (4%)
 Frame = +3

Query: 3   KVTTGHPMEVPINLPAP--KNGTAGGRWRAKFVACGGRHTLAVAEW 134
           KVTTGHPMEVPI+LP P    G +GG+W+A++VACGGRHTLA+A W
Sbjct: 345 KVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIATW 390


>dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/47 (68%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   KVTTGHPMEVPINLPAPKNGTAG-GRWRAKFVACGGRHTLAVAEWVN 140
           KVTTGHPMEVPINLP PK  T+  G W+A +VACGGRHTLA+  W +
Sbjct: 342 KVTTGHPMEVPINLPPPKTSTSSEGLWQANYVACGGRHTLAIVTWTD 388


>ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
           gi|296087299|emb|CBI33673.3| unnamed protein product
           [Vitis vinifera]
          Length = 395

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/48 (68%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
 Frame = +3

Query: 3   KVTTGHPMEVPINLPAPKN---GTAGGRWRAKFVACGGRHTLAVAEWV 137
           KVTTGHPMEVPINLP   N     AGG W +K VACGGRHTLA+ EW+
Sbjct: 340 KVTTGHPMEVPINLPPATNLSGSGAGGHWCSKLVACGGRHTLAIVEWL 387


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