BLASTX nr result

ID: Dioscorea21_contig00011395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011395
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565120.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   405   e-111
ref|NP_001183253.1| uncharacterized protein LOC100501644 [Zea ma...   399   e-109
ref|XP_004166406.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   398   e-109
dbj|BAJ98751.1| predicted protein [Hordeum vulgare subsp. vulgare]    396   e-108
gb|EEE56046.1| hypothetical protein OsJ_04843 [Oryza sativa Japo...   392   e-107

>ref|XP_003565120.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Brachypodium
           distachyon]
          Length = 388

 Score =  405 bits (1040), Expect = e-111
 Identities = 198/282 (70%), Positives = 223/282 (79%), Gaps = 2/282 (0%)
 Frame = -1

Query: 897 FDEDNLIPCFGFGDASTRDQYVFSFYPDQRACRGFEEALSRYRVIAPLLNLSGPTSFAPL 718
           FD+DNLIPCFGFGDAST D  VFSF+ D R CRGFEE L RYR I P LNLSGPTSFAPL
Sbjct: 107 FDDDNLIPCFGFGDASTHDHSVFSFFKDNRPCRGFEEVLERYRQIVPHLNLSGPTSFAPL 166

Query: 717 IHASIDIVERSNWQYHVLVIIADGQVTRNPDVPRGALSPQERATVNAIVYASHYPLSIIM 538
           IHA++ +VE SNWQYHVLVIIADGQVT N +   G LSPQE AT+ AIV AS YPLSI+M
Sbjct: 167 IHAAMSVVENSNWQYHVLVIIADGQVT-NTNSGDGRLSPQEHATIQAIVDASFYPLSIVM 225

Query: 537 VGVGDGPWDAMQQFDDCIPERTFDNFQFVNFTKIMSANTEMRKKEAAFALAALMEVPFQY 358
           VGVGDGPWDAMQ FDDCIP+R FDNFQFVNFT IMS + +M KKEAAFALAALME+P QY
Sbjct: 226 VGVGDGPWDAMQHFDDCIPDRAFDNFQFVNFTDIMSTSKDMSKKEAAFALAALMEMPTQY 285

Query: 357 RATQGLKHLEKHMEKNYTSNVLPPPANVTEHDNNVATAFSQTSSKSVSED--ASTEQVCA 184
           +ATQG++  EKH +      +LPPP  V EHDN  A+     +S+S   D  AS EQVC 
Sbjct: 286 KATQGIRPPEKHTQMTDRPMILPPPNKVLEHDNAAASHPPTATSRSAGADKNASDEQVCP 345

Query: 183 ICLSNPKDMAFGCGHQTCKECGATLSTCPICRAPITIKIRLY 58
           ICL+NPKDMAF CGH TCKECG TLSTCP+CRAPIT+++RLY
Sbjct: 346 ICLTNPKDMAFQCGHLTCKECGPTLSTCPMCRAPITVRVRLY 387


>ref|NP_001183253.1| uncharacterized protein LOC100501644 [Zea mays]
           gi|238007882|gb|ACR34976.1| unknown [Zea mays]
           gi|238010338|gb|ACR36204.1| unknown [Zea mays]
           gi|413951245|gb|AFW83894.1| hypothetical protein
           ZEAMMB73_890555 [Zea mays]
          Length = 389

 Score =  399 bits (1025), Expect = e-109
 Identities = 195/285 (68%), Positives = 226/285 (79%), Gaps = 5/285 (1%)
 Frame = -1

Query: 897 FDEDNLIPCFGFGDASTRDQYVFSFYPDQRACRGFEEALSRYRVIAPLLNLSGPTSFAPL 718
           FD+DNLIPCFGFGDAST D  VFSFYP+ R CRGFEE L RYR I P LNLSGPTSFAPL
Sbjct: 105 FDDDNLIPCFGFGDASTHDHSVFSFYPENRPCRGFEEVLVRYRQIVPHLNLSGPTSFAPL 164

Query: 717 IHASIDIVERSNWQYHVLVIIADGQVTRNPDVPRGALSPQERATVNAIVYASHYPLSIIM 538
           I+A+I +VE SNWQYHVLVIIADGQVT   ++  G LSPQE+AT+ AIV AS+YPLSI+M
Sbjct: 165 IYAAISVVENSNWQYHVLVIIADGQVTA-ANINDGRLSPQEQATIQAIVDASYYPLSIVM 223

Query: 537 VGVGDGPWDAMQQFDDCIPERTFDNFQFVNFTKIMSANTEMRKKEAAFALAALMEVPFQY 358
           VGVGDGPWDAMQ FDDCIPER FDNFQFVNFT IMS + +M KKEAAFALAALME+P QY
Sbjct: 224 VGVGDGPWDAMQHFDDCIPERAFDNFQFVNFTGIMSTSKDMSKKEAAFALAALMEIPSQY 283

Query: 357 RATQGLKHLEKHMEKNYTSNVLPPPANVTEHDNNVATA-----FSQTSSKSVSEDASTEQ 193
           +ATQGL+  EK  ++  +  +LPPP  V E+DN  A A      + + S  + + A+ EQ
Sbjct: 284 KATQGLRPPEKQAQRIGSPRILPPPNKVLENDNAAAAASHPPQTASSKSTGIGKSAADEQ 343

Query: 192 VCAICLSNPKDMAFGCGHQTCKECGATLSTCPICRAPITIKIRLY 58
           VC ICL+NPKDMAF CGH TCKECG TLSTCP+CRA IT+++RLY
Sbjct: 344 VCPICLTNPKDMAFQCGHLTCKECGPTLSTCPLCRALITMRVRLY 388


>ref|XP_004166406.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Cucumis sativus]
          Length = 364

 Score =  398 bits (1023), Expect = e-109
 Identities = 189/280 (67%), Positives = 226/280 (80%)
 Frame = -1

Query: 897 FDEDNLIPCFGFGDASTRDQYVFSFYPDQRACRGFEEALSRYRVIAPLLNLSGPTSFAPL 718
           FD+D LIPCFGFGDAST DQ+VFSFYPD R C+GF+EAL RYR I P LNLSGPTSFAP+
Sbjct: 85  FDDDGLIPCFGFGDASTCDQHVFSFYPDHRPCKGFKEALFRYREILPYLNLSGPTSFAPV 144

Query: 717 IHASIDIVERSNWQYHVLVIIADGQVTRNPDVPRGALSPQERATVNAIVYASHYPLSIIM 538
           I A+I IVE+SNWQYHVLVIIADGQVTRNP+ P G LS QE+AT+N+IV ASHYPLSII+
Sbjct: 145 IDAAIGIVEKSNWQYHVLVIIADGQVTRNPNTPPGKLSFQEQATINSIVAASHYPLSIIL 204

Query: 537 VGVGDGPWDAMQQFDDCIPERTFDNFQFVNFTKIMSANTEMRKKEAAFALAALMEVPFQY 358
           +GVGDGPWDAM +FDD +P+R FDNFQFVNFTKIMS +TE  KKEAAFALAALME+PFQY
Sbjct: 205 IGVGDGPWDAMHKFDDNLPQRAFDNFQFVNFTKIMSESTEASKKEAAFALAALMEIPFQY 264

Query: 357 RATQGLKHLEKHMEKNYTSNVLPPPANVTEHDNNVATAFSQTSSKSVSEDASTEQVCAIC 178
           RAT  L + ++      ++  LPPP  V  +DN VA    + ++K+    +S+E VC IC
Sbjct: 265 RATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILE-NAKAEKHSSSSESVCPIC 323

Query: 177 LSNPKDMAFGCGHQTCKECGATLSTCPICRAPITIKIRLY 58
           L+NPKDMAF CGH TCK+CG T+STCP+CR PI +++RLY
Sbjct: 324 LTNPKDMAFACGHTTCKDCGVTISTCPLCREPIKMRLRLY 363


>dbj|BAJ98751.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 382

 Score =  396 bits (1017), Expect = e-108
 Identities = 195/283 (68%), Positives = 224/283 (79%), Gaps = 3/283 (1%)
 Frame = -1

Query: 897 FDEDNLIPCFGFGDASTRDQYVFSFYPDQRACRGFEEALSRYRVIAPLLNLSGPTSFAPL 718
           FD+DNLIPCFGFGDAST D  VFSFY + R CRGFEE L RYR I P LNLSGPTSFAPL
Sbjct: 101 FDDDNLIPCFGFGDASTHDHSVFSFYQENRPCRGFEEVLDRYRQIVPHLNLSGPTSFAPL 160

Query: 717 IHASIDIVERSNWQYHVLVIIADGQVTRNPDVPRGALSPQERATVNAIVYASHYPLSIIM 538
           I+A++ +VE SN QYHVLVIIADGQVT +     G LSPQE+AT+ AIV AS YPLSI+M
Sbjct: 161 IYAAMSVVESSNCQYHVLVIIADGQVTTSNS--GGRLSPQEQATIQAIVDASFYPLSIVM 218

Query: 537 VGVGDGPWDAMQQFDDCIPERTFDNFQFVNFTKIMSANTEMRKKEAAFALAALMEVPFQY 358
           VGVGDGPWDAMQ FDDCIP+R FDNFQFVNFT IMSA+ +M KKEAAFALAALME+P QY
Sbjct: 219 VGVGDGPWDAMQHFDDCIPDRAFDNFQFVNFTGIMSASKDMSKKEAAFALAALMEIPTQY 278

Query: 357 RATQGLKHLEKHMEKNYTSNVLPPPANVTEHDNNVATA---FSQTSSKSVSEDASTEQVC 187
           +ATQGL+  E+H +      +LPPP  V EHDN VA +    + + S  V + AS EQVC
Sbjct: 279 KATQGLRPPERHAQNPNPLRILPPPNKVLEHDNIVAASRAPAATSRSTDVGKTASDEQVC 338

Query: 186 AICLSNPKDMAFGCGHQTCKECGATLSTCPICRAPITIKIRLY 58
            ICL+NPKDMAF CGH TCKECG TLSTCP+CRAPIT+++RL+
Sbjct: 339 PICLTNPKDMAFQCGHLTCKECGPTLSTCPLCRAPITVRVRLF 381


>gb|EEE56046.1| hypothetical protein OsJ_04843 [Oryza sativa Japonica Group]
          Length = 626

 Score =  392 bits (1008), Expect = e-107
 Identities = 195/283 (68%), Positives = 226/283 (79%), Gaps = 3/283 (1%)
 Frame = -1

Query: 897  FDEDNLIPCFGFGDASTRDQYVFSFYPDQRACRGFEEALSRYRVIAPLLNLSGPTSFAPL 718
            FD+DNLIPCFGFGDAST DQ VFSFY D R+C GFEE L RYR I P LNLSGPTSFAPL
Sbjct: 344  FDDDNLIPCFGFGDASTHDQSVFSFYQDSRSCCGFEEVLERYRQIVPHLNLSGPTSFAPL 403

Query: 717  IHASIDIVERSNWQYHVLVIIADGQVTRNPDVPRGALSPQERATVNAIVYASHYPLSIIM 538
            I+A+I +VE SN QYHVLVIIADGQVT + +   G LSPQE+AT+ AIV AS+YPLSI+M
Sbjct: 404  IYAAISVVENSNLQYHVLVIIADGQVTTS-NTKDGKLSPQEQATIQAIVDASYYPLSIVM 462

Query: 537  VGVGDGPWDAMQQFDDCIPERTFDNFQFVNFTKIMSANTEMRKKEAAFALAALMEVPFQY 358
            VGVGDGPWDAMQ FDDCIP+R FDNFQFVNFT+IMS + +M KKEAAFALAALME+P QY
Sbjct: 463  VGVGDGPWDAMQHFDDCIPDRAFDNFQFVNFTEIMSTSKDMPKKEAAFALAALMEIPSQY 522

Query: 357  RATQGLKHLEKHMEKNYTS-NVLPPPANVTEHDNNVATAFSQTSSKSV--SEDASTEQVC 187
            +ATQGL+ LEKH     +   +LPPP  V E+DN  A+     SS+S    ++ + EQVC
Sbjct: 523  KATQGLRPLEKHAGHVASHLRILPPPNKVLENDNAAASRPPTASSQSTGFGKNTTDEQVC 582

Query: 186  AICLSNPKDMAFGCGHQTCKECGATLSTCPICRAPITIKIRLY 58
             ICL+NPKDMAF CGH TCKECG TLSTCP+CR PIT+++RLY
Sbjct: 583  PICLTNPKDMAFQCGHLTCKECGPTLSTCPLCRVPITMRVRLY 625


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