BLASTX nr result

ID: Dioscorea21_contig00011392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011392
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066573.1| Os12g0279600 [Oryza sativa Japonica Group] g...   556   e-156
ref|XP_003578718.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   552   e-155
ref|XP_002443817.1| hypothetical protein SORBIDRAFT_07g002730 [S...   551   e-154
ref|XP_002277389.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   547   e-153
ref|NP_001144669.1| uncharacterized protein LOC100277695 [Zea ma...   545   e-153

>ref|NP_001066573.1| Os12g0279600 [Oryza sativa Japonica Group] gi|77554323|gb|ABA97119.1|
            exodeoxyribonuclease III family protein, expressed [Oryza
            sativa Japonica Group] gi|113649080|dbj|BAF29592.1|
            Os12g0279600 [Oryza sativa Japonica Group]
            gi|215687325|dbj|BAG91875.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222616909|gb|EEE53041.1|
            hypothetical protein OsJ_35763 [Oryza sativa Japonica
            Group]
          Length = 379

 Score =  556 bits (1432), Expect = e-156
 Identities = 250/315 (79%), Positives = 294/315 (93%)
 Frame = -3

Query: 1017 SPAKAEPLKFLTWNANSLLLRVKSNWAEFSKFIQTLDPDVIAIQEVRMPAAGSKGAPKNP 838
            +P + EP +F+TWNANSLLLR+KS+W  F +F+  +DPDVI +QEVRMPAAGSKGAPKNP
Sbjct: 53   APREEEPRRFVTWNANSLLLRMKSDWPAFCQFVSRVDPDVICVQEVRMPAAGSKGAPKNP 112

Query: 837  SELKDDTSASREEKKMLLKALSAPPFGNYRVWWSLSDSKYGGTALFVKKEFQPKKVSFSL 658
             +LKDDTS+SR+EK+++L+ALS+PPF +YRVWWSLSDSKY GTA+ +KK+F+PKKVSF+L
Sbjct: 113  GQLKDDTSSSRDEKQVVLRALSSPPFKDYRVWWSLSDSKYAGTAMIIKKKFEPKKVSFNL 172

Query: 657  DRTGSKHEPDGRVILAEFETFLLLNTYVPNNGWKEEENSFQRRRKWDKRILDFVLNMDKP 478
            DRT SKHEPDGRVI+AEFE+FLLLNTY PNNGWKEEENSFQRRRKWDKR+L+FV  +DKP
Sbjct: 173  DRTSSKHEPDGRVIIAEFESFLLLNTYAPNNGWKEEENSFQRRRKWDKRMLEFVQQVDKP 232

Query: 477  LIWCGDLNVSHQEIDVSHPDFFSNAKLNGYVPPNNEDCGQPGFTLAERRRFSNILSMGKL 298
            LIWCGDLNVSH+EIDVSHPDFFS+AKLNGY+PPN EDCGQPGFTL+ERRRF NILS GKL
Sbjct: 233  LIWCGDLNVSHEEIDVSHPDFFSSAKLNGYIPPNKEDCGQPGFTLSERRRFGNILSQGKL 292

Query: 297  VDAYRFLHKEQDMECGFSWSGNPIGKYRGKRMRIDYFVVSEQLKGRVLACDIHGRGIELE 118
            VDAYR+LHKE+DM+CGFSWSG+PIGKYRGKRMRIDYF+VSE+LK ++++CDIHGRGIELE
Sbjct: 293  VDAYRYLHKEKDMDCGFSWSGHPIGKYRGKRMRIDYFLVSEKLKDQIVSCDIHGRGIELE 352

Query: 117  GFYGSDHCPVTLELS 73
            GFYGSDHCPV+LELS
Sbjct: 353  GFYGSDHCPVSLELS 367


>ref|XP_003578718.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like
            [Brachypodium distachyon]
          Length = 369

 Score =  552 bits (1423), Expect = e-155
 Identities = 256/331 (77%), Positives = 294/331 (88%)
 Frame = -3

Query: 1047 APADGVNAEASPAKAEPLKFLTWNANSLLLRVKSNWAEFSKFIQTLDPDVIAIQEVRMPA 868
            A A G   E +P + EP +F+TWNANSLLLR+KS+W  F +F+  LDPDVI +QEVRMPA
Sbjct: 33   ATAAGAGGEGAPGQ-EPRRFMTWNANSLLLRMKSDWPAFCQFVSRLDPDVICVQEVRMPA 91

Query: 867  AGSKGAPKNPSELKDDTSASREEKKMLLKALSAPPFGNYRVWWSLSDSKYGGTALFVKKE 688
            AGSKGAPKNPSELKDDTS+SREEK+++L+ALS+ PF +YRVWWSLSDSKY GTA+FVKK 
Sbjct: 92   AGSKGAPKNPSELKDDTSSSREEKQIVLRALSSSPFKDYRVWWSLSDSKYAGTAVFVKKM 151

Query: 687  FQPKKVSFSLDRTGSKHEPDGRVILAEFETFLLLNTYVPNNGWKEEENSFQRRRKWDKRI 508
            F+PKKVSF+LDRT SKHE DGRVI+ EFE+ LLLNTY PNNGWKEEENSFQRRRKWDKR+
Sbjct: 152  FEPKKVSFNLDRTSSKHESDGRVIIVEFESLLLLNTYAPNNGWKEEENSFQRRRKWDKRM 211

Query: 507  LDFVLNMDKPLIWCGDLNVSHQEIDVSHPDFFSNAKLNGYVPPNNEDCGQPGFTLAERRR 328
             +FV  +DKP IWCGDLNVSH+EIDVSHPDFFS+AKLNGY+PPN EDCGQPGFTLAER+R
Sbjct: 212  FEFVQQVDKPFIWCGDLNVSHEEIDVSHPDFFSSAKLNGYIPPNKEDCGQPGFTLAERQR 271

Query: 327  FSNILSMGKLVDAYRFLHKEQDMECGFSWSGNPIGKYRGKRMRIDYFVVSEQLKGRVLAC 148
            F NILS GKLVDAYR LHKE+DMECGFSWSGNPIGKYRGKRMRIDYF+VSE+LK R+++C
Sbjct: 272  FGNILSQGKLVDAYRHLHKEKDMECGFSWSGNPIGKYRGKRMRIDYFIVSERLKDRLVSC 331

Query: 147  DIHGRGIELEGFYGSDHCPVTLELSSVTSES 55
            +IHG GIELEGFYGSDHCPV+LELS   +E+
Sbjct: 332  EIHGHGIELEGFYGSDHCPVSLELSKDAAEA 362


>ref|XP_002443817.1| hypothetical protein SORBIDRAFT_07g002730 [Sorghum bicolor]
            gi|241940167|gb|EES13312.1| hypothetical protein
            SORBIDRAFT_07g002730 [Sorghum bicolor]
          Length = 369

 Score =  551 bits (1420), Expect = e-154
 Identities = 257/329 (78%), Positives = 296/329 (89%)
 Frame = -3

Query: 1041 ADGVNAEASPAKAEPLKFLTWNANSLLLRVKSNWAEFSKFIQTLDPDVIAIQEVRMPAAG 862
            A G + E  PA+ EP KFLTWNANSLLLR+KS+W  FS+ +  LDPDVI +QEVRMPAAG
Sbjct: 35   ATGGDGEGRPAE-EPRKFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQEVRMPAAG 93

Query: 861  SKGAPKNPSELKDDTSASREEKKMLLKALSAPPFGNYRVWWSLSDSKYGGTALFVKKEFQ 682
            SKGAPKNPSELKDDTS+SR+EK+++L+ALS  PF +YRVWWSLSDSKY GTA+F+KK+F+
Sbjct: 94   SKGAPKNPSELKDDTSSSRDEKQVVLRALSTSPFKDYRVWWSLSDSKYAGTAMFIKKKFE 153

Query: 681  PKKVSFSLDRTGSKHEPDGRVILAEFETFLLLNTYVPNNGWKEEENSFQRRRKWDKRILD 502
            PKKVSF+LDRT SKHE DGRVI+AEFE+FLLLNTY PNNGWKEEENSFQRRRKWDKR+L+
Sbjct: 154  PKKVSFNLDRTSSKHETDGRVIIAEFESFLLLNTYAPNNGWKEEENSFQRRRKWDKRMLE 213

Query: 501  FVLNMDKPLIWCGDLNVSHQEIDVSHPDFFSNAKLNGYVPPNNEDCGQPGFTLAERRRFS 322
            FV ++DKPLIWCGDLNVSH+EIDVSHPDFFS+AKLNGY PPN EDCGQPGFT AERRRF 
Sbjct: 214  FVQHVDKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYTPPNQEDCGQPGFTPAERRRFG 273

Query: 321  NILSMGKLVDAYRFLHKEQDMECGFSWSGNPIGKYRGKRMRIDYFVVSEQLKGRVLACDI 142
            NIL  GKLVDAYR LHKE+DM+ GFSWSG+PIGKYRGKRMRIDYF+VSEQLK R+++C++
Sbjct: 274  NILFQGKLVDAYRHLHKEKDMDGGFSWSGHPIGKYRGKRMRIDYFLVSEQLKDRIVSCEM 333

Query: 141  HGRGIELEGFYGSDHCPVTLELSSVTSES 55
            HGRGIEL+GFYGSDHCPVTLELS   +E+
Sbjct: 334  HGRGIELDGFYGSDHCPVTLELSKAVAEA 362


>ref|XP_002277389.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Vitis vinifera]
            gi|297733638|emb|CBI14885.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  547 bits (1409), Expect = e-153
 Identities = 258/319 (80%), Positives = 287/319 (89%), Gaps = 1/319 (0%)
 Frame = -3

Query: 1008 KAEPLKFLTWNANSLLLRVKSNWAEFSKFIQTLDPDVIAIQEVRMPAAGSKGAPKNPSEL 829
            K EPLKFLTWNANS L+RVK+NW EF+KF+  LDPDVIA+QEVRMPAAGSKGAPKN  EL
Sbjct: 36   KKEPLKFLTWNANSFLIRVKNNWPEFTKFVSDLDPDVIAVQEVRMPAAGSKGAPKNHGEL 95

Query: 828  KDDTSASREEKKMLLKALSAPPFGNYRVWWSLSDSKYGGTALFVKKEFQPKKVSFSLDRT 649
            KDDTS+SREEKK+L+ ALS PPFGNYRVWWSL+DSKY GTALFVKK FQPKKVSFS+D+ 
Sbjct: 96   KDDTSSSREEKKILMHALSRPPFGNYRVWWSLADSKYAGTALFVKKCFQPKKVSFSIDQK 155

Query: 648  GSKHEPDGRVILAEFETFLLLNTYVPNNGWKEEENSFQRRRKWDKRILDFVL-NMDKPLI 472
             SKHEP+GRVILAEFE+F LLNTYVPNNGWK+EE SFQRRRKWDKR+L+FV+ + DKPLI
Sbjct: 156  ASKHEPEGRVILAEFESFRLLNTYVPNNGWKDEETSFQRRRKWDKRMLEFVVQSSDKPLI 215

Query: 471  WCGDLNVSHQEIDVSHPDFFSNAKLNGYVPPNNEDCGQPGFTLAERRRFSNILSMGKLVD 292
            WCGDLNVSH+EIDVSHP+FFS AK NGYVPPN EDCGQPGFTLAERRRF  IL  GKLVD
Sbjct: 216  WCGDLNVSHEEIDVSHPEFFSAAKHNGYVPPNKEDCGQPGFTLAERRRFGGILKEGKLVD 275

Query: 291  AYRFLHKEQDMECGFSWSGNPIGKYRGKRMRIDYFVVSEQLKGRVLACDIHGRGIELEGF 112
            AYR LHKE+DME GFSWSGNPIGKYRGKRMRIDYF+V E LK R++AC+IHG+GIEL+GF
Sbjct: 276  AYRLLHKEKDMEGGFSWSGNPIGKYRGKRMRIDYFIVPEALKDRIVACEIHGQGIELKGF 335

Query: 111  YGSDHCPVTLELSSVTSES 55
            YGSDHCPV+LELS  +S S
Sbjct: 336  YGSDHCPVSLELSETSSGS 354


>ref|NP_001144669.1| uncharacterized protein LOC100277695 [Zea mays]
            gi|195645474|gb|ACG42205.1| hypothetical protein [Zea
            mays] gi|238007716|gb|ACR34893.1| unknown [Zea mays]
            gi|413917521|gb|AFW57453.1| hypothetical protein
            ZEAMMB73_666233 [Zea mays]
          Length = 373

 Score =  545 bits (1404), Expect = e-153
 Identities = 254/330 (76%), Positives = 294/330 (89%)
 Frame = -3

Query: 1047 APADGVNAEASPAKAEPLKFLTWNANSLLLRVKSNWAEFSKFIQTLDPDVIAIQEVRMPA 868
            A   G + E  P + EP KFLTWNANSLLLR+KS+W  FS+ +  LDPDVI +QEVRMPA
Sbjct: 35   ATGAGGDVEGRPTE-EPFKFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQEVRMPA 93

Query: 867  AGSKGAPKNPSELKDDTSASREEKKMLLKALSAPPFGNYRVWWSLSDSKYGGTALFVKKE 688
            AGSKGAPKNPSELKDDTS SR+EK+++L+ALSA PF +YRVWWSLSDSKY GTA+F+KK+
Sbjct: 94   AGSKGAPKNPSELKDDTSLSRDEKQVVLRALSASPFKDYRVWWSLSDSKYAGTAMFIKKK 153

Query: 687  FQPKKVSFSLDRTGSKHEPDGRVILAEFETFLLLNTYVPNNGWKEEENSFQRRRKWDKRI 508
            F+PKKVSF+LDRT SKHE DGRVI+AEFE+FLLLNTY PNNGWKEEEN+FQRRRKWDKR+
Sbjct: 154  FEPKKVSFNLDRTSSKHEADGRVIIAEFESFLLLNTYSPNNGWKEEENAFQRRRKWDKRM 213

Query: 507  LDFVLNMDKPLIWCGDLNVSHQEIDVSHPDFFSNAKLNGYVPPNNEDCGQPGFTLAERRR 328
            L+FV ++DKPLIWCGDLNVSH+EIDVSHPDFFS+AKLNGY PPN EDCGQPGFT AERRR
Sbjct: 214  LEFVQHVDKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYTPPNKEDCGQPGFTPAERRR 273

Query: 327  FSNILSMGKLVDAYRFLHKEQDMECGFSWSGNPIGKYRGKRMRIDYFVVSEQLKGRVLAC 148
            F NIL  GKLVDAYR LHKE+D++ GFSWSG+PIGKYRGKRMRIDYF+VSEQLK R+++C
Sbjct: 274  FGNILFQGKLVDAYRHLHKEKDIDGGFSWSGHPIGKYRGKRMRIDYFLVSEQLKDRIVSC 333

Query: 147  DIHGRGIELEGFYGSDHCPVTLELSSVTSE 58
            ++HGRGIEL+GFYGSDHCPV+LELS   +E
Sbjct: 334  EMHGRGIELDGFYGSDHCPVSLELSEAVAE 363


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