BLASTX nr result

ID: Dioscorea21_contig00011375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011375
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like...   179   4e-43
gb|ABA95537.2| ATP-dependent DNA helicase, RecQ family protein, ...   177   1e-42
gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, ...   177   1e-42
gb|ABA95535.2| ATP-dependent DNA helicase, RecQ family protein, ...   177   1e-42
ref|NP_001068564.1| Os11g0708600 [Oryza sativa Japonica Group] g...   177   1e-42

>ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Brachypodium
            distachyon]
          Length = 704

 Score =  179 bits (455), Expect = 4e-43
 Identities = 104/228 (45%), Positives = 132/228 (57%)
 Frame = -3

Query: 689  KFIVSLLRDMQEIDQRTTMLQXXXXXXXXXXXXKGGTTPPASDXXXXXXXXXXXXXXLGR 510
            K IVSLL+DMQ  DQR T+LQ              G +  A D              + R
Sbjct: 491  KIIVSLLQDMQHNDQRATLLQLVDKFKTKWKH--SGCSNEAVDLKKEEIEQLIVQLIIDR 548

Query: 509  VLKEEFQHTAYATNAYVVLGPLWKQALQGTKPVKLEVCVGKQVNKGSVKAAKRNLTSDLE 330
            VLKEEFQHTAY TNAYV LGPLWK ALQG +PVKL   +  Q   G+ K+ KR+  S+LE
Sbjct: 549  VLKEEFQHTAYTTNAYVALGPLWKLALQGNRPVKLTGAIHSQDTGGASKSTKRSQMSNLE 608

Query: 329  VKLDEFRKELAAGSGGVFPHAVLSAQQICTLSTQKPTNINELEKLIGKVKTEKYGDQIVA 150
             KLD+ R+ +++ +GG+FPHAVLS QQI  LS+ KPT I ELE LIGKVK +KYG  I+ 
Sbjct: 609  AKLDDLRRTISSDNGGIFPHAVLSTQQISLLSSHKPTTIAELENLIGKVKADKYGSDIIE 668

Query: 149  FMQQYLSEQSGSXXXXXXXXXXXXXXXXXXTKKRRKAKDLVVIESSED 6
             MQ  +     S                   K+++K KD+V++ESSE+
Sbjct: 669  VMQSEIDGGKDS--------------GENGAKRQKKDKDVVLVESSEE 702


>gb|ABA95537.2| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
            sativa Japonica Group] gi|215701406|dbj|BAG92830.1|
            unnamed protein product [Oryza sativa Japonica Group]
          Length = 665

 Score =  177 bits (450), Expect = 1e-42
 Identities = 107/229 (46%), Positives = 133/229 (58%), Gaps = 1/229 (0%)
 Frame = -3

Query: 689  KFIVSLLRDMQEIDQRTTMLQXXXXXXXXXXXXKGGTTPPASDXXXXXXXXXXXXXXLGR 510
            K IVSLL D+Q  DQR T+LQ              G +  + D              L R
Sbjct: 449  KIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDL--GCSNESIDLKKEGIEQLVVQLILDR 506

Query: 509  VLKEEFQHTAYATNAYVVLGPLWKQALQGTKPVKLEVCVGKQVNKGSVKAAKRNLTSDLE 330
            VLKEEFQHTAYATNAYV LGPLWK ALQG +PVKL V    Q      K  KRN  S+LE
Sbjct: 507  VLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKGSGSKRTKRNQMSNLE 566

Query: 329  VKLDEFRKELAAGSGGVFPHAVLSAQQICTLSTQKPTNINELEKLIGKVKTEKYGDQIVA 150
             KLD+ R+EL++ +GGVFPHAVLSAQQI  L+ QKPT + ELEKLIGKVKT KYG  I+ 
Sbjct: 567  AKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAELEKLIGKVKTGKYGSAIIE 626

Query: 149  FMQQYL-SEQSGSXXXXXXXXXXXXXXXXXXTKKRRKAKDLVVIESSED 6
             M  ++ SE +G                    ++++  +D++ +ESSE+
Sbjct: 627  LMLLHIDSEVAGG-------------KACASKRQKKDKEDVICVESSEE 662


>gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
            sativa Japonica Group]
          Length = 707

 Score =  177 bits (450), Expect = 1e-42
 Identities = 107/229 (46%), Positives = 133/229 (58%), Gaps = 1/229 (0%)
 Frame = -3

Query: 689  KFIVSLLRDMQEIDQRTTMLQXXXXXXXXXXXXKGGTTPPASDXXXXXXXXXXXXXXLGR 510
            K IVSLL D+Q  DQR T+LQ              G +  + D              L R
Sbjct: 491  KIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDL--GCSNESIDLKKEGIEQLVVQLILDR 548

Query: 509  VLKEEFQHTAYATNAYVVLGPLWKQALQGTKPVKLEVCVGKQVNKGSVKAAKRNLTSDLE 330
            VLKEEFQHTAYATNAYV LGPLWK ALQG +PVKL V    Q      K  KRN  S+LE
Sbjct: 549  VLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKGSGSKRTKRNQMSNLE 608

Query: 329  VKLDEFRKELAAGSGGVFPHAVLSAQQICTLSTQKPTNINELEKLIGKVKTEKYGDQIVA 150
             KLD+ R+EL++ +GGVFPHAVLSAQQI  L+ QKPT + ELEKLIGKVKT KYG  I+ 
Sbjct: 609  AKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAELEKLIGKVKTGKYGSAIIE 668

Query: 149  FMQQYL-SEQSGSXXXXXXXXXXXXXXXXXXTKKRRKAKDLVVIESSED 6
             M  ++ SE +G                    ++++  +D++ +ESSE+
Sbjct: 669  LMLLHIDSEVAGG-------------KACASKRQKKDKEDVICVESSEE 704


>gb|ABA95535.2| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
            sativa Japonica Group]
          Length = 766

 Score =  177 bits (450), Expect = 1e-42
 Identities = 107/229 (46%), Positives = 133/229 (58%), Gaps = 1/229 (0%)
 Frame = -3

Query: 689  KFIVSLLRDMQEIDQRTTMLQXXXXXXXXXXXXKGGTTPPASDXXXXXXXXXXXXXXLGR 510
            K IVSLL D+Q  DQR T+LQ              G +  + D              L R
Sbjct: 550  KIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDL--GCSNESIDLKKEGIEQLVVQLILDR 607

Query: 509  VLKEEFQHTAYATNAYVVLGPLWKQALQGTKPVKLEVCVGKQVNKGSVKAAKRNLTSDLE 330
            VLKEEFQHTAYATNAYV LGPLWK ALQG +PVKL V    Q      K  KRN  S+LE
Sbjct: 608  VLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKGSGSKRTKRNQMSNLE 667

Query: 329  VKLDEFRKELAAGSGGVFPHAVLSAQQICTLSTQKPTNINELEKLIGKVKTEKYGDQIVA 150
             KLD+ R+EL++ +GGVFPHAVLSAQQI  L+ QKPT + ELEKLIGKVKT KYG  I+ 
Sbjct: 668  AKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAELEKLIGKVKTGKYGSAIIE 727

Query: 149  FMQQYL-SEQSGSXXXXXXXXXXXXXXXXXXTKKRRKAKDLVVIESSED 6
             M  ++ SE +G                    ++++  +D++ +ESSE+
Sbjct: 728  LMLLHIDSEVAGG-------------KACASKRQKKDKEDVICVESSEE 763


>ref|NP_001068564.1| Os11g0708600 [Oryza sativa Japonica Group]
            gi|113645786|dbj|BAF28927.1| Os11g0708600, partial [Oryza
            sativa Japonica Group]
          Length = 685

 Score =  177 bits (450), Expect = 1e-42
 Identities = 107/229 (46%), Positives = 133/229 (58%), Gaps = 1/229 (0%)
 Frame = -3

Query: 689  KFIVSLLRDMQEIDQRTTMLQXXXXXXXXXXXXKGGTTPPASDXXXXXXXXXXXXXXLGR 510
            K IVSLL D+Q  DQR T+LQ              G +  + D              L R
Sbjct: 469  KIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDL--GCSNESIDLKKEGIEQLVVQLILDR 526

Query: 509  VLKEEFQHTAYATNAYVVLGPLWKQALQGTKPVKLEVCVGKQVNKGSVKAAKRNLTSDLE 330
            VLKEEFQHTAYATNAYV LGPLWK ALQG +PVKL V    Q      K  KRN  S+LE
Sbjct: 527  VLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKGSGSKRTKRNQMSNLE 586

Query: 329  VKLDEFRKELAAGSGGVFPHAVLSAQQICTLSTQKPTNINELEKLIGKVKTEKYGDQIVA 150
             KLD+ R+EL++ +GGVFPHAVLSAQQI  L+ QKPT + ELEKLIGKVKT KYG  I+ 
Sbjct: 587  AKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAELEKLIGKVKTGKYGSAIIE 646

Query: 149  FMQQYL-SEQSGSXXXXXXXXXXXXXXXXXXTKKRRKAKDLVVIESSED 6
             M  ++ SE +G                    ++++  +D++ +ESSE+
Sbjct: 647  LMLLHIDSEVAGG-------------KACASKRQKKDKEDVICVESSEE 682


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