BLASTX nr result

ID: Dioscorea21_contig00011356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011356
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279098.1| PREDICTED: F-box protein At5g39250 isoform 3...   333   4e-89
ref|XP_002333841.1| predicted protein [Populus trichocarpa] gi|2...   331   1e-88
ref|XP_002324105.1| predicted protein [Populus trichocarpa] gi|2...   330   4e-88
emb|CAN69611.1| hypothetical protein VITISV_043871 [Vitis vinifera]   329   7e-88
ref|XP_002306068.1| predicted protein [Populus trichocarpa] gi|2...   327   2e-87

>ref|XP_002279098.1| PREDICTED: F-box protein At5g39250 isoform 3 [Vitis vinifera]
           gi|225451701|ref|XP_002279074.1| PREDICTED: F-box
           protein At5g39250 isoform 2 [Vitis vinifera]
           gi|225451703|ref|XP_002279063.1| PREDICTED: F-box
           protein At5g39250 isoform 1 [Vitis vinifera]
           gi|296082222|emb|CBI21227.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  333 bits (854), Expect = 4e-89
 Identities = 148/238 (62%), Positives = 199/238 (83%), Gaps = 1/238 (0%)
 Frame = -3

Query: 774 SHGEVLKAIFPLLDGKDLIACMLVCRQWRDIAKDDYFWKCICARRWPSICKRP-PPSLSY 598
           ++ EVLKA+FPLL+G DL +CMLVC+QWRDIA+DDYFWKC+CA+RWPSICKRP PP+++Y
Sbjct: 2   AYEEVLKAVFPLLEGADLASCMLVCKQWRDIAQDDYFWKCVCAKRWPSICKRPSPPTVTY 61

Query: 597 HKLFVTFSKXXXXXXXXXXXLSFNDLEFYVDLWSDDQLLFSEAISGSMLRMGIKTPPPGI 418
           +KL  TF K           LSFNDLEFY+D+W+ ++ +FSE + G +L+ GI  PPPGI
Sbjct: 62  YKLCQTFYKRQHCRALPPPRLSFNDLEFYIDIWTGERSIFSEVVPGPVLQTGIVVPPPGI 121

Query: 417 PEVLRVHLDGPDYKMVMHVDPRFTIPLGRTITVSILIGRRDTNEVACIVNKSVFDYVDGS 238
            ++LR HL+GP+YKM + V+PRFT+PL  T++VS+L+GR+D+ +VACI+NKS+FDY+D +
Sbjct: 122 CDMLRFHLEGPEYKMTLLVEPRFTVPLMATVSVSVLVGRKDSKKVACIINKSMFDYIDRT 181

Query: 237 AFRALAYDYLKFSPGHPFISGIRAWVSLLFMANGNDNIIDVFGIEVDFCDAASSENEV 64
           A+RALA+DYL FSP +PFISGIRAW+SLLFM +GN+ +I+VFG+E+DFCDAA+SE EV
Sbjct: 182 AYRALAFDYLDFSPIYPFISGIRAWISLLFMEDGNEGVINVFGLEMDFCDAANSEPEV 239


>ref|XP_002333841.1| predicted protein [Populus trichocarpa] gi|222838662|gb|EEE77027.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  331 bits (849), Expect = 1e-88
 Identities = 145/238 (60%), Positives = 196/238 (82%), Gaps = 1/238 (0%)
 Frame = -3

Query: 774 SHGEVLKAIFPLLDGKDLIACMLVCRQWRDIAKDDYFWKCICARRWPSICKRP-PPSLSY 598
           S+ E+LKA+FPLL+G DL +C+ VC+QWRDIA+DDY WKC+CA+RWPSICKRP PP+++Y
Sbjct: 2   SYVEILKAVFPLLEGADLASCVAVCKQWRDIAQDDYLWKCLCAKRWPSICKRPNPPTVTY 61

Query: 597 HKLFVTFSKXXXXXXXXXXXLSFNDLEFYVDLWSDDQLLFSEAISGSMLRMGIKTPPPGI 418
           +KL+ TF K           LSF++LEF++D+W+ D+L+FSE +SG +L+ GIK PPP I
Sbjct: 62  YKLYQTFYKHQRQQTLLPPRLSFDNLEFFIDIWTRDKLIFSEVVSGPVLQTGIKCPPPRI 121

Query: 417 PEVLRVHLDGPDYKMVMHVDPRFTIPLGRTITVSILIGRRDTNEVACIVNKSVFDYVDGS 238
            + L  HL+GPDYKM++ V+PRF  PLG T++VS+L+GR+D N+VACI+NKSVFDY+D +
Sbjct: 122 CDRLGFHLEGPDYKMILPVEPRFKAPLGETVSVSVLVGRKDNNKVACIINKSVFDYIDRT 181

Query: 237 AFRALAYDYLKFSPGHPFISGIRAWVSLLFMANGNDNIIDVFGIEVDFCDAASSENEV 64
           A+RA+A+DYL FSP HPF+ GIRAW+SLLF+ + ND+++DVFGIE+DFCDAA S NEV
Sbjct: 182 AYRAMAFDYLGFSPAHPFVPGIRAWISLLFVDDKNDSVLDVFGIEIDFCDAAKSRNEV 239


>ref|XP_002324105.1| predicted protein [Populus trichocarpa] gi|222867107|gb|EEF04238.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  330 bits (845), Expect = 4e-88
 Identities = 144/238 (60%), Positives = 196/238 (82%), Gaps = 1/238 (0%)
 Frame = -3

Query: 774 SHGEVLKAIFPLLDGKDLIACMLVCRQWRDIAKDDYFWKCICARRWPSICKRP-PPSLSY 598
           S+ E+LKA+FPLL+G DL +C+ VC+QWRDIA+DDY WKC+CA+RWPSICKRP PP+++Y
Sbjct: 2   SYVEILKAVFPLLEGADLASCVAVCKQWRDIAQDDYLWKCLCAKRWPSICKRPNPPTVTY 61

Query: 597 HKLFVTFSKXXXXXXXXXXXLSFNDLEFYVDLWSDDQLLFSEAISGSMLRMGIKTPPPGI 418
           +KL+ TF K           LSF++LEF++D+W+ D+L+FSE +SG +L+ GIK PPP I
Sbjct: 62  YKLYQTFYKHQRQQTLLPPRLSFDNLEFFIDIWTGDKLIFSEVVSGPVLQTGIKCPPPRI 121

Query: 417 PEVLRVHLDGPDYKMVMHVDPRFTIPLGRTITVSILIGRRDTNEVACIVNKSVFDYVDGS 238
            + L  HL+GPDYKM++ V+PRF  PLG T++VS+L+GR+D N+VACI+NKSVFDY+D +
Sbjct: 122 CDRLGFHLEGPDYKMILPVEPRFKAPLGETVSVSVLVGRKDNNKVACIINKSVFDYIDRT 181

Query: 237 AFRALAYDYLKFSPGHPFISGIRAWVSLLFMANGNDNIIDVFGIEVDFCDAASSENEV 64
           A+RA+A+DYL FSP HPF+ GIRAW+SLLF+ + ND+++DVFGIE+DFCDAA S +EV
Sbjct: 182 AYRAMAFDYLGFSPAHPFVPGIRAWISLLFVDDKNDSVLDVFGIEIDFCDAAKSRDEV 239


>emb|CAN69611.1| hypothetical protein VITISV_043871 [Vitis vinifera]
          Length = 239

 Score =  329 bits (843), Expect = 7e-88
 Identities = 147/238 (61%), Positives = 198/238 (83%), Gaps = 1/238 (0%)
 Frame = -3

Query: 774 SHGEVLKAIFPLLDGKDLIACMLVCRQWRDIAKDDYFWKCICARRWPSICKRP-PPSLSY 598
           ++ EVLKA+FPLL+G DL +CMLVC+QWRDIA+DDYFWKC+CA+RWPSICKRP PP+++Y
Sbjct: 2   AYEEVLKAVFPLLEGADLASCMLVCKQWRDIAQDDYFWKCVCAKRWPSICKRPSPPTVTY 61

Query: 597 HKLFVTFSKXXXXXXXXXXXLSFNDLEFYVDLWSDDQLLFSEAISGSMLRMGIKTPPPGI 418
           +KL  TF K            SFNDLEFY+D+W+ ++ +FSE + G +L+ GI  PPPGI
Sbjct: 62  YKLCQTFYKHL----------SFNDLEFYIDIWTGERSIFSEVVPGPVLQTGIVVPPPGI 111

Query: 417 PEVLRVHLDGPDYKMVMHVDPRFTIPLGRTITVSILIGRRDTNEVACIVNKSVFDYVDGS 238
            ++LR HL+GP+YKM + V+PRFT+PL  T++VS+L+GR+D+ +VACI+NKS+FDY+D +
Sbjct: 112 CDMLRFHLEGPEYKMTLLVEPRFTVPLMATVSVSVLVGRKDSKKVACIINKSMFDYIDRT 171

Query: 237 AFRALAYDYLKFSPGHPFISGIRAWVSLLFMANGNDNIIDVFGIEVDFCDAASSENEV 64
           A+RALA+DYL FSP +PFISGIRAW+SLLFM +GN+ +I+VFG+E+DFCDAA+SE EV
Sbjct: 172 AYRALAFDYLDFSPIYPFISGIRAWISLLFMEDGNEGVINVFGLEMDFCDAANSEPEV 229


>ref|XP_002306068.1| predicted protein [Populus trichocarpa] gi|222849032|gb|EEE86579.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  327 bits (839), Expect = 2e-87
 Identities = 143/238 (60%), Positives = 194/238 (81%), Gaps = 1/238 (0%)
 Frame = -3

Query: 774 SHGEVLKAIFPLLDGKDLIACMLVCRQWRDIAKDDYFWKCICARRWPSICKRP-PPSLSY 598
           S+ E+LK +FPLL+G DL +CM VC+QWRD+A+DDYFWKC+CA+RWPSICKR  PP+++Y
Sbjct: 2   SYEEILKVVFPLLEGADLASCMAVCKQWRDMAQDDYFWKCVCAKRWPSICKRSDPPTVTY 61

Query: 597 HKLFVTFSKXXXXXXXXXXXLSFNDLEFYVDLWSDDQLLFSEAISGSMLRMGIKTPPPGI 418
           +KL+ TF K           LSF++LEF++D+W+DD+L+FSE + G +L  GIK+PPPGI
Sbjct: 62  YKLYQTFYKRQHRQILLPPRLSFDNLEFFIDIWTDDKLIFSEVVPGPVLHTGIKSPPPGI 121

Query: 417 PEVLRVHLDGPDYKMVMHVDPRFTIPLGRTITVSILIGRRDTNEVACIVNKSVFDYVDGS 238
            + LR  L+GPD KM + V+PRF +PLG T++VS+L+GR+D+N VACI+NKSVFDY+D +
Sbjct: 122 CDRLRFQLEGPDCKMTLPVEPRFKVPLGETVSVSVLVGRKDSNRVACIINKSVFDYIDRT 181

Query: 237 AFRALAYDYLKFSPGHPFISGIRAWVSLLFMANGNDNIIDVFGIEVDFCDAASSENEV 64
           ++RA+A+DYL  SP HPF+ GIRAW+SLLFM + ND++IDVFGIE+DFCDAA S +EV
Sbjct: 182 SYRAMAFDYLGLSPAHPFVPGIRAWISLLFMDDRNDSVIDVFGIEMDFCDAAKSRDEV 239


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