BLASTX nr result

ID: Dioscorea21_contig00011322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011322
         (1292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit ...   355   1e-95
ref|XP_004140517.1| PREDICTED: COP9 signalosome complex subunit ...   351   2e-94
gb|ABK94750.1| unknown [Populus trichocarpa]                          348   1e-93
tpg|DAA40871.1| TPA: hypothetical protein ZEAMMB73_017039 [Zea m...   336   7e-90
ref|NP_001130282.1| uncharacterized protein LOC100191376 [Zea ma...   336   7e-90

>ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 1 [Vitis
           vinifera] gi|297734611|emb|CBI16662.3| unnamed protein
           product [Vitis vinifera]
          Length = 259

 Score =  355 bits (911), Expect = 1e-95
 Identities = 180/275 (65%), Positives = 215/275 (78%), Gaps = 1/275 (0%)
 Frame = +3

Query: 72  MEMEQKQAEIIDRFIKQAEGMEGAPLAALVLEATSHPSLFAFSEILSSPNIPKLQGTRFS 251
           M++EQ+QAE+ID F+KQA    G+ LA ++L+ATSHPSLFAFSEIL+ PN+ +L GT  S
Sbjct: 1   MDIEQRQAELIDAFVKQASTHNGSALATVILDATSHPSLFAFSEILAVPNVVELGGTENS 60

Query: 252 SSIDLLRLFAYGTWSDYKSNSGGLPTLLPDQVLKLKQLSVLTLAETNKVLPYDQLILEID 431
             +D+LRLFA+GTWSDYKSN   LP L+PDQ LKLKQL+VLTLAETNKVLPYDQL+ E+D
Sbjct: 61  VYLDMLRLFAHGTWSDYKSNVDRLPQLVPDQALKLKQLTVLTLAETNKVLPYDQLMQELD 120

Query: 432 VANVRELEDFLINECMYAGIVKGKLDQLRRCFEVQFAAGRDLRPGQLSNMIDTLADWLGN 611
           V NVRELEDFLINECMYAGIV+GKLDQLRRCFEVQFAAGRDLRPGQL  MI TL++WLG 
Sbjct: 121 VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQTLSNWLGT 180

Query: 612 SDNLLQSIQERIRWADRMNEVDKMHRKEIDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXA 791
           SDNLL SIQE+I+WAD M+E+DK HRKE+++R                           A
Sbjct: 181 SDNLLLSIQEKIKWADTMSELDKKHRKEVEER----------------VEEVKKSFSVKA 224

Query: 792 DLNLRGHDETYFEPGRLMDH-EDRSRPKRRRHPMS 893
           D++ RGH+E Y EPG +MD+ EDRSRPKRRRHP+S
Sbjct: 225 DIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPIS 259


>ref|XP_004140517.1| PREDICTED: COP9 signalosome complex subunit 7-like [Cucumis
           sativus] gi|449514708|ref|XP_004164457.1| PREDICTED:
           COP9 signalosome complex subunit 7-like [Cucumis
           sativus]
          Length = 259

 Score =  351 bits (901), Expect = 2e-94
 Identities = 178/275 (64%), Positives = 213/275 (77%), Gaps = 1/275 (0%)
 Frame = +3

Query: 72  MEMEQKQAEIIDRFIKQAEGMEGAPLAALVLEATSHPSLFAFSEILSSPNIPKLQGTRFS 251
           M++EQKQ E ID F+KQA  ++G+ L ++V +ATSHPSLFAFSEIL+ PN+ +L+GT  S
Sbjct: 1   MDIEQKQTEFIDHFVKQASSLKGSALGSVVTDATSHPSLFAFSEILAVPNVVELEGTEHS 60

Query: 252 SSIDLLRLFAYGTWSDYKSNSGGLPTLLPDQVLKLKQLSVLTLAETNKVLPYDQLILEID 431
             +D+LRLFAYGTWSDYKSNS  LP L  DQ LKLKQL+VLTLAETNKVL YDQL+ E+D
Sbjct: 61  IYLDVLRLFAYGTWSDYKSNSSRLPELSSDQALKLKQLTVLTLAETNKVLAYDQLMQELD 120

Query: 432 VANVRELEDFLINECMYAGIVKGKLDQLRRCFEVQFAAGRDLRPGQLSNMIDTLADWLGN 611
           V NVRELEDFLINECMYAGIV+GKLDQLRRCFEVQFAAGRDLRPGQL NMI TL++WL  
Sbjct: 121 VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIRTLSNWLTT 180

Query: 612 SDNLLQSIQERIRWADRMNEVDKMHRKEIDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXA 791
           SDNLL SIQE+I+WAD M+E+DK HRK++DDR                           A
Sbjct: 181 SDNLLVSIQEKIKWADNMSELDKKHRKDVDDR----------------VEEVKKSLSLKA 224

Query: 792 DLNLRGHDETYFEPGRLMDH-EDRSRPKRRRHPMS 893
           ++++R H+E Y EPG +MD+ EDRSRPKRRRHP+S
Sbjct: 225 NIDIREHEEIYSEPGGVMDYEEDRSRPKRRRHPIS 259


>gb|ABK94750.1| unknown [Populus trichocarpa]
          Length = 259

 Score =  348 bits (894), Expect = 1e-93
 Identities = 175/274 (63%), Positives = 214/274 (78%), Gaps = 1/274 (0%)
 Frame = +3

Query: 72  MEMEQKQAEIIDRFIKQAEGMEGAPLAALVLEATSHPSLFAFSEILSSPNIPKLQGTRFS 251
           M++EQKQAE+ID F+ QA  ++ + L  L++EATSHPSLFAFSEILSSP + +L+GT  S
Sbjct: 1   MDIEQKQAELIDHFVNQASTLKASALWPLIIEATSHPSLFAFSEILSSPTVSELEGTENS 60

Query: 252 SSIDLLRLFAYGTWSDYKSNSGGLPTLLPDQVLKLKQLSVLTLAETNKVLPYDQLILEID 431
             +D+LRLFA+GTWSDYKSN+G LP L+PDQVLKLKQL+VLTLAE NKVLPYDQL+ E+D
Sbjct: 61  FCLDVLRLFAHGTWSDYKSNAGRLPQLVPDQVLKLKQLTVLTLAEMNKVLPYDQLMQELD 120

Query: 432 VANVRELEDFLINECMYAGIVKGKLDQLRRCFEVQFAAGRDLRPGQLSNMIDTLADWLGN 611
           V NVRELEDFLINECMYAGIV+GKLDQLRRCFEVQFAAGRDLRPGQL NM+ TL++WL  
Sbjct: 121 VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMLQTLSNWLDT 180

Query: 612 SDNLLQSIQERIRWADRMNEVDKMHRKEIDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXA 791
           SD+LL SIQE+I+WAD  +E+DK H+K+++ R                           A
Sbjct: 181 SDDLLVSIQEKIKWADSTSELDKKHQKDVEYR----------------VEEVKKSLSLKA 224

Query: 792 DLNLRGHDETYFEPGRLMDH-EDRSRPKRRRHPM 890
           D++ RGH+E Y EPG +MD+ EDRSRPKRRRHP+
Sbjct: 225 DIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 258


>tpg|DAA40871.1| TPA: hypothetical protein ZEAMMB73_017039 [Zea mays]
          Length = 260

 Score =  336 bits (862), Expect = 7e-90
 Identities = 176/275 (64%), Positives = 210/275 (76%), Gaps = 2/275 (0%)
 Frame = +3

Query: 69  SMEMEQKQAEIIDRFIKQAEGMEGAP-LAALVLEATSHPSLFAFSEILSSPNIPKLQGTR 245
           +M+ E++QAE+I +F  QA  +  AP LAALVLEATSHP+LFAFSE+L+ P + KL GT+
Sbjct: 2   AMDAERRQAELIAQFSAQAAALSSAPQLAALVLEATSHPALFAFSELLTLPALSKLTGTQ 61

Query: 246 FSSSIDLLRLFAYGTWSDYKSNSGGLPTLLPDQVLKLKQLSVLTLAETNKVLPYDQLILE 425
           ++SS+DLLRLFAYGT +DYKSNSG LP LLPDQV KLKQLSVLTLAE+ K+LPYDQL+ E
Sbjct: 62  YASSLDLLRLFAYGTLNDYKSNSGFLPALLPDQVRKLKQLSVLTLAESTKILPYDQLMQE 121

Query: 426 IDVANVRELEDFLINECMYAGIVKGKLDQLRRCFEVQFAAGRDLRPGQLSNMIDTLADWL 605
           +DV+NVRELEDFLINECMY+GIV+GKLDQLRRCFEVQFAAGRDL P QL NMI+TL+DWL
Sbjct: 122 LDVSNVRELEDFLINECMYSGIVRGKLDQLRRCFEVQFAAGRDLTPDQLKNMIETLSDWL 181

Query: 606 GNSDNLLQSIQERIRWADRMNEVDKMHRKEIDDRXXXXXXXXXXXXXXXXXXXXXXXXXX 785
           G SD LL  IQE+I+WAD M+EV+K H+KE +DR                          
Sbjct: 182 GTSDRLLHQIQEKIKWADTMSEVNKKHQKEFEDR------------------VEEAKKSI 223

Query: 786 XADLNLRGHDETYFEPGRLMD-HEDRSRPKRRRHP 887
            AD++LRGHDE   E G +MD  EDR RPKRRR P
Sbjct: 224 KADIDLRGHDEFLSESGGIMDFEEDRVRPKRRRQP 258


>ref|NP_001130282.1| uncharacterized protein LOC100191376 [Zea mays]
           gi|194688740|gb|ACF78454.1| unknown [Zea mays]
           gi|195632552|gb|ACG36712.1| COP9 signalosome complex
           subunit 7 [Zea mays] gi|414590301|tpg|DAA40872.1| TPA:
           COP9 signalosome complex subunit 7 [Zea mays]
          Length = 261

 Score =  336 bits (862), Expect = 7e-90
 Identities = 176/275 (64%), Positives = 210/275 (76%), Gaps = 2/275 (0%)
 Frame = +3

Query: 69  SMEMEQKQAEIIDRFIKQAEGMEGAP-LAALVLEATSHPSLFAFSEILSSPNIPKLQGTR 245
           +M+ E++QAE+I +F  QA  +  AP LAALVLEATSHP+LFAFSE+L+ P + KL GT+
Sbjct: 2   AMDAERRQAELIAQFSAQAAALSSAPQLAALVLEATSHPALFAFSELLTLPALSKLTGTQ 61

Query: 246 FSSSIDLLRLFAYGTWSDYKSNSGGLPTLLPDQVLKLKQLSVLTLAETNKVLPYDQLILE 425
           ++SS+DLLRLFAYGT +DYKSNSG LP LLPDQV KLKQLSVLTLAE+ K+LPYDQL+ E
Sbjct: 62  YASSLDLLRLFAYGTLNDYKSNSGFLPALLPDQVRKLKQLSVLTLAESTKILPYDQLMQE 121

Query: 426 IDVANVRELEDFLINECMYAGIVKGKLDQLRRCFEVQFAAGRDLRPGQLSNMIDTLADWL 605
           +DV+NVRELEDFLINECMY+GIV+GKLDQLRRCFEVQFAAGRDL P QL NMI+TL+DWL
Sbjct: 122 LDVSNVRELEDFLINECMYSGIVRGKLDQLRRCFEVQFAAGRDLTPDQLKNMIETLSDWL 181

Query: 606 GNSDNLLQSIQERIRWADRMNEVDKMHRKEIDDRXXXXXXXXXXXXXXXXXXXXXXXXXX 785
           G SD LL  IQE+I+WAD M+EV+K H+KE +DR                          
Sbjct: 182 GTSDRLLHQIQEKIKWADTMSEVNKKHQKEFEDR-----------------VEEAKKSIK 224

Query: 786 XADLNLRGHDETYFEPGRLMD-HEDRSRPKRRRHP 887
            AD++LRGHDE   E G +MD  EDR RPKRRR P
Sbjct: 225 QADIDLRGHDEFLSESGGIMDFEEDRVRPKRRRQP 259


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