BLASTX nr result

ID: Dioscorea21_contig00011321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011321
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001189965.1| Helicase/SANT-associated, DNA binding protei...    77   2e-12
ref|NP_189131.5| Helicase/SANT-associated, DNA binding protein [...    77   2e-12
ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...    75   7e-12
emb|CBI37340.3| unnamed protein product [Vitis vinifera]               75   7e-12
emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]    75   7e-12

>ref|NP_001189965.1| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana]
            gi|332643435|gb|AEE76956.1| Helicase/SANT-associated, DNA
            binding protein [Arabidopsis thaliana]
          Length = 1899

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/77 (53%), Positives = 50/77 (64%)
 Frame = +2

Query: 2    LQGPMEEDTLKVHFEKMILIRRQRHSCRSQYHFPHSCWTLRS*CFVKNDGQEMKQIVPAH 181
            LQGPMEEDTLK HFEK+ LI ++ H  ++Q                 NDG++ KQIVP H
Sbjct: 1136 LQGPMEEDTLKSHFEKICLIGKKLHYRKTQ-----------------NDGRDPKQIVPVH 1178

Query: 182  NSHVVALSQVIPNNLSG 232
            NS V+ALSQV PNNL+G
Sbjct: 1179 NSQVMALSQVFPNNLNG 1195


>ref|NP_189131.5| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana]
            gi|332643434|gb|AEE76955.1| Helicase/SANT-associated, DNA
            binding protein [Arabidopsis thaliana]
          Length = 1907

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/77 (53%), Positives = 50/77 (64%)
 Frame = +2

Query: 2    LQGPMEEDTLKVHFEKMILIRRQRHSCRSQYHFPHSCWTLRS*CFVKNDGQEMKQIVPAH 181
            LQGPMEEDTLK HFEK+ LI ++ H  ++Q                 NDG++ KQIVP H
Sbjct: 1142 LQGPMEEDTLKSHFEKICLIGKKLHYRKTQ-----------------NDGRDPKQIVPVH 1184

Query: 182  NSHVVALSQVIPNNLSG 232
            NS V+ALSQV PNNL+G
Sbjct: 1185 NSQVMALSQVFPNNLNG 1201


>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/77 (53%), Positives = 47/77 (61%)
 Frame = +2

Query: 2    LQGPMEEDTLKVHFEKMILIRRQRHSCRSQYHFPHSCWTLRS*CFVKNDGQEMKQIVPAH 181
            LQGPM E+TLK HFEK+ILI +Q H  RSQ                 ND QE KQ+ P H
Sbjct: 1203 LQGPMLEETLKSHFEKIILIGQQHHYRRSQ-----------------NDNQEPKQLAPVH 1245

Query: 182  NSHVVALSQVIPNNLSG 232
             SHV AL+QV PNNL+G
Sbjct: 1246 GSHVFALTQVCPNNLNG 1262


>emb|CBI37340.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/77 (53%), Positives = 47/77 (61%)
 Frame = +2

Query: 2    LQGPMEEDTLKVHFEKMILIRRQRHSCRSQYHFPHSCWTLRS*CFVKNDGQEMKQIVPAH 181
            LQGPM E+TLK HFEK+ILI +Q H  RSQ                 ND QE KQ+ P H
Sbjct: 1128 LQGPMLEETLKSHFEKIILIGQQHHYRRSQ-----------------NDNQEPKQLAPVH 1170

Query: 182  NSHVVALSQVIPNNLSG 232
             SHV AL+QV PNNL+G
Sbjct: 1171 GSHVFALTQVCPNNLNG 1187


>emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]
          Length = 2257

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/77 (51%), Positives = 47/77 (61%)
 Frame = +2

Query: 2    LQGPMEEDTLKVHFEKMILIRRQRHSCRSQYHFPHSCWTLRS*CFVKNDGQEMKQIVPAH 181
            LQGPM E+TLK HFEK+ILI +Q H  RSQ                 ND QE KQ+ P H
Sbjct: 1189 LQGPMLEETLKSHFEKIILIGQQHHYRRSQ-----------------NDNQETKQLAPVH 1231

Query: 182  NSHVVALSQVIPNNLSG 232
             SH+ AL+QV PNNL+G
Sbjct: 1232 GSHIFALTQVCPNNLNG 1248


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