BLASTX nr result
ID: Dioscorea21_contig00011303
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00011303 (210 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare] 78 6e-13 ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [S... 78 6e-13 ref|XP_002301171.1| predicted protein [Populus trichocarpa] gi|2... 78 8e-13 gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis] 77 1e-12 gb|AFP74112.1| poly-A binding protein, partial [Nicotiana bentha... 77 1e-12 >dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 746 Score = 78.2 bits (191), Expect = 6e-13 Identities = 42/58 (72%), Positives = 48/58 (82%) Frame = -3 Query: 208 LEMDQTEVLHLLESPDALKAKVAEAMEVLRSVTXXXXXQPNAPSDHLAALSLNDGIIS 35 LEMDQTEVLHLLESP+ALK+KVAEAM+VLR+V PNAP+ LA LSL+DGIIS Sbjct: 691 LEMDQTEVLHLLESPEALKSKVAEAMDVLRNVA--QQQNPNAPTSQLAGLSLSDGIIS 746 >ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor] gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor] Length = 664 Score = 78.2 bits (191), Expect = 6e-13 Identities = 42/58 (72%), Positives = 48/58 (82%) Frame = -3 Query: 208 LEMDQTEVLHLLESPDALKAKVAEAMEVLRSVTXXXXXQPNAPSDHLAALSLNDGIIS 35 LEMDQTEVLHLLESPDALK+KVAEAM+VLR+V PN P++ LAALSL +GIIS Sbjct: 609 LEMDQTEVLHLLESPDALKSKVAEAMDVLRNVA--HQQNPNTPTNQLAALSLTEGIIS 664 >ref|XP_002301171.1| predicted protein [Populus trichocarpa] gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa] Length = 657 Score = 77.8 bits (190), Expect = 8e-13 Identities = 41/58 (70%), Positives = 48/58 (82%) Frame = -3 Query: 208 LEMDQTEVLHLLESPDALKAKVAEAMEVLRSVTXXXXXQPNAPSDHLAALSLNDGIIS 35 LEMDQTEVLHLLESP+ALKAKVAEAMEVLR+V N P+DHLA+LSLN+ ++S Sbjct: 596 LEMDQTEVLHLLESPEALKAKVAEAMEVLRTVAAQQQI--NNPADHLASLSLNENLVS 651 >gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis] Length = 652 Score = 77.4 bits (189), Expect = 1e-12 Identities = 41/58 (70%), Positives = 48/58 (82%) Frame = -3 Query: 208 LEMDQTEVLHLLESPDALKAKVAEAMEVLRSVTXXXXXQPNAPSDHLAALSLNDGIIS 35 LEMDQTEVLHLLESP+ALKAKVAEAMEVLR+V P +P+D +A+LSLND I+S Sbjct: 596 LEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGP-SPTDRVASLSLNDNIVS 652 >gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana] Length = 643 Score = 77.0 bits (188), Expect = 1e-12 Identities = 42/58 (72%), Positives = 50/58 (86%) Frame = -3 Query: 208 LEMDQTEVLHLLESPDALKAKVAEAMEVLRSVTXXXXXQPNAPSDHLAALSLNDGIIS 35 LEMDQTEVLHLLESP+ALKAKVAEAMEVLR+V+ Q + P+D LA+LSLNDG++S Sbjct: 589 LEMDQTEVLHLLESPEALKAKVAEAMEVLRNVS---QQQSSNPADQLASLSLNDGLVS 643