BLASTX nr result
ID: Dioscorea21_contig00011302
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00011302 (204 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare] 91 1e-16 ref|XP_002301171.1| predicted protein [Populus trichocarpa] gi|2... 89 4e-16 ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [S... 89 5e-16 gb|AFP74112.1| poly-A binding protein, partial [Nicotiana bentha... 87 1e-15 gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nicotiana taba... 87 1e-15 >dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 746 Score = 90.5 bits (223), Expect = 1e-16 Identities = 45/56 (80%), Positives = 51/56 (91%) Frame = -3 Query: 202 LEMDQTEVLHLLESPDALKAKVAEAMEVLRSVTQQQQPNAPSDHLAALSLNDGIIS 35 LEMDQTEVLHLLESP+ALK+KVAEAM+VLR+V QQQ PNAP+ LA LSL+DGIIS Sbjct: 691 LEMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQQNPNAPTSQLAGLSLSDGIIS 746 >ref|XP_002301171.1| predicted protein [Populus trichocarpa] gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa] Length = 657 Score = 89.0 bits (219), Expect = 4e-16 Identities = 44/56 (78%), Positives = 51/56 (91%) Frame = -3 Query: 202 LEMDQTEVLHLLESPDALKAKVAEAMEVLRSVTQQQQPNAPSDHLAALSLNDGIIS 35 LEMDQTEVLHLLESP+ALKAKVAEAMEVLR+V QQQ N P+DHLA+LSLN+ ++S Sbjct: 596 LEMDQTEVLHLLESPEALKAKVAEAMEVLRTVAAQQQINNPADHLASLSLNENLVS 651 >ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor] gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor] Length = 664 Score = 88.6 bits (218), Expect = 5e-16 Identities = 44/56 (78%), Positives = 50/56 (89%) Frame = -3 Query: 202 LEMDQTEVLHLLESPDALKAKVAEAMEVLRSVTQQQQPNAPSDHLAALSLNDGIIS 35 LEMDQTEVLHLLESPDALK+KVAEAM+VLR+V QQ PN P++ LAALSL +GIIS Sbjct: 609 LEMDQTEVLHLLESPDALKSKVAEAMDVLRNVAHQQNPNTPTNQLAALSLTEGIIS 664 >gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana] Length = 643 Score = 87.4 bits (215), Expect = 1e-15 Identities = 45/56 (80%), Positives = 52/56 (92%) Frame = -3 Query: 202 LEMDQTEVLHLLESPDALKAKVAEAMEVLRSVTQQQQPNAPSDHLAALSLNDGIIS 35 LEMDQTEVLHLLESP+ALKAKVAEAMEVLR+V+QQQ N P+D LA+LSLNDG++S Sbjct: 589 LEMDQTEVLHLLESPEALKAKVAEAMEVLRNVSQQQSSN-PADQLASLSLNDGLVS 643 >gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nicotiana tabacum] Length = 330 Score = 87.4 bits (215), Expect = 1e-15 Identities = 45/56 (80%), Positives = 52/56 (92%) Frame = -3 Query: 202 LEMDQTEVLHLLESPDALKAKVAEAMEVLRSVTQQQQPNAPSDHLAALSLNDGIIS 35 LEMDQTEVLHLLESP+ALKAKVAEAMEVLR+V+QQQ N P+D LA+LSLNDG++S Sbjct: 276 LEMDQTEVLHLLESPEALKAKVAEAMEVLRNVSQQQSSN-PADQLASLSLNDGLVS 330