BLASTX nr result

ID: Dioscorea21_contig00011293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011293
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23...   171   6e-41
ref|XP_002529115.1| uv excision repair protein rad23, putative [...   170   2e-40
ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycin...   168   7e-40
gb|ACU18529.1| unknown [Glycine max]                                  167   9e-40
ref|XP_003536688.1| PREDICTED: putative DNA repair protein RAD23...   167   1e-39

>ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23-3 [Vitis vinifera]
           gi|297737829|emb|CBI27030.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score =  171 bits (434), Expect = 6e-41
 Identities = 82/103 (79%), Positives = 92/103 (89%)
 Frame = -1

Query: 586 LQPMLQELGKQNPQIIRHIQEHQAEFLRLINEPTEGADSNLLSQLAAAMPQTVTVTPEER 407
           LQPMLQELGKQNPQ++R IQEHQA+FLRLINEP EG + N+L QLAAAMPQ VTVTPEER
Sbjct: 295 LQPMLQELGKQNPQLMRLIQEHQADFLRLINEPVEGGEGNILGQLAAAMPQAVTVTPEER 354

Query: 406 DAIERLVALGFERPLVLEAYFACNKNEEQAANYLLDHMHEFDD 278
           +AI RL A+GF+R LVLE +FACNKNEE AANYLLDHMHEF+D
Sbjct: 355 EAIARLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEFED 397


>ref|XP_002529115.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223531394|gb|EEF33228.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 409

 Score =  170 bits (430), Expect = 2e-40
 Identities = 80/103 (77%), Positives = 91/103 (88%)
 Frame = -1

Query: 586 LQPMLQELGKQNPQIIRHIQEHQAEFLRLINEPTEGADSNLLSQLAAAMPQTVTVTPEER 407
           LQPMLQELGKQNP ++R IQEHQ +FLRLINEP EG + N++ QLAAAMPQ VTVTPEER
Sbjct: 307 LQPMLQELGKQNPNLVRLIQEHQTDFLRLINEPVEGGEGNIMGQLAAAMPQAVTVTPEER 366

Query: 406 DAIERLVALGFERPLVLEAYFACNKNEEQAANYLLDHMHEFDD 278
           +AIERL A+GF+R LVLE +FACNKNEE AANYLLDHMHEF+D
Sbjct: 367 EAIERLEAMGFDRGLVLEVFFACNKNEELAANYLLDHMHEFED 409


>ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycine max]
           gi|255644546|gb|ACU22776.1| unknown [Glycine max]
          Length = 392

 Score =  168 bits (425), Expect = 7e-40
 Identities = 80/103 (77%), Positives = 89/103 (86%)
 Frame = -1

Query: 586 LQPMLQELGKQNPQIIRHIQEHQAEFLRLINEPTEGADSNLLSQLAAAMPQTVTVTPEER 407
           LQPMLQELGKQNP ++R IQEHQ +FLRLINEP EG + N+L QLA+AMPQ VTVTPEER
Sbjct: 290 LQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGGEGNILGQLASAMPQAVTVTPEER 349

Query: 406 DAIERLVALGFERPLVLEAYFACNKNEEQAANYLLDHMHEFDD 278
            AIERL A+GF+R  VLE YFACNKNEE AANYLLDHMHEFD+
Sbjct: 350 QAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDHMHEFDE 392


>gb|ACU18529.1| unknown [Glycine max]
          Length = 382

 Score =  167 bits (424), Expect = 9e-40
 Identities = 80/103 (77%), Positives = 88/103 (85%)
 Frame = -1

Query: 586 LQPMLQELGKQNPQIIRHIQEHQAEFLRLINEPTEGADSNLLSQLAAAMPQTVTVTPEER 407
           LQPMLQELGKQNP ++R IQEHQ +FLRLINEP EG + N+L QLA AMPQ VTVTPEER
Sbjct: 280 LQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGGEGNILGQLAGAMPQAVTVTPEER 339

Query: 406 DAIERLVALGFERPLVLEAYFACNKNEEQAANYLLDHMHEFDD 278
            AIERL A+GF+R  VLE YFACNKNEE AANYLLDHMHEFD+
Sbjct: 340 QAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDHMHEFDE 382


>ref|XP_003536688.1| PREDICTED: putative DNA repair protein RAD23-3-like [Glycine max]
          Length = 408

 Score =  167 bits (423), Expect = 1e-39
 Identities = 78/103 (75%), Positives = 92/103 (89%)
 Frame = -1

Query: 586 LQPMLQELGKQNPQIIRHIQEHQAEFLRLINEPTEGADSNLLSQLAAAMPQTVTVTPEER 407
           LQPMLQELGKQNP ++R I++HQA+FLRLINEP EGA+ N+L Q+A+AMPQ VTVTPEER
Sbjct: 305 LQPMLQELGKQNPHLMRLIRDHQADFLRLINEPAEGAEGNILGQMASAMPQAVTVTPEER 364

Query: 406 DAIERLVALGFERPLVLEAYFACNKNEEQAANYLLDHMHEFDD 278
            AIERL A+GF+R +VLE YFACNKNEE AANYLLDHMHEF++
Sbjct: 365 QAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFEE 407


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