BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011263
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267236.1| PREDICTED: 5'-3' exonuclease-like [Vitis vin...   406   e-111
emb|CBI18184.3| unnamed protein product [Vitis vinifera]              406   e-111
gb|ABK93472.1| unknown [Populus trichocarpa]                          398   e-108
gb|EEC71889.1| hypothetical protein OsI_04629 [Oryza sativa Indi...   398   e-108
ref|NP_001044959.1| Os01g0874800 [Oryza sativa Japonica Group] g...   397   e-108

>ref|XP_002267236.1| PREDICTED: 5'-3' exonuclease-like [Vitis vinifera]
          Length = 366

 Score =  406 bits (1043), Expect = e-111
 Identities = 202/280 (72%), Positives = 230/280 (82%), Gaps = 4/280 (1%)
 Frame = -3

Query: 891 SKPRVFLLDVNPLCYEGSKPSLSSFARWLSLFFAEVSLQDPVIAVLDGEEGNEYRRMLMP 712
           SK RVF LDVNPLCY GS PSL SF  W+SLFF +VSL DPVIAV+DGE  NEYR+ L+P
Sbjct: 67  SKKRVFFLDVNPLCYTGSTPSLHSFGHWVSLFFQQVSLSDPVIAVIDGERCNEYRQKLLP 126

Query: 711 SYKAHRRKFLRAMNSGQ----SLNTSEAQVTDVLQKCHVPVIKVNGYEADDVVATLMDQV 544
           SYKAHRRKF + + S +    S   S   V DVL+KC+VPV+K+ G EADDVVATL+ QV
Sbjct: 127 SYKAHRRKFSKQLPSQRFSSVSAGRSRQVVRDVLRKCNVPVLKIEGCEADDVVATLVGQV 186

Query: 543 LQRGFRVVIGSPDKDFKQLISEDVQMVMPLQEFGRWSFYTLKHYIAQYNSDPSSDLSLRC 364
           LQRG+RVVI SPDKDFKQLISE+VQ+VMP+ EFGRWSFYTLKHYIAQYN DP SDLSLRC
Sbjct: 187 LQRGYRVVIASPDKDFKQLISEEVQIVMPMPEFGRWSFYTLKHYIAQYNCDPCSDLSLRC 246

Query: 363 LIGDEVDGVPGIQHVAPSFGRKTAQKLLKKHGSLPNLLAAAAIRTVGKQYVQEALNKHAD 184
           ++GDEVDGVPGIQHVAP FGRKTA KLLKKHGSL NLL AAA+RTVG+QY Q AL K+AD
Sbjct: 247 IMGDEVDGVPGIQHVAPGFGRKTALKLLKKHGSLENLLNAAAVRTVGRQYAQNALTKYAD 306

Query: 183 YLRKNYDVLSLRRDAAVHLQEEWLLKRDPSNDSNVLSSHF 64
           +LR+NY++LSLRRD  V L+EEWL  RD  NDS VLS+ F
Sbjct: 307 FLRRNYEILSLRRDVDVQLEEEWLFDRDSRNDSVVLSNFF 346


>emb|CBI18184.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  406 bits (1043), Expect = e-111
 Identities = 202/280 (72%), Positives = 230/280 (82%), Gaps = 4/280 (1%)
 Frame = -3

Query: 891 SKPRVFLLDVNPLCYEGSKPSLSSFARWLSLFFAEVSLQDPVIAVLDGEEGNEYRRMLMP 712
           SK RVF LDVNPLCY GS PSL SF  W+SLFF +VSL DPVIAV+DGE  NEYR+ L+P
Sbjct: 81  SKKRVFFLDVNPLCYTGSTPSLHSFGHWVSLFFQQVSLSDPVIAVIDGERCNEYRQKLLP 140

Query: 711 SYKAHRRKFLRAMNSGQ----SLNTSEAQVTDVLQKCHVPVIKVNGYEADDVVATLMDQV 544
           SYKAHRRKF + + S +    S   S   V DVL+KC+VPV+K+ G EADDVVATL+ QV
Sbjct: 141 SYKAHRRKFSKQLPSQRFSSVSAGRSRQVVRDVLRKCNVPVLKIEGCEADDVVATLVGQV 200

Query: 543 LQRGFRVVIGSPDKDFKQLISEDVQMVMPLQEFGRWSFYTLKHYIAQYNSDPSSDLSLRC 364
           LQRG+RVVI SPDKDFKQLISE+VQ+VMP+ EFGRWSFYTLKHYIAQYN DP SDLSLRC
Sbjct: 201 LQRGYRVVIASPDKDFKQLISEEVQIVMPMPEFGRWSFYTLKHYIAQYNCDPCSDLSLRC 260

Query: 363 LIGDEVDGVPGIQHVAPSFGRKTAQKLLKKHGSLPNLLAAAAIRTVGKQYVQEALNKHAD 184
           ++GDEVDGVPGIQHVAP FGRKTA KLLKKHGSL NLL AAA+RTVG+QY Q AL K+AD
Sbjct: 261 IMGDEVDGVPGIQHVAPGFGRKTALKLLKKHGSLENLLNAAAVRTVGRQYAQNALTKYAD 320

Query: 183 YLRKNYDVLSLRRDAAVHLQEEWLLKRDPSNDSNVLSSHF 64
           +LR+NY++LSLRRD  V L+EEWL  RD  NDS VLS+ F
Sbjct: 321 FLRRNYEILSLRRDVDVQLEEEWLFDRDSRNDSVVLSNFF 360


>gb|ABK93472.1| unknown [Populus trichocarpa]
          Length = 375

 Score =  398 bits (1023), Expect = e-108
 Identities = 194/278 (69%), Positives = 230/278 (82%), Gaps = 1/278 (0%)
 Frame = -3

Query: 894 SSKPRVFLLDVNPLCYEGSKPSLSSFARWLSLFFAEVSLQDPVIAVLDGEEGNEYRRMLM 715
           +SK RVF LDVNPLCY GS PSL SFA W+SLFF++VSL DPVIAVLDG+ G+E+RR L+
Sbjct: 78  ASKKRVFFLDVNPLCYAGSTPSLHSFAHWISLFFSQVSLTDPVIAVLDGDGGSEHRRQLL 137

Query: 714 PSYKAHRRKFLRAMNSGQSLNTSEAQVT-DVLQKCHVPVIKVNGYEADDVVATLMDQVLQ 538
           PSYKAHRRKF R  ++ Q      + V  DVL KC+VPV+K+ G+EADDVVATL  QVLQ
Sbjct: 138 PSYKAHRRKFSRKSSAPQKYPAERSHVVMDVLTKCNVPVVKIEGHEADDVVATLAGQVLQ 197

Query: 537 RGFRVVIGSPDKDFKQLISEDVQMVMPLQEFGRWSFYTLKHYIAQYNSDPSSDLSLRCLI 358
            G +VVI SPDKDFKQLISEDVQ+V+P+ E  RWSFYTLKHYI+QYN DP SDLS RC++
Sbjct: 198 NGHKVVIASPDKDFKQLISEDVQIVLPIAELNRWSFYTLKHYISQYNCDPCSDLSFRCIM 257

Query: 357 GDEVDGVPGIQHVAPSFGRKTAQKLLKKHGSLPNLLAAAAIRTVGKQYVQEALNKHADYL 178
           GDEVDGVPGIQ+VAP FGRKTA KLLKKHGSL NLL AAA+RTVGK+Y Q+AL KH+DYL
Sbjct: 258 GDEVDGVPGIQNVAPGFGRKTALKLLKKHGSLQNLLDAAAVRTVGKKYAQDALTKHSDYL 317

Query: 177 RKNYDVLSLRRDAAVHLQEEWLLKRDPSNDSNVLSSHF 64
           R+NY++L+LRRD  V L+EEWL++RD  NDS +LS+ F
Sbjct: 318 RRNYEILALRRDVDVQLKEEWLVERDRCNDSIILSNFF 355


>gb|EEC71889.1| hypothetical protein OsI_04629 [Oryza sativa Indica Group]
          Length = 356

 Score =  398 bits (1022), Expect = e-108
 Identities = 205/322 (63%), Positives = 247/322 (76%), Gaps = 7/322 (2%)
 Frame = -3

Query: 978 PARLAVAAHRAPHGVIASQRNLNKHLQGS-------SKPRVFLLDVNPLCYEGSKPSLSS 820
           P+ LAV+    P       R+  K L G        +KPRVF LDVNPLC+ GS+ SL +
Sbjct: 48  PSTLAVSIPPPPPA-----RHSRKQLVGRDGAPAKPAKPRVFFLDVNPLCFRGSQRSLGA 102

Query: 819 FARWLSLFFAEVSLQDPVIAVLDGEEGNEYRRMLMPSYKAHRRKFLRAMNSGQSLNTSEA 640
           FARWL+LFFA VSL+DPV+AVLDGE GNEYRR L+PSYKAHR    R   +G     +++
Sbjct: 103 FARWLALFFAHVSLRDPVVAVLDGEGGNEYRRRLLPSYKAHRP---RGPGTG-----ADS 154

Query: 639 QVTDVLQKCHVPVIKVNGYEADDVVATLMDQVLQRGFRVVIGSPDKDFKQLISEDVQMVM 460
           +V DVL++C+VPV++V+GYEADDVVATL +QVLQ+GFRVVIGSPDKDFKQLISEDVQ+VM
Sbjct: 155 RVIDVLRECNVPVVRVDGYEADDVVATLTEQVLQKGFRVVIGSPDKDFKQLISEDVQLVM 214

Query: 459 PLQEFGRWSFYTLKHYIAQYNSDPSSDLSLRCLIGDEVDGVPGIQHVAPSFGRKTAQKLL 280
           P+ E GRWSFYTL+HY+AQY  DP++DLSLRC IGDE DGVPGIQH+ P FGRKTA KLL
Sbjct: 215 PIPEIGRWSFYTLRHYVAQYKCDPTADLSLRCFIGDEADGVPGIQHLVPGFGRKTAVKLL 274

Query: 279 KKHGSLPNLLAAAAIRTVGKQYVQEALNKHADYLRKNYDVLSLRRDAAVHLQEEWLLKRD 100
           KKHGSL NLL  AA+RTVGK Y Q+AL KHADYLRKNY+VLSL+RD  V L + WL  RD
Sbjct: 275 KKHGSLENLLNTAAVRTVGKDYAQDALVKHADYLRKNYEVLSLKRDVKVQLDDRWLSTRD 334

Query: 99  PSNDSNVLSSHFVQRPSKSYNL 34
             NDS+VLS  F+ + ++  N+
Sbjct: 335 SCNDSSVLSD-FILKFNEGQNI 355


>ref|NP_001044959.1| Os01g0874800 [Oryza sativa Japonica Group]
           gi|56784844|dbj|BAD82084.1| putative DNA polymerase I
           3'-5' exo domain [Oryza sativa Japonica Group]
           gi|113534490|dbj|BAF06873.1| Os01g0874800 [Oryza sativa
           Japonica Group] gi|215740431|dbj|BAG97087.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 358

 Score =  397 bits (1020), Expect = e-108
 Identities = 195/286 (68%), Positives = 235/286 (82%)
 Frame = -3

Query: 891 SKPRVFLLDVNPLCYEGSKPSLSSFARWLSLFFAEVSLQDPVIAVLDGEEGNEYRRMLMP 712
           +KPRVF LDVNPLC+ GS+ SL +FARWL+LFFA VSL+DPV+AVLDGE GNEYRR L+P
Sbjct: 79  AKPRVFFLDVNPLCFRGSQRSLGAFARWLALFFAHVSLRDPVVAVLDGEGGNEYRRRLLP 138

Query: 711 SYKAHRRKFLRAMNSGQSLNTSEAQVTDVLQKCHVPVIKVNGYEADDVVATLMDQVLQRG 532
           SYKAHR    R   +G     ++++V DVL++C+VPV++V+GYEADDVVATL +QVLQ+G
Sbjct: 139 SYKAHRP---RGPGTG-----ADSRVIDVLRECNVPVVRVDGYEADDVVATLTEQVLQKG 190

Query: 531 FRVVIGSPDKDFKQLISEDVQMVMPLQEFGRWSFYTLKHYIAQYNSDPSSDLSLRCLIGD 352
           FRVVIGSPDKDFKQLISEDVQ+VMP+ E GRWSFYTL+HY+AQY  DP++DLSLRC IGD
Sbjct: 191 FRVVIGSPDKDFKQLISEDVQLVMPIPEIGRWSFYTLRHYVAQYKCDPTADLSLRCFIGD 250

Query: 351 EVDGVPGIQHVAPSFGRKTAQKLLKKHGSLPNLLAAAAIRTVGKQYVQEALNKHADYLRK 172
           E DG+PGIQH+ P FGRKTA KLLKKHGSL NLL  AA+RTVGK Y Q+AL KHADYLRK
Sbjct: 251 EADGIPGIQHLVPGFGRKTAVKLLKKHGSLENLLNTAAVRTVGKDYAQDALVKHADYLRK 310

Query: 171 NYDVLSLRRDAAVHLQEEWLLKRDPSNDSNVLSSHFVQRPSKSYNL 34
           NY+VLSL+RD  V L + WL  RD  NDS+VLS  F+ + ++  N+
Sbjct: 311 NYEVLSLKRDVKVQLDDRWLSTRDSCNDSSVLSD-FILKFNEGQNI 355