BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011236
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...   243   5e-62
dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]    236   3e-60
ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea ...   235   7e-60
ref|XP_003578264.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   234   2e-59
tpg|DAA61870.1| TPA: putative RING zinc finger domain superfamil...   227   2e-57

>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
           gi|223548304|gb|EEF49795.1| ring finger protein,
           putative [Ricinus communis]
          Length = 380

 Score =  243 bits (619), Expect = 5e-62
 Identities = 139/264 (52%), Positives = 163/264 (61%), Gaps = 16/264 (6%)
 Frame = -1

Query: 805 SMAIIIVVLISAFFFLGFFSIYIRQCXXXXXXXXXGTL--GGRSRRGVAQRGLDPEVLET 632
           SMAIIIVVLI+A FF+GFFS+YIR C           L  GGRSRR  A RGLD  V+ET
Sbjct: 43  SMAIIIVVLIAALFFMGFFSVYIRHCANSSNGVSVQGLANGGRSRRAAAARGLDAAVIET 102

Query: 631 FPTLAYSEVKNLKIGKGTLECAVCLSEFEEDETLRLLPKCSHVFHPDCIDAWLVSHVTCP 452
           FPTL YSEVK LKIGKG LECAVCL EFE+DETLRLLPKC HVFHPDCIDAWL SH TCP
Sbjct: 103 FPTLVYSEVKGLKIGKGALECAVCLCEFEDDETLRLLPKCDHVFHPDCIDAWLASHTTCP 162

Query: 451 VCRSNLAADPI----------PASGTDGEDCLAAAVVVDPEP----LDQVAIAMXXXXXX 314
           VCRSNL   P+          P S +D E    A V ++P+P      QVA+A       
Sbjct: 163 VCRSNLTPQPVDPPTQTTESLPDSSSDLEAQNEAVVELEPQPEVCENAQVAVA------- 215

Query: 313 XXXXXXXRIGSQRRAAAMTARSKSMPRVQRFPRSHSTGHSILARPGENLDRFTLRLPEYL 134
                   +   +       R     R  +FPRSHSTGHS++ +PGEN DRFTLRLP  +
Sbjct: 216 ---PEPEVMSVNQTLNRNRTRGSRSGRPSKFPRSHSTGHSLI-QPGENTDRFTLRLPVEV 271

Query: 133 KREIVDSAVEAAGRLQRTKSLVVF 62
           +++I++        L RT S+VVF
Sbjct: 272 RKQIMNR------ELNRTMSMVVF 289


>dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score =  236 bits (603), Expect = 3e-60
 Identities = 143/273 (52%), Positives = 166/273 (60%), Gaps = 25/273 (9%)
 Frame = -1

Query: 805 SMAIIIVVLISAFFFLGFFSIYIRQCXXXXXXXXXG----TLGGRSRRGVAQRGLDPEVL 638
           SMAI+IVVLI+AFFFLGFFS+Y+R C                  RSRR   QRGLDP VL
Sbjct: 56  SMAIVIVVLIAAFFFLGFFSVYVRHCYGDNTYAATTLPIGAAAARSRR--QQRGLDPAVL 113

Query: 637 ETFPTLAYSEVKNLKIGKGTLECAVCLSEFEEDETLRLLPKCSHVFHPDCIDAWLVSHVT 458
           ETFPT+AY++VK  K  KG LECAVC+SEF++D+TLRLLPKCSHVFHPDCID WL SHVT
Sbjct: 114 ETFPTMAYADVKEHKAVKGALECAVCISEFDDDDTLRLLPKCSHVFHPDCIDTWLASHVT 173

Query: 457 CPVCRSNL----------AADPIPASGTD-----------GEDCLAAAVVVDPEPLDQVA 341
           CPVCR+NL          A D  PA  +             E   A AVV+D E  +   
Sbjct: 174 CPVCRANLVPGDDADAPAAGDAAPAEPSSVHPAPQPQEPASETEAAHAVVIDVEESEDER 233

Query: 340 IAMXXXXXXXXXXXXXRIGSQRRAAAMTARSKSMPRVQRFPRSHSTGHSILARPGENLDR 161
           I               RIGS +RA     RSKS     RFPRSHSTGHS+ AR G   +R
Sbjct: 234 I------IREETDELTRIGSLKRA----LRSKSSRGPARFPRSHSTGHSLAARAGTGAER 283

Query: 160 FTLRLPEYLKREIVDSAVEAAGRLQRTKSLVVF 62
           FTLRLPE + RE+V     AAG+L+RT+SLV F
Sbjct: 284 FTLRLPESVLREVV-----AAGKLRRTQSLVAF 311


>ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea mays]
           gi|194707124|gb|ACF87646.1| unknown [Zea mays]
           gi|414589721|tpg|DAA40292.1| TPA: putative RING zinc
           finger domain superfamily protein [Zea mays]
          Length = 393

 Score =  235 bits (600), Expect = 7e-60
 Identities = 142/277 (51%), Positives = 168/277 (60%), Gaps = 29/277 (10%)
 Frame = -1

Query: 805 SMAIIIVVLISAFFFLGFFSIYIRQCXXXXXXXXXGTL----GGRSRRGVAQRGLDPEVL 638
           SMAI+IVVLI+AFFFLGFFSIY+R C                GG + R   QRGLD  VL
Sbjct: 53  SMAIVIVVLIAAFFFLGFFSIYVRHCYGDGSSGYSANRPPAPGGAAARSRRQRGLDEAVL 112

Query: 637 ETFPTLAYSEVKNLKIGKGTLECAVCLSEFEEDETLRLLPKCSHVFHPDCIDAWLVSHVT 458
           E+FPT+AY++VK  K GKG LECAVCLSEF++DETLRLLPKCSHVFHPDCID WL SHVT
Sbjct: 113 ESFPTMAYADVKAHKAGKGALECAVCLSEFDDDETLRLLPKCSHVFHPDCIDTWLASHVT 172

Query: 457 CPVCRSNLAAD-----PIPASGTDGEDCL------------AAAVVVDPEPLDQVAIAMX 329
           CPVCR+NL  D     P P +  D  + L            AAAVV+D +  ++  I   
Sbjct: 173 CPVCRANLVPDANAPPPPPPADDDAPELLPPPPVSAPPAAAAAAVVIDVDETEEERI--- 229

Query: 328 XXXXXXXXXXXXRIGSQRRAAAMTARSKSMPRVQRFPRSHSTGHSILAR--------PGE 173
                       RIGS +RA     RSKS     RFPRSHSTGHS+ A          G 
Sbjct: 230 ---IREEANELVRIGSVKRA----LRSKSGRAPARFPRSHSTGHSLAASATTGTGAGAGA 282

Query: 172 NLDRFTLRLPEYLKREIVDSAVEAAGRLQRTKSLVVF 62
           + +RFTLRLPE++ R++      AAG+LQRT SLV F
Sbjct: 283 STERFTLRLPEHVLRDLA-----AAGKLQRTTSLVAF 314


>ref|XP_003578264.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Brachypodium
           distachyon]
          Length = 399

 Score =  234 bits (596), Expect = 2e-59
 Identities = 144/272 (52%), Positives = 168/272 (61%), Gaps = 23/272 (8%)
 Frame = -1

Query: 805 SMAIIIVVLISAFFFLGFFSIYIRQCXXXXXXXXXGTL--GGRSRRGVAQRGLDPEVLET 632
           SMAI+IVVLI+AFFFLGFFS+YIR C           L  G  +R    QRGLD  VLET
Sbjct: 50  SMAIVIVVLIAAFFFLGFFSVYIRHCYGDRSGYSVNPLPAGNAARSRRQQRGLDKAVLET 109

Query: 631 FPTLAYSEVKNLKIGKGTLECAVCLSEFEEDETLRLLPKCSHVFHPDCIDAWLVSHVTCP 452
           FPT+AY++VK  K  KG LECAVCLSEF++DETLRLLPKCSHVFHPDCID WL SHVTCP
Sbjct: 110 FPTMAYADVKEHKSVKGALECAVCLSEFDDDETLRLLPKCSHVFHPDCIDTWLASHVTCP 169

Query: 451 VCRSNL-AADPIPASGTDGEDC------LAAAVVVDPEPLDQVAIAM----------XXX 323
           VCR+ L   D  PA+   G+D       L+A  V  P P +  A A+             
Sbjct: 170 VCRAVLDVPDDDPAAAPAGDDVSVEAAELSAPPVPAPPPQESPAAAVVIDVAEEETEEER 229

Query: 322 XXXXXXXXXXRIGSQRRAAAMTARSKSMPRVQRFPRSHSTGHSILA----RPGENLDRFT 155
                     RIGS +RA     RSKS  R   FPRSHSTGHS+ A    R G   +RFT
Sbjct: 230 IIREETDELTRIGSLKRA----LRSKSSRRAP-FPRSHSTGHSLAAAGGTRAGTGAERFT 284

Query: 154 LRLPEYLKREIVDSAVEAAGRLQRTKSLVVFP 59
           LRLPE++ +E+V     AAG+L+RTKSLV FP
Sbjct: 285 LRLPEHVLKEVV-----AAGKLRRTKSLVAFP 311


>tpg|DAA61870.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 404

 Score =  227 bits (579), Expect = 2e-57
 Identities = 140/275 (50%), Positives = 166/275 (60%), Gaps = 27/275 (9%)
 Frame = -1

Query: 805 SMAIIIVVLISAFFFLGFFSIYIRQCXXXXXXXXXGT-----LGGRSRRGVAQRGLDPEV 641
           SMAI+IVVLI+AFFFLGFFS+Y+R C          +        RSRR   QRGLD  V
Sbjct: 49  SMAIVIVVLIAAFFFLGFFSVYVRHCYGDGSSGYSASPAPGGAAARSRR--QQRGLDSAV 106

Query: 640 LETFPTLAYSEVKNLKIGKGTLECAVCLSEFEEDETLRLLPKCSHVFHPDCIDAWLVSHV 461
           LE+FPT+AY++VK  K GKG LECAVCLSEF++DETLRLLPKCSHVFHPDCID WL SHV
Sbjct: 107 LESFPTMAYADVKAHKAGKGALECAVCLSEFDDDETLRLLPKCSHVFHPDCIDTWLASHV 166

Query: 460 TCPVCRSNLAADP---IPASGTDGEDCL-----------------AAAVVVDPEPLDQVA 341
           TCPVCR+NLA  P    P    D  + L                 +AAVV+D E  ++  
Sbjct: 167 TCPVCRTNLALGPDANAPPPDDDTPELLPAPEAQELPSPTSAPPPSAAVVIDVEETEEER 226

Query: 340 IAMXXXXXXXXXXXXXRIGSQRRAAAMTARSKSMPRVQRFPRSHSTGHSILAR--PGENL 167
           I               RIGS +RA     RSKS     RFPRSHSTGHS+ A        
Sbjct: 227 I------IRAEADELMRIGSVKRA----LRSKSGRAPARFPRSHSTGHSLAASACATTGT 276

Query: 166 DRFTLRLPEYLKREIVDSAVEAAGRLQRTKSLVVF 62
           +RFTLRLP+++ R++      AAG+LQRT SLV F
Sbjct: 277 ERFTLRLPDHVLRDLT-----AAGKLQRTTSLVAF 306