BLASTX nr result

ID: Dioscorea21_contig00011233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011233
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE54721.1| hypothetical protein OsJ_02059 [Oryza sativa Japo...    70   2e-10
gb|AFW57928.1| hypothetical protein ZEAMMB73_373125 [Zea mays]         70   2e-10
gb|ACN31579.1| unknown [Zea mays] gi|413917995|gb|AFW57927.1| hy...    70   2e-10
ref|NP_001131401.1| uncharacterized protein LOC100192729 [Zea ma...    70   2e-10
ref|XP_002460429.1| hypothetical protein SORBIDRAFT_02g027970 [S...    67   2e-09

>gb|EEE54721.1| hypothetical protein OsJ_02059 [Oryza sativa Japonica Group]
          Length = 306

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
 Frame = +3

Query: 120 TGWFSGPMSRLLGLRVKIRFLSICPKNEAADLLRSANELFDRIKKQEALSRIR--KPEKE 293
           TGWF  PM + L L++ IR  S+CP  +A + LR+A EL +R KKQEAL R +  K  KE
Sbjct: 137 TGWFCKPMIKTLRLQLSIRLFSLCPNEDAKNFLRNAYELIERSKKQEALCRSQQLKENKE 196

Query: 294 LHDANRDSCDSAGVPSPESNDFGYENEDQEE 386
             D +  + D AG  + +S D   + E+ +E
Sbjct: 197 ASDRHNGTEDQAGGNNSDSEDAEDDEEEDKE 227


>gb|AFW57928.1| hypothetical protein ZEAMMB73_373125 [Zea mays]
          Length = 493

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
 Frame = +3

Query: 114 RGTGWFSGPMSRLLGLRVKIRFLSICPKNEAADLLRSANELFDRIKKQEALSRIRKPEKE 293
           R TGWFS PM + L L+V IR LS+    EA +LLR+A+EL +R KKQEALSR  +   E
Sbjct: 383 RSTGWFSKPMIKTLRLQVSIRLLSLLHNEEAKNLLRNAHELIERSKKQEALSR-SELSIE 441

Query: 294 LHDANRDSC------DSAGVPSPESNDFGYENEDQE 383
            +DA++ S       D  G  + +S D   E E++E
Sbjct: 442 YNDADQVSAAHTGTEDQVGPNNSDSEDVDDEEEEEE 477


>gb|ACN31579.1| unknown [Zea mays] gi|413917995|gb|AFW57927.1| hypothetical protein
           ZEAMMB73_373125 [Zea mays]
          Length = 557

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
 Frame = +3

Query: 114 RGTGWFSGPMSRLLGLRVKIRFLSICPKNEAADLLRSANELFDRIKKQEALSRIRKPEKE 293
           R TGWFS PM + L L+V IR LS+    EA +LLR+A+EL +R KKQEALSR  +   E
Sbjct: 385 RSTGWFSKPMIKTLRLQVSIRLLSLLHNEEAKNLLRNAHELIERSKKQEALSR-SELSIE 443

Query: 294 LHDANRDSC------DSAGVPSPESNDFGYENEDQE 383
            +DA++ S       D  G  + +S D   E E++E
Sbjct: 444 YNDADQVSAAHTGTEDQVGPNNSDSEDVDDEEEEEE 479


>ref|NP_001131401.1| uncharacterized protein LOC100192729 [Zea mays]
           gi|194691426|gb|ACF79797.1| unknown [Zea mays]
           gi|413917997|gb|AFW57929.1| hypothetical protein
           ZEAMMB73_373125 [Zea mays]
          Length = 555

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
 Frame = +3

Query: 114 RGTGWFSGPMSRLLGLRVKIRFLSICPKNEAADLLRSANELFDRIKKQEALSRIRKPEKE 293
           R TGWFS PM + L L+V IR LS+    EA +LLR+A+EL +R KKQEALSR  +   E
Sbjct: 383 RSTGWFSKPMIKTLRLQVSIRLLSLLHNEEAKNLLRNAHELIERSKKQEALSR-SELSIE 441

Query: 294 LHDANRDSC------DSAGVPSPESNDFGYENEDQE 383
            +DA++ S       D  G  + +S D   E E++E
Sbjct: 442 YNDADQVSAAHTGTEDQVGPNNSDSEDVDDEEEEEE 477


>ref|XP_002460429.1| hypothetical protein SORBIDRAFT_02g027970 [Sorghum bicolor]
           gi|241923806|gb|EER96950.1| hypothetical protein
           SORBIDRAFT_02g027970 [Sorghum bicolor]
          Length = 555

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
 Frame = +3

Query: 120 TGWFSGPMSRLLGLRVKIRFLSICPKNEAADLLRSANELFDRIKKQEALSRIRKPEKELH 299
           TGWFS PM + L L+V IR LS+    EA +LLR+A+EL +R KKQEALSR  +  KE +
Sbjct: 385 TGWFSKPMIKTLRLQVSIRLLSLLHNEEAKNLLRNAHELIERSKKQEALSR-SEWSKEDN 443

Query: 300 DANR------DSCDSAGVPSPESNDFGYENEDQE 383
           DA+        + D  G  + +S D   E E++E
Sbjct: 444 DADEVPATQTGTEDQVGPHNSDSEDVDDEEEEEE 477


Top