BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011210
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_563924.1| nuclear matrix constituent protein-like protein...    61   1e-07
dbj|BAF00573.1| putative nuclear matrix constituent protein [Ara...    61   1e-07
ref|XP_002525969.1| DNA double-strand break repair rad50 ATPase,...    60   1e-07
ref|XP_004147138.1| PREDICTED: putative nuclear matrix constitue...    60   2e-07
ref|XP_002278531.2| PREDICTED: putative nuclear matrix constitue...    59   3e-07

>ref|NP_563924.1| nuclear matrix constituent protein-like protein [Arabidopsis
           thaliana] gi|4850405|gb|AAD31075.1|AC007357_24 Similar
           to gb|D64087 nuclear matrix constituent protein 1
           (NMCP1) from Daucus carota [Arabidopsis thaliana]
           gi|332190866|gb|AEE28987.1| nuclear matrix constituent
           protein-like protein [Arabidopsis thaliana]
          Length = 1128

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/69 (42%), Positives = 45/69 (65%)
 Frame = -3

Query: 209 EERDQHXXXXXXXKDEIEDCGLMKKSLEKQIEDLRSEKERFESEWEVLDEKRSALNAELN 30
           EER+++       K +IE   + ++ L K++E+L+ EKERFE EWE+LDEK++  N E  
Sbjct: 514 EEREEYLRLQSELKSQIEKSRVHEEFLSKEVENLKQEKERFEKEWEILDEKQAVYNKERI 573

Query: 29  PYIDEREKF 3
              +E+EKF
Sbjct: 574 RISEEKEKF 582


>dbj|BAF00573.1| putative nuclear matrix constituent protein [Arabidopsis thaliana]
          Length = 743

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/69 (42%), Positives = 45/69 (65%)
 Frame = -3

Query: 209 EERDQHXXXXXXXKDEIEDCGLMKKSLEKQIEDLRSEKERFESEWEVLDEKRSALNAELN 30
           EER+++       K +IE   + ++ L K++E+L+ EKERFE EWE+LDEK++  N E  
Sbjct: 129 EEREEYLRLQSELKSQIEKSRVHEEFLSKEVENLKQEKERFEKEWEILDEKQAVYNKERI 188

Query: 29  PYIDEREKF 3
              +E+EKF
Sbjct: 189 RISEEKEKF 197


>ref|XP_002525969.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus
           communis] gi|223534701|gb|EEF36393.1| DNA double-strand
           break repair rad50 ATPase, putative [Ricinus communis]
          Length = 1163

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = -3

Query: 209 EERDQHXXXXXXXKDEIEDCGLMKKSLEKQIEDLRSEKERFESEWEVLDEKRSALNAELN 30
           EER ++       K+EIE C L ++   K++EDL+ +KE FE EW+ LDEKR  +  +L 
Sbjct: 499 EERVEYVRLQSELKEEIEKCRLQEQLFLKEVEDLKQQKENFEREWDDLDEKRVEIEKQLK 558

Query: 29  PYIDEREKF 3
              ++REKF
Sbjct: 559 SISEQREKF 567


>ref|XP_004147138.1| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Cucumis sativus]
          Length = 1169

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/68 (41%), Positives = 42/68 (61%)
 Frame = -3

Query: 209 EERDQHXXXXXXXKDEIEDCGLMKKSLEKQIEDLRSEKERFESEWEVLDEKRSALNAELN 30
           EER +H         EIE   L  K + K+ EDL+ E+ +FE +WE LDEKR+ ++ EL+
Sbjct: 519 EERSEHVRLECQLMQEIESYRLQNKIVMKEHEDLKQERVKFERDWEALDEKRTEIHDELS 578

Query: 29  PYIDEREK 6
             ++ER+K
Sbjct: 579 DLVEERKK 586


>ref|XP_002278531.2| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Vitis vinifera]
          Length = 1213

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/68 (41%), Positives = 41/68 (60%)
 Frame = -3

Query: 209 EERDQHXXXXXXXKDEIEDCGLMKKSLEKQIEDLRSEKERFESEWEVLDEKRSALNAELN 30
           EER +H       K EI+ C   ++ L+K+ EDL+ E+  FE +WE LDEKR+ +  E+ 
Sbjct: 521 EERSEHHRLQLELKQEIDKCRHQEEMLQKEREDLKQERIMFEKDWEALDEKRAVITKEMR 580

Query: 29  PYIDEREK 6
              DE+EK
Sbjct: 581 EIGDEKEK 588