BLASTX nr result

ID: Dioscorea21_contig00011173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011173
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002444436.1| hypothetical protein SORBIDRAFT_07g021910 [S...   101   7e-20
gb|ACG31172.1| RING-H2 finger protein ATL2C [Zea mays]                100   1e-19
ref|NP_001140996.1| uncharacterized protein LOC100273075 [Zea ma...   100   1e-19
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...   100   2e-19
ref|NP_001061924.1| Os08g0445000 [Oryza sativa Japonica Group] g...    96   2e-18

>ref|XP_002444436.1| hypothetical protein SORBIDRAFT_07g021910 [Sorghum bicolor]
           gi|241940786|gb|EES13931.1| hypothetical protein
           SORBIDRAFT_07g021910 [Sorghum bicolor]
          Length = 500

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/101 (52%), Positives = 67/101 (66%)
 Frame = -1

Query: 306 DQRRCFSMGSFEYVMDESSLLQVSIKLSKKKPAAIQKPGHRGAMSECDCHSRREGFSKAF 127
           D RRCFSMG++EYVMDESSLL+V++K  +KK  A + PGHR AMSECDCHS+REGF + F
Sbjct: 296 DVRRCFSMGTYEYVMDESSLLRVAVKPPEKKRPATRMPGHRVAMSECDCHSKREGF-RGF 354

Query: 126 DHSSRSFESIQXXXXXXXXXXXXXXNLQKKESFSISKIWLR 4
           D   +  +                  + K+ESFSISKIW+R
Sbjct: 355 DAPPKQQQQ-----------PSSKAAVDKRESFSISKIWMR 384


>gb|ACG31172.1| RING-H2 finger protein ATL2C [Zea mays]
          Length = 481

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/103 (51%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = -1

Query: 306 DQRRCFSMGSFEYVMDESSLLQVSIKLSKKKPAAIQK--PGHRGAMSECDCHSRREGFSK 133
           D RRCFSMG++EYVMDESSLL+V++KL +KK  A +   PGHR AMSECDCHS+REGF +
Sbjct: 289 DVRRCFSMGTYEYVMDESSLLRVAVKLPEKKRPATRSRMPGHRVAMSECDCHSKREGF-R 347

Query: 132 AFDHSSRSFESIQXXXXXXXXXXXXXXNLQKKESFSISKIWLR 4
            FD   +  + +                + K+ESFS+SKIW+R
Sbjct: 348 GFDAPPKQQQQLS------------KAAVDKRESFSVSKIWMR 378


>ref|NP_001140996.1| uncharacterized protein LOC100273075 [Zea mays]
           gi|194702090|gb|ACF85129.1| unknown [Zea mays]
          Length = 483

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/103 (51%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = -1

Query: 306 DQRRCFSMGSFEYVMDESSLLQVSIKLSKKKPAAIQK--PGHRGAMSECDCHSRREGFSK 133
           D RRCFSMG++EYVMDESSLL+V++KL +KK  A +   PGHR AMSECDCHS+REGF +
Sbjct: 291 DVRRCFSMGTYEYVMDESSLLRVAVKLPEKKRPATRSRMPGHRVAMSECDCHSKREGF-R 349

Query: 132 AFDHSSRSFESIQXXXXXXXXXXXXXXNLQKKESFSISKIWLR 4
            FD   +  + +                + K+ESFS+SKIW+R
Sbjct: 350 GFDAPPKQQQQLS------------KAAVDKRESFSVSKIWMR 380


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 58/111 (52%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
 Frame = -1

Query: 321 TNRNLDQRRCFSMGSFEYVMDESSLLQVSI-----KLSKKKPAAIQKPGHRGAMSECDCH 157
           +N N+D+RRCFSMGSFEYVMD+++ LQV+I     K S KKP+    PGHR AMSECDC 
Sbjct: 285 SNSNVDERRCFSMGSFEYVMDDNTSLQVAIRTPMKKQSSKKPSIPLTPGHRPAMSECDCE 344

Query: 156 SRREGFSKAFDHSSRSFESIQXXXXXXXXXXXXXXNLQKKESFSISKIWLR 4
           SRRE F+  F+   RS E+                   K+ESFSISKIWLR
Sbjct: 345 SRRE-FNGLFE-GIRSMEANGNVSGVVTKSIGNSIGRSKRESFSISKIWLR 393


>ref|NP_001061924.1| Os08g0445000 [Oryza sativa Japonica Group]
           gi|42407444|dbj|BAD10051.1| putative RING finger 1
           [Oryza sativa Japonica Group]
           gi|42408331|dbj|BAD09484.1| putative RING finger 1
           [Oryza sativa Japonica Group]
           gi|113623893|dbj|BAF23838.1| Os08g0445000 [Oryza sativa
           Japonica Group] gi|125603581|gb|EAZ42906.1| hypothetical
           protein OsJ_27500 [Oryza sativa Japonica Group]
           gi|215741364|dbj|BAG97859.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 501

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/105 (47%), Positives = 62/105 (59%)
 Frame = -1

Query: 318 NRNLDQRRCFSMGSFEYVMDESSLLQVSIKLSKKKPAAIQKPGHRGAMSECDCHSRREGF 139
           N   D RRC+SMG++EYVMDE SLL+V++K   KK    Q PGHR AMSECDCHS+RE F
Sbjct: 291 NPEQDVRRCYSMGTYEYVMDERSLLRVAVKPPAKKRPTTQMPGHRVAMSECDCHSKRESF 350

Query: 138 SKAFDHSSRSFESIQXXXXXXXXXXXXXXNLQKKESFSISKIWLR 4
                   R  +++                + KKESFS SKIW+R
Sbjct: 351 --------RGLDALPGGKLAQAQPPKPPAKVGKKESFSFSKIWMR 387


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