BLASTX nr result

ID: Dioscorea21_contig00011163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011163
         (1449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group] g...   465   e-128
ref|XP_002467904.1| hypothetical protein SORBIDRAFT_01g036150 [S...   441   e-121
ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|2...   441   e-121
ref|XP_003557966.1| PREDICTED: pentatricopeptide repeat-containi...   440   e-121
gb|ACL53015.1| unknown [Zea mays] gi|414866677|tpg|DAA45234.1| T...   436   e-120

>ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group]
            gi|108708021|gb|ABF95816.1| expressed protein [Oryza
            sativa Japonica Group] gi|113548508|dbj|BAF11951.1|
            Os03g0336000 [Oryza sativa Japonica Group]
            gi|125543773|gb|EAY89912.1| hypothetical protein
            OsI_11461 [Oryza sativa Indica Group]
            gi|215712300|dbj|BAG94427.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 545

 Score =  465 bits (1197), Expect = e-128
 Identities = 235/434 (54%), Positives = 308/434 (70%), Gaps = 2/434 (0%)
 Frame = +3

Query: 99   DVENSGRRSSRLHVGDLVKKVMSLPIEERVKVLDLLDCDYRDLTVSDYNDILTALVKARE 278
            D    GRR +R+   D  K++M LP+EERVKVLDLL  D   LTVSDYNDIL+AL  A +
Sbjct: 84   DGGGGGRRGTRIRARDCAKRIMGLPVEERVKVLDLLQRDDGALTVSDYNDILSALAMAGD 143

Query: 279  FDSAVNLFSELPSLGVSPDSWTYSVMIQCLCKKNEPDEAKRALDEMMERGFVPNVVTFTE 458
             DSAV LF  L   GV+PD+ +Y+  +QCLC+K  PDEAK ALDEM+ RGF P V TF+ 
Sbjct: 144  HDSAVALFRALRPNGVTPDAQSYATAVQCLCRKGAPDEAKEALDEMVARGFRPTVATFSA 203

Query: 459  LITCLCKRGRMTMSFEIFEIMRRIGCEPTVRTYNCLIQGLCYVGRVEEALELLHKIKKST 638
            ++ CLCKRGR+T + E+F+ MR +GCEPT+RTYN LI GLCYVGR+EEAL+LL+K+K+S 
Sbjct: 204  VVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLEEALDLLNKLKESP 263

Query: 639  KR-PDIYSFTLVIDGFCKVGRSDEARELFDEALEMGLVPNVVTYNSLIGGYCTEGRPLEG 815
            K+ PDIY+FT+V+DGFCKVGR+DEA  +F +A+  GL P + TYN+L+ G+C EG PL+ 
Sbjct: 264  KQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNALLNGHCKEGNPLKA 323

Query: 816  LRVLKEMEGR-SCPPDFISYNILLQGLLRFGEISAAFETYMKMHNAGFQASERVMNTLLR 992
              +L EM G  +CPPD IS++I+LQ LLR GE SAA++ Y +M  AGF+A  R ++TL R
Sbjct: 324  YSLLMEMCGNAACPPDRISFSIVLQALLRAGETSAAWQAYKRMERAGFEADGRALDTLAR 383

Query: 993  GLCRKSTRNDEPLKEAKELFEQIMELGYPLSPYTYCLMVQALAEKGEVSQAFNHLLEMIG 1172
            GLCR+   N   L +A+E+F +++  G+    YTYCLM QALA  GEV  A + L EM  
Sbjct: 384  GLCRQCAANVAALADAREVFGKLVASGHEPVSYTYCLMAQALARGGEVDAAVSLLGEMAR 443

Query: 1173 KGYSPRMLTYNVVLRVLCMDGRVDDAMYAFILMLEKDTIPGKFSFSVLIGELERQGRLLD 1352
            +GY+ R   Y  V+R LC  GR  DA+    L++ +D +PG+ +F  L+GEL RQGR  D
Sbjct: 444  RGYALRKRAYTDVVRALCERGRARDALRVLALVIARDFVPGRNAFDALLGELARQGRWPD 503

Query: 1353 AYGVYAAAVKWGVV 1394
            A  VYAAAVK GV+
Sbjct: 504  AMAVYAAAVKRGVL 517


>ref|XP_002467904.1| hypothetical protein SORBIDRAFT_01g036150 [Sorghum bicolor]
            gi|241921758|gb|EER94902.1| hypothetical protein
            SORBIDRAFT_01g036150 [Sorghum bicolor]
          Length = 558

 Score =  441 bits (1135), Expect = e-121
 Identities = 223/428 (52%), Positives = 302/428 (70%), Gaps = 3/428 (0%)
 Frame = +3

Query: 120  RSSRLHVGDLVKKVMSLPIEERVKVLDLLDCDYRDLTVSDYNDILTALVKAREFDSAVNL 299
            + SR    D  K++M LP+EERVKVLDLL  D   LTVSDYNDIL+AL +A +  +AV L
Sbjct: 109  KRSRFCARDCAKRIMELPVEERVKVLDLLPRDDDALTVSDYNDILSALARAGDHATAVAL 168

Query: 300  FSELPSLGVSPDSWTYSVMIQCLCKKNEPDEAKRALDEMMERGFVPNVVTFTELITCLCK 479
            F  +P   V+PD+ +++  +QCLC++  PDEAK A+DEM+ RGF P+V TF+ ++ CLCK
Sbjct: 169  FRAMP---VAPDAQSFATAVQCLCRQGAPDEAKLAIDEMVARGFRPSVATFSAVVGCLCK 225

Query: 480  RGRMTMSFEIFEIMRRIGCEPTVRTYNCLIQGLCYVGRVEEALELLHKIKKSTKRPDIYS 659
            RGR+T + E+F+ MR +GCEPT+R+YN L+ GLCYVGR+EEAL+LL+K+K S   PDIY+
Sbjct: 226  RGRVTKAMEVFDAMRALGCEPTIRSYNSLVGGLCYVGRLEEALDLLNKLKDSPMTPDIYT 285

Query: 660  FTLVIDGFCKVGRSDEARELFDEALEMGLVPNVVTYNSLIGGYCTEGRPLEGLRVLKEME 839
            FT+V+DGFCKVGR++EA  +F +A+ MGL P + TYN+L+ G+C EG PL+   +L EM 
Sbjct: 286  FTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTIFTYNALLNGHCKEGNPLKAFALLMEMC 345

Query: 840  GR--SCPPDFISYNILLQGLLRFGEISAAFETYMKMHNAGFQASERVMNTLLRGLCRKST 1013
            G   +CPPD IS+ I+L  LLR GE SAA++TY +M  AGF+   R ++TL+RGL R+  
Sbjct: 346  GNDAACPPDKISFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLVRGLFRRCA 405

Query: 1014 RNDEPLKEAKELFEQIMELGYPLSPYTYCLMVQALAEKGEVSQAFNHLLEMIGKGYSPRM 1193
             +   L +AKE+F +++  G+    YTYCLM QALA  GEV  A   L +M+ KGY+ R 
Sbjct: 406  TDVSALGDAKEVFAKVVASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRKGYALRK 465

Query: 1194 LTYNVVLRVLCMDGRVDDAMYAFIL-MLEKDTIPGKFSFSVLIGELERQGRLLDAYGVYA 1370
              Y  V+R LC  GR  DA+   +L M+ +D +PG+ +F  L+GEL RQGR  DA  VYA
Sbjct: 466  RAYTDVVRALCDRGRALDALQVLVLVMIVRDFVPGRNAFEALLGELSRQGRWADAMAVYA 525

Query: 1371 AAVKWGVV 1394
            AAVK GVV
Sbjct: 526  AAVKRGVV 533



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 43/176 (24%), Positives = 84/176 (47%)
 Frame = +3

Query: 870  YNILLQGLLRFGEISAAFETYMKMHNAGFQASERVMNTLLRGLCRKSTRNDEPLKEAKEL 1049
            YN +L  L R G+ + A   +  M  A    S     T ++ LCR+   +     EAK  
Sbjct: 149  YNDILSALARAGDHATAVALFRAMPVAPDAQS---FATAVQCLCRQGAPD-----EAKLA 200

Query: 1050 FEQIMELGYPLSPYTYCLMVQALAEKGEVSQAFNHLLEMIGKGYSPRMLTYNVVLRVLCM 1229
             ++++  G+  S  T+  +V  L ++G V++A      M   G  P + +YN ++  LC 
Sbjct: 201  IDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVFDAMRALGCEPTIRSYNSLVGGLCY 260

Query: 1230 DGRVDDAMYAFILMLEKDTIPGKFSFSVLIGELERQGRLLDAYGVYAAAVKWGVVP 1397
             GR+++A+     + +    P  ++F++++    + GR  +A  ++  A+  G+ P
Sbjct: 261  VGRLEEALDLLNKLKDSPMTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSP 316


>ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|222868300|gb|EEF05431.1|
            predicted protein [Populus trichocarpa]
          Length = 535

 Score =  441 bits (1135), Expect = e-121
 Identities = 212/431 (49%), Positives = 305/431 (70%), Gaps = 1/431 (0%)
 Frame = +3

Query: 120  RSSRLHVGDLVKKVMSLPIEERVK-VLDLLDCDYRDLTVSDYNDILTALVKAREFDSAVN 296
            ++S+  V DL+  V +LP +ERV  ++ +LD +     +SD+ND+L ALV A E D  + 
Sbjct: 103  KASKFQVLDLLNAVKALPCKERVDYIVRVLDKEIGFFNISDFNDVLMALVTANESDLVLK 162

Query: 297  LFSELPSLGVSPDSWTYSVMIQCLCKKNEPDEAKRALDEMMERGFVPNVVTFTELITCLC 476
            L+S L    + P+SWT+S+M++C CKK +P EAKR LD+MM++GF PNV T T LI   C
Sbjct: 163  LYSGLSCYSLEPNSWTFSIMVRCHCKKKDPGEAKRVLDQMMQKGFNPNVATLTILINSFC 222

Query: 477  KRGRMTMSFEIFEIMRRIGCEPTVRTYNCLIQGLCYVGRVEEALELLHKIKKSTKRPDIY 656
            K G++  +F++FE+M RIGC+P ++TYNCL++G+CYVGR++EA EL+  IKK+T  PDIY
Sbjct: 223  KMGQLQNTFQVFEVMDRIGCKPNIQTYNCLLKGMCYVGRIDEAFELMEDIKKTTVEPDIY 282

Query: 657  SFTLVIDGFCKVGRSDEARELFDEALEMGLVPNVVTYNSLIGGYCTEGRPLEGLRVLKEM 836
            ++T ++DGFCKVGRSDEA EL +EA+EMGL PNVVT+N+L+ GY  EGRPL+G  VLK M
Sbjct: 283  TYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTLLDGYAKEGRPLKGFGVLKLM 342

Query: 837  EGRSCPPDFISYNILLQGLLRFGEISAAFETYMKMHNAGFQASERVMNTLLRGLCRKSTR 1016
            + R C PD+ISY+ LL GLL +G++ A    + +M  +G +A ER+MN+L+RGLCRKS +
Sbjct: 343  KQRKCMPDYISYSTLLHGLLLWGKVLAGLRIFNEMEGSGLEADERLMNSLVRGLCRKSIK 402

Query: 1017 NDEPLKEAKELFEQIMELGYPLSPYTYCLMVQALAEKGEVSQAFNHLLEMIGKGYSPRML 1196
             ++ ++ A E+FE++ + G+ +   TY L++QAL    +V  AF +L +M+  GY PR++
Sbjct: 403  ENDLVEVAYEVFEKMKKRGFVIEQSTYALVIQALWVAKKVDDAFINLHQMVRLGYIPRLI 462

Query: 1197 TYNVVLRVLCMDGRVDDAMYAFILMLEKDTIPGKFSFSVLIGELERQGRLLDAYGVYAAA 1376
            T N V++ LC+ G+VD A Y  +LM E   IP + S+ +LI EL RQ R L A  VY AA
Sbjct: 463  TINNVIQALCVGGKVDKAFYVLVLMYENSKIPSRMSYDLLIHELNRQERTLGACNVYGAA 522

Query: 1377 VKWGVVPKRIP 1409
            +  GVVP + P
Sbjct: 523  LVRGVVPHKKP 533


>ref|XP_003557966.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Brachypodium distachyon]
          Length = 538

 Score =  440 bits (1132), Expect = e-121
 Identities = 219/430 (50%), Positives = 306/430 (71%), Gaps = 3/430 (0%)
 Frame = +3

Query: 114  GRRSSRLHVGDLVKKVMSLPIEERVKVLDLLDCDYRDLTVSDYNDILTALVKAREFDSAV 293
            GRRSSRL   D  +++MSLP+EERVKVLDLL  D   LT+SDYNDIL+AL +  ++DSA+
Sbjct: 83   GRRSSRLRARDCARRIMSLPMEERVKVLDLLQRDDAALTISDYNDILSALARGGDYDSAM 142

Query: 294  NLFSEL-PSLGVSPDSWTYSVMIQCLCKKNEPDEAKRALDEMMERGFVPNVVTFTELITC 470
             LF  L P+  V+PD+ ++++ +QC C+K  PDEAK  LDEM+ RG++P V  F+ ++ C
Sbjct: 143  ALFRALEPNGTVAPDAHSFAIAVQCFCRKGAPDEAKETLDEMLARGYLPTVSAFSAVVGC 202

Query: 471  LCKRGRMTMSFEIFEIMRRIGCEPTVRTYNCLIQGLCYVGRVEEALELLHKIKKSTKRP- 647
            LCKRGR+T + E+ + MR +GCEPT+RTYN LI GLCYVGR+E+A +LL+K+K S K+  
Sbjct: 203  LCKRGRVTRAMEVLDAMRGVGCEPTIRTYNSLIGGLCYVGRLEDARDLLNKLKDSPKQTA 262

Query: 648  DIYSFTLVIDGFCKVGRSDEARELFDEALEMGLVPNVVTYNSLIGGYCTEGRPLEGLRVL 827
            DIY+FT+V+DGFCKVGR+D+A  +F++A+  GL P + TYN+L+ G+C EG  L+   +L
Sbjct: 263  DIYTFTIVLDGFCKVGRTDDAMAIFEDAVRTGLSPTIFTYNALLNGHCKEGHLLKAYNLL 322

Query: 828  KEM-EGRSCPPDFISYNILLQGLLRFGEISAAFETYMKMHNAGFQASERVMNTLLRGLCR 1004
             EM +  +CPPD IS++I+L  LLR GEISAA++T+ +M +AG +A  R ++TL RGLCR
Sbjct: 323  MEMCDNETCPPDKISFSIVLPALLRAGEISAAWQTFKRMEHAGLEADGRALDTLTRGLCR 382

Query: 1005 KSTRNDEPLKEAKELFEQIMELGYPLSPYTYCLMVQALAEKGEVSQAFNHLLEMIGKGYS 1184
            +   +   L++AKE+F +++  G+    YTYCLM QALA  GEV  A   L +M  KGY+
Sbjct: 383  QCAADISALRDAKEVFGKLVSSGHEPVSYTYCLMAQALARGGEVDAAVAILDDMARKGYA 442

Query: 1185 PRMLTYNVVLRVLCMDGRVDDAMYAFILMLEKDTIPGKFSFSVLIGELERQGRLLDAYGV 1364
             R   Y  V+R LC   R  +A+    +++ +D +PG+ +F  L+GEL RQGR  DA  V
Sbjct: 443  LRKRAYTDVVRALCDRSRTSEAVRVLAVVIARDFVPGRNAFDALLGELSRQGRWPDAMAV 502

Query: 1365 YAAAVKWGVV 1394
            YAAAVK GVV
Sbjct: 503  YAAAVKRGVV 512


>gb|ACL53015.1| unknown [Zea mays] gi|414866677|tpg|DAA45234.1| TPA: hypothetical
            protein ZEAMMB73_414823 [Zea mays]
          Length = 559

 Score =  436 bits (1121), Expect = e-120
 Identities = 223/431 (51%), Positives = 297/431 (68%), Gaps = 4/431 (0%)
 Frame = +3

Query: 114  GRRSSRLHVGDLVKKVMSLPIEERVKVLDLLDCDYRDLTVSDYNDILTALVKAREFDSAV 293
            G + SR    D  K++M LP+EERVKVLDLL  D   LTVSDYNDIL+AL +A +  +AV
Sbjct: 107  GSKRSRFCARDCAKRIMELPVEERVKVLDLLPRDDAALTVSDYNDILSALARAGDHATAV 166

Query: 294  NLFSELPSLGVSPDSWTYSVMIQCLCKKNEPDEAKRALDEMMERGFVPNVVTFTELITCL 473
             LF  +P   V+PD+ +++  +QCLC++  PDEAK ALDEM+ RGF P+V TF+ ++ CL
Sbjct: 167  ALFRAMP---VAPDAHSFATAVQCLCRQGAPDEAKLALDEMVARGFRPSVATFSAVVGCL 223

Query: 474  CKRGRMTMSFEIFEIMRRIGCEPTVRTYNCLIQGLCYVGRVEEALELLHKIKKSTKRPDI 653
            CKRGR+T + E+ + M  +GCEPT+RTYN L+ GLCYVGR+EEALELL K+K S   PDI
Sbjct: 224  CKRGRVTKAMEVLDAMCGLGCEPTIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDI 283

Query: 654  YSFTLVIDGFCKVGRSDEARELFDEALEMGLVPNVVTYNSLIGGYCTEGRPLEGLRVLKE 833
            Y+FT+V+DGFCKVGR++EA  +F +A+ MGL P   TYN+L+ G+C EG PL+   +L E
Sbjct: 284  YTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALLNGHCKEGNPLKAFALLME 343

Query: 834  MEGR---SCPPDFISYNILLQGLLRFGEISAAFETYMKMHNAGFQASERVMNTLLRGLCR 1004
            M G    +C PD  S+ I+L  LLR GE SAA++TY +M  AGF+   R ++TL RGLCR
Sbjct: 344  MCGNNDAACLPDKTSFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLARGLCR 403

Query: 1005 KSTRNDEPLKEAKELFEQIMELGYPLSPYTYCLMVQALAEKGEVSQAFNHLLEMIGKGYS 1184
            +   +   L +A+E+F +++  G+    YTYCLM QALA  GEV  A   L +M+ KGY+
Sbjct: 404  RCATDASALGDAEEVFAKVVASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRKGYA 463

Query: 1185 PRMLTYNVVLRVLCMDGRVDDAMYAFIL-MLEKDTIPGKFSFSVLIGELERQGRLLDAYG 1361
             R   Y  V+R LC  GR  DA+   +L M+ +D +PG+ +F  L+GEL RQGR  DA  
Sbjct: 464  LRKRAYTDVVRALCDRGRARDALQVLVLVMIVRDFVPGRNAFEALLGELSRQGRWADAMA 523

Query: 1362 VYAAAVKWGVV 1394
            VYAAAVK GVV
Sbjct: 524  VYAAAVKRGVV 534



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 46/176 (26%), Positives = 86/176 (48%)
 Frame = +3

Query: 870  YNILLQGLLRFGEISAAFETYMKMHNAGFQASERVMNTLLRGLCRKSTRNDEPLKEAKEL 1049
            YN +L  L R G+ + A   +  M  A    S     T ++ LCR+   +     EAK  
Sbjct: 149  YNDILSALARAGDHATAVALFRAMPVAPDAHS---FATAVQCLCRQGAPD-----EAKLA 200

Query: 1050 FEQIMELGYPLSPYTYCLMVQALAEKGEVSQAFNHLLEMIGKGYSPRMLTYNVVLRVLCM 1229
             ++++  G+  S  T+  +V  L ++G V++A   L  M G G  P + TYN ++  LC 
Sbjct: 201  LDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMCGLGCEPTIRTYNSLVGGLCY 260

Query: 1230 DGRVDDAMYAFILMLEKDTIPGKFSFSVLIGELERQGRLLDAYGVYAAAVKWGVVP 1397
             GR+++A+     + +    P  ++F++++    + GR  +A  ++  A+  G+ P
Sbjct: 261  VGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSP 316


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