BLASTX nr result

ID: Dioscorea21_contig00011126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011126
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guin...   100   2e-19
dbj|BAD10062.1| putative AT-hook DNA-binding protein [Oryza sati...    95   5e-18
dbj|BAD10063.1| putative AT-hook DNA-binding protein [Oryza sati...    95   5e-18
gb|EAZ43313.1| hypothetical protein OsJ_27909 [Oryza sativa Japo...    95   5e-18
ref|NP_001062218.1| Os08g0512400 [Oryza sativa Japonica Group] g...    95   5e-18

>gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guineensis]
          Length = 362

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 61/113 (53%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   SGGTVTYEGRFEIXXXXXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSP 180
           SGGTVTYEGRFEI              QRSRTGGLSVS                    SP
Sbjct: 221 SGGTVTYEGRFEILSLSGSFLLSESGGQRSRTGGLSVSLAGPDGRVLGGGVAGLLTAASP 280

Query: 181 VQVVVGSFIVDGRKEPKLRNYSNPASAPGKVTAGGMVA-PGSPLSRGTQSESS 336
           VQVVVGSFI DG+KEPK    S+P  APGK+ AGG  A   SP SRGT SESS
Sbjct: 281 VQVVVGSFIADGKKEPKHTAPSDPTLAPGKLAAGGAAAGANSPPSRGTLSESS 333


>dbj|BAD10062.1| putative AT-hook DNA-binding protein [Oryza sativa Japonica Group]
           gi|125562155|gb|EAZ07603.1| hypothetical protein
           OsI_29854 [Oryza sativa Indica Group]
          Length = 354

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 55/112 (49%), Positives = 61/112 (54%)
 Frame = +1

Query: 1   SGGTVTYEGRFEIXXXXXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSP 180
           SGGTVTYEGRFEI              QRSRTGGLSVS                    +P
Sbjct: 214 SGGTVTYEGRFEILSLSGSFLLTDHGGQRSRTGGLSVSLAGPDGRLLGGGVAGLLIAATP 273

Query: 181 VQVVVGSFIVDGRKEPKLRNYSNPASAPGKVTAGGMVAPGSPLSRGTQSESS 336
           VQ+VVGSF  +G+KEPK   +S PASAP K      + P SP SRGT SESS
Sbjct: 274 VQIVVGSFNSEGKKEPKQHAHSEPASAPSKAVPTAGMGPNSPPSRGTLSESS 325


>dbj|BAD10063.1| putative AT-hook DNA-binding protein [Oryza sativa Japonica Group]
          Length = 258

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 55/112 (49%), Positives = 61/112 (54%)
 Frame = +1

Query: 1   SGGTVTYEGRFEIXXXXXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSP 180
           SGGTVTYEGRFEI              QRSRTGGLSVS                    +P
Sbjct: 118 SGGTVTYEGRFEILSLSGSFLLTDHGGQRSRTGGLSVSLAGPDGRLLGGGVAGLLIAATP 177

Query: 181 VQVVVGSFIVDGRKEPKLRNYSNPASAPGKVTAGGMVAPGSPLSRGTQSESS 336
           VQ+VVGSF  +G+KEPK   +S PASAP K      + P SP SRGT SESS
Sbjct: 178 VQIVVGSFNSEGKKEPKQHAHSEPASAPSKAVPTAGMGPNSPPSRGTLSESS 229


>gb|EAZ43313.1| hypothetical protein OsJ_27909 [Oryza sativa Japonica Group]
          Length = 242

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 55/112 (49%), Positives = 61/112 (54%)
 Frame = +1

Query: 1   SGGTVTYEGRFEIXXXXXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSP 180
           SGGTVTYEGRFEI              QRSRTGGLSVS                    +P
Sbjct: 102 SGGTVTYEGRFEILSLSGSFLLTDHGGQRSRTGGLSVSLAGPDGRLLGGGVAGLLIAATP 161

Query: 181 VQVVVGSFIVDGRKEPKLRNYSNPASAPGKVTAGGMVAPGSPLSRGTQSESS 336
           VQ+VVGSF  +G+KEPK   +S PASAP K      + P SP SRGT SESS
Sbjct: 162 VQIVVGSFNSEGKKEPKQHAHSEPASAPSKAVPTAGMGPNSPPSRGTLSESS 213


>ref|NP_001062218.1| Os08g0512400 [Oryza sativa Japonica Group]
           gi|113624187|dbj|BAF24132.1| Os08g0512400, partial
           [Oryza sativa Japonica Group]
          Length = 292

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 55/112 (49%), Positives = 61/112 (54%)
 Frame = +1

Query: 1   SGGTVTYEGRFEIXXXXXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSP 180
           SGGTVTYEGRFEI              QRSRTGGLSVS                    +P
Sbjct: 152 SGGTVTYEGRFEILSLSGSFLLTDHGGQRSRTGGLSVSLAGPDGRLLGGGVAGLLIAATP 211

Query: 181 VQVVVGSFIVDGRKEPKLRNYSNPASAPGKVTAGGMVAPGSPLSRGTQSESS 336
           VQ+VVGSF  +G+KEPK   +S PASAP K      + P SP SRGT SESS
Sbjct: 212 VQIVVGSFNSEGKKEPKQHAHSEPASAPSKAVPTAGMGPNSPPSRGTLSESS 263


Top