BLASTX nr result

ID: Dioscorea21_contig00011118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011118
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19787.3| unnamed protein product [Vitis vinifera]              122   5e-26
ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250...   121   6e-26
ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|...   120   1e-25
ref|XP_004149998.1| PREDICTED: uncharacterized protein LOC101207...   112   4e-23
emb|CBI17425.3| unnamed protein product [Vitis vinifera]              111   8e-23

>emb|CBI19787.3| unnamed protein product [Vitis vinifera]
          Length = 289

 Score =  122 bits (305), Expect = 5e-26
 Identities = 80/173 (46%), Positives = 93/173 (53%)
 Frame = -3

Query: 541 WVPASKRREXXXXXXXXXXXXQPEPSKRPRELPIXXXXXXXXTSSGMEAISFPAEVSSPA 362
           WVPA+KRRE                 KR RE P+         +SG+E   FP+EV+SPA
Sbjct: 145 WVPAAKRREN---------------QKRQRENPVAPALATT--TSGLEVGHFPSEVNSPA 187

Query: 361 VFRCVRVSPMDEAEDEYAYQTAVNIGGHVFKGILYDQGPDSHLHHQHPGEXXXXXXXXXX 182
            FRCVRVS MDEA+++ AYQTAVNIGGHVFKGILYD GP+S    ++ GE          
Sbjct: 188 YFRCVRVSAMDEADEQLAYQTAVNIGGHVFKGILYDHGPES----RYGGE-----SSSGG 238

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXALLDPGSLYPAPLSAFMASTQFFPHHPRP 23
                                    LLDP SLYPAPL+ FMA TQFFP  PRP
Sbjct: 239 GSGSQQHNLITAPPGVTTTSNQATTLLDP-SLYPAPLNVFMAGTQFFP-PPRP 289


>ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250664 [Vitis vinifera]
          Length = 344

 Score =  121 bits (304), Expect = 6e-26
 Identities = 83/197 (42%), Positives = 94/197 (47%), Gaps = 24/197 (12%)
 Frame = -3

Query: 541 WVPASKRREXXXXXXXXXXXXQP-----------------EPSKRPRELP---IXXXXXX 422
           WVPA+KRRE            Q                  E  KR RE P          
Sbjct: 150 WVPAAKRRERQQHLTVIQQQQQQQQQQQHQQHQQQLQLRGENPKRQRENPSSSALACTRL 209

Query: 421 XXTSSGMEAISFPAEVSSPAVFRCVRVSPMDEAEDEYAYQTAVNIGGHVFKGILYDQGPD 242
              +SG+E  +FP+EV+SPAVFRCVRVS +DE +D+YAYQTAVNIGGHVFKGILYD GP+
Sbjct: 210 PTHTSGLEIANFPSEVNSPAVFRCVRVSSIDETDDQYAYQTAVNIGGHVFKGILYDHGPE 269

Query: 241 SHL----HHQHPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLDPGSLYPAP 74
            H          G                                   A LDP SLYPAP
Sbjct: 270 GHYGGGESSSAGGGGLQQLNLITGAAAAASTSTATAATTGSGSAGAAAAFLDP-SLYPAP 328

Query: 73  LSAFMASTQFFPHHPRP 23
           L+ FMA TQFFP HPRP
Sbjct: 329 LNTFMAGTQFFP-HPRP 344


>ref|XP_002327777.1| short internodes 2 [Populus trichocarpa]
           gi|222836862|gb|EEE75255.1| short internodes 2 [Populus
           trichocarpa]
          Length = 344

 Score =  120 bits (301), Expect = 1e-25
 Identities = 80/186 (43%), Positives = 95/186 (51%), Gaps = 17/186 (9%)
 Frame = -3

Query: 541 WVPASKRREXXXXXXXXXXXXQP------EPSKRPRELPIXXXXXXXXTS---SGMEAIS 389
           WVPASKRRE            Q       E  KR RE P          +   SG+E  +
Sbjct: 158 WVPASKRRERQHQLTIFQQQQQQQLQIRGENPKRQRENPSPSSLACTHLANNMSGLELGN 217

Query: 388 FPAEVSSPAVFRCVRVSPMDEAEDEYAYQTAVNIGGHVFKGILYDQGPDSHLHHQHPGE- 212
           FPAEVSSPA+FRCVRVS +DE+E+  AYQTAVNIGGHVFKG+LYD+GP+S  ++  PGE 
Sbjct: 218 FPAEVSSPALFRCVRVSGIDESEEMLAYQTAVNIGGHVFKGVLYDRGPES--NYLAPGET 275

Query: 211 -------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLDPGSLYPAPLSAFMAS 53
                                                    + LDP SLYPAPL+ FMA 
Sbjct: 276 SSGGGGGVQPLNLIAAGTATTSATISATGGGGGVTVASTTASFLDPSSLYPAPLNTFMAG 335

Query: 52  TQFFPH 35
           TQFFP+
Sbjct: 336 TQFFPN 341


>ref|XP_004149998.1| PREDICTED: uncharacterized protein LOC101207689 [Cucumis sativus]
           gi|449531384|ref|XP_004172666.1| PREDICTED:
           uncharacterized LOC101207689 [Cucumis sativus]
          Length = 331

 Score =  112 bits (280), Expect = 4e-23
 Identities = 62/125 (49%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
 Frame = -3

Query: 412 SSGMEAISFPAEVSSPAVFRCVRVSPMDEAEDEYAYQTAVNIGGHVFKGILYDQGPDSHL 233
           +SG+E  +FPAE++SPAVFRCVRVS  D+ +D+YAYQTAVNIGGHVFKGILYDQGP++  
Sbjct: 204 TSGLEIGNFPAELNSPAVFRCVRVSSADDTDDQYAYQTAVNIGGHVFKGILYDQGPEN-- 261

Query: 232 HHQHPGE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLDPGSLYPAPLSAFMA 56
           ++  PGE                                    LLDP SLY  PL++FMA
Sbjct: 262 NYIPPGETSSGGGGSSSGVQPLNFIAGAADATTGSGGSTAALPLLDPSSLYSTPLNSFMA 321

Query: 55  STQFF 41
            TQFF
Sbjct: 322 GTQFF 326


>emb|CBI17425.3| unnamed protein product [Vitis vinifera]
          Length = 317

 Score =  111 bits (277), Expect = 8e-23
 Identities = 73/169 (43%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
 Frame = -3

Query: 541 WVPASKRREXXXXXXXXXXXXQPEPSKRPRELP---IXXXXXXXXTSSGMEAISFPAEVS 371
           WVPA+KRRE              E  KR RE P             +SG+E  +FP+EV+
Sbjct: 125 WVPAAKRRERQQHLTLRG-----ENPKRQRENPSSSALACTRLPTHTSGLEIANFPSEVN 179

Query: 370 SPAVFRCVRVSPMDEAEDEYAYQTAVNIGGHVFKGILYDQGPDSHL----HHQHPGEXXX 203
           SPAVFRCVRVS +DE +D+YAYQTAVNIGGHVFKGILYD GP+ H          G    
Sbjct: 180 SPAVFRCVRVSSIDETDDQYAYQTAVNIGGHVFKGILYDHGPEGHYGGGESSSAGGGGLQ 239

Query: 202 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLDPGSLYPAPLSAFMA 56
                                          A LDP SLYPAPL+ FMA
Sbjct: 240 QLNLITGAAAAASTSTATAATTGSGSAGAAAAFLDP-SLYPAPLNTFMA 287


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