BLASTX nr result

ID: Dioscorea21_contig00011104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011104
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-55
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi...   218   3e-55
ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group] g...   213   2e-53
ref|XP_002307852.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53
gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indi...   213   2e-53

>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Vitis vinifera]
            gi|297745081|emb|CBI38673.3| unnamed protein product
            [Vitis vinifera]
          Length = 900

 Score =  219 bits (557), Expect = 2e-55
 Identities = 103/151 (68%), Positives = 128/151 (84%)
 Frame = -3

Query: 454  NLHITSSMIDVFSILNRFTEAEDLYLKLKASGVIFDVIAYSIVVRMYIKAVSLKDACLVL 275
            NLHI  +MID++S L RF++AE+LYLKLK+S +  D+IA+SIVVRMY+K+ SLKDAC VL
Sbjct: 553  NLHIMCTMIDIYSTLGRFSDAENLYLKLKSSEISLDMIAFSIVVRMYVKSGSLKDACSVL 612

Query: 274  DTLENQKDIVPDKFLFMDMLRLYQQCGMLEKLANAYYLLLRCGVTWDEAMYNCVINCCGR 95
            +T++ QK+IVPD +LF DMLR+YQQCGML+KL + YY +L+ GVTWD  MYNCVINCC R
Sbjct: 613  ETMDEQKNIVPDIYLFCDMLRIYQQCGMLDKLQDLYYRILKTGVTWDSEMYNCVINCCAR 672

Query: 94   ALPVDELSRLFNEMIHCGYAANTITFNVMLD 2
            ALPVDELSRLF+EM+  G+A NTIT NVMLD
Sbjct: 673  ALPVDELSRLFDEMLLHGFAPNTITLNVMLD 703


>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Cucumis sativus]
          Length = 894

 Score =  218 bits (556), Expect = 3e-55
 Identities = 98/151 (64%), Positives = 127/151 (84%)
 Frame = -3

Query: 454 NLHITSSMIDVFSILNRFTEAEDLYLKLKASGVIFDVIAYSIVVRMYIKAVSLKDACLVL 275
           NLHIT +MID++SI+ RF++ E LYL L++SG+  D+IAY++VVRMY+KA SL+DAC VL
Sbjct: 547 NLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVL 606

Query: 274 DTLENQKDIVPDKFLFMDMLRLYQQCGMLEKLANAYYLLLRCGVTWDEAMYNCVINCCGR 95
           D +  Q+DIVPD +L  DMLR+YQ+CGM+ KLA+ YY +L+ GV+WD+ MYNCVINCC R
Sbjct: 607 DLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSR 666

Query: 94  ALPVDELSRLFNEMIHCGYAANTITFNVMLD 2
           ALPVDELSRLF+EM+ CG+A NT+T NVMLD
Sbjct: 667 ALPVDELSRLFDEMLQCGFAPNTVTLNVMLD 697


>ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group]
            gi|50725891|dbj|BAD33419.1| putative fertility restorer
            [Oryza sativa Japonica Group] gi|50726131|dbj|BAD33652.1|
            putative fertility restorer [Oryza sativa Japonica Group]
            gi|113631443|dbj|BAF25124.1| Os09g0423300 [Oryza sativa
            Japonica Group] gi|125605742|gb|EAZ44778.1| hypothetical
            protein OsJ_29409 [Oryza sativa Japonica Group]
          Length = 962

 Score =  213 bits (541), Expect = 2e-53
 Identities = 100/151 (66%), Positives = 126/151 (83%)
 Frame = -3

Query: 454  NLHITSSMIDVFSILNRFTEAEDLYLKLKASGVIFDVIAYSIVVRMYIKAVSLKDACLVL 275
            NL I  SMIDVFSI+ RFT+AE LYL+LKAS  + D+IAYS++VRMY KA   +DACLVL
Sbjct: 610  NLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVL 669

Query: 274  DTLENQKDIVPDKFLFMDMLRLYQQCGMLEKLANAYYLLLRCGVTWDEAMYNCVINCCGR 95
            + +E QK+IVPDK+LF+DMLR YQ+CG+LEKL++ YY +L+  V  DEAMYNC+INCCGR
Sbjct: 670  EDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGR 729

Query: 94   ALPVDELSRLFNEMIHCGYAANTITFNVMLD 2
            A+PVDELSR+F+EMI  G+ ANT+T NV+LD
Sbjct: 730  AIPVDELSRIFDEMIQQGHLANTVTLNVLLD 760


>ref|XP_002307852.1| predicted protein [Populus trichocarpa] gi|222853828|gb|EEE91375.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  213 bits (541), Expect = 2e-53
 Identities = 96/151 (63%), Positives = 126/151 (83%)
 Frame = -3

Query: 454 NLHITSSMIDVFSILNRFTEAEDLYLKLKASGVIFDVIAYSIVVRMYIKAVSLKDACLVL 275
           NLHI+ +MID+++ + +F E E LY+KLK+SG+  DVIA+SIV+RMY+KA SLKDAC VL
Sbjct: 323 NLHISCTMIDIYTTMGQFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVL 382

Query: 274 DTLENQKDIVPDKFLFMDMLRLYQQCGMLEKLANAYYLLLRCGVTWDEAMYNCVINCCGR 95
           +T+E +KD+VPD +LF DMLR+YQQCGM++KL + Y+ +L+ GV WD+ +YNC+INCC R
Sbjct: 383 ETMEKEKDMVPDIYLFRDMLRVYQQCGMMDKLNDLYFKILKSGVVWDQELYNCLINCCAR 442

Query: 94  ALPVDELSRLFNEMIHCGYAANTITFNVMLD 2
           ALPV ELSRLFNEM+  G+  NTITFNVMLD
Sbjct: 443 ALPVGELSRLFNEMLQRGFDPNTITFNVMLD 473


>gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
          Length = 962

 Score =  213 bits (541), Expect = 2e-53
 Identities = 100/151 (66%), Positives = 126/151 (83%)
 Frame = -3

Query: 454  NLHITSSMIDVFSILNRFTEAEDLYLKLKASGVIFDVIAYSIVVRMYIKAVSLKDACLVL 275
            NL I  SMIDVFSI+ RFT+AE LYL+LKAS  + D+IAYS++VRMY KA   +DACLVL
Sbjct: 610  NLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVL 669

Query: 274  DTLENQKDIVPDKFLFMDMLRLYQQCGMLEKLANAYYLLLRCGVTWDEAMYNCVINCCGR 95
            + +E QK+IVPDK+LF+DMLR YQ+CG+LEKL++ YY +L+  V  DEAMYNC+INCCGR
Sbjct: 670  EDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGR 729

Query: 94   ALPVDELSRLFNEMIHCGYAANTITFNVMLD 2
            A+PVDELSR+F+EMI  G+ ANT+T NV+LD
Sbjct: 730  AIPVDELSRIFDEMIQQGHLANTVTLNVLLD 760


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