BLASTX nr result
ID: Dioscorea21_contig00011093
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00011093
(952 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi... 322 6e-86
ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|2... 322 8e-86
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera] 322 8e-86
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,... 321 1e-85
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi... 306 6e-81
>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Vitis vinifera]
Length = 547
Score = 322 bits (826), Expect = 6e-86
Identities = 153/314 (48%), Positives = 225/314 (71%)
Frame = +1
Query: 7 YCLLDTLLSTYEAAPSGPRVFDILVQTYAKMRMLDHAFDACSHLMDRGFSISLTSFNALL 186
+ ++D+LLS+Y S PRVFD+LVQ+Y+K+RM + FD C +L + GFS+SL SFN LL
Sbjct: 139 FLVVDSLLSSYNITGSNPRVFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNTLL 198
Query: 187 RVAHKSSRYDLAWKVYEYMLHRRVYPDRNSIETMTNVMCKQGSLQRIIGVLDKINGKRCA 366
V KS Y L WK+YE+M+ R YP+ S+ M + +CK+G+LQ+ + +LD+I+GKRC+
Sbjct: 199 HVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS 258
Query: 367 PAVIVNSGLWFMIFKKDNFNVDHGIVLLKRLLQKDMIVDGVVYSLIIFARCERGELDNAY 546
P VIVN+ + F + ++ V+ G+++LKRLLQK+MI+D + YSLI +A+ + G LD+A+
Sbjct: 259 PIVIVNTCMIFRMLEEGR--VEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAW 316
Query: 547 EMFDEMLKRGCGSNAFVYTCFIGAHCKSGRIEEAIRLMHEMQLSGFKPYQKTYSYMIEGC 726
E+++EML RG NAFVYT FIG+HC GRIEEA LM +M+ +G PY +T++ +I GC
Sbjct: 317 EVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGC 376
Query: 727 SMSGRLDECMTFYEEMIKHGFVPDSDACNQMIGKLCECGKVEKANDILTVLLDKGFKANQ 906
S +GRL+E + E M++ G VP A N M GKLCE G V++A+++LT+LLDKGF ++
Sbjct: 377 SKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDE 436
Query: 907 VTYMILMKGFGDAG 948
+TY L+ +G G
Sbjct: 437 ITYSNLIASYGKLG 450
>ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|222848159|gb|EEE85706.1|
predicted protein [Populus trichocarpa]
Length = 556
Score = 322 bits (825), Expect = 8e-86
Identities = 152/310 (49%), Positives = 228/310 (73%)
Frame = +1
Query: 7 YCLLDTLLSTYEAAPSGPRVFDILVQTYAKMRMLDHAFDACSHLMDRGFSISLTSFNALL 186
+ +LD+LLS+Y+ S P VFD+LVQ YAK RM + FD C L + F++SL SFN L+
Sbjct: 146 FLVLDSLLSSYKIIISSPLVFDLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSLISFNTLI 205
Query: 187 RVAHKSSRYDLAWKVYEYMLHRRVYPDRNSIETMTNVMCKQGSLQRIIGVLDKINGKRCA 366
V KS + LAWK+YE+MLHRR YP+ +IE+M + +CK+G LQ I+ +LDKI+GKRC+
Sbjct: 206 HVVQKSDKSPLAWKIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCS 265
Query: 367 PAVIVNSGLWFMIFKKDNFNVDHGIVLLKRLLQKDMIVDGVVYSLIIFARCERGELDNAY 546
P VIVN+ L F I ++ V+ G+ LLK +L+K+MI+D V YSLI++A+ + G L++A
Sbjct: 266 PVVIVNTCLVFRILEEGR--VEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAM 323
Query: 547 EMFDEMLKRGCGSNAFVYTCFIGAHCKSGRIEEAIRLMHEMQLSGFKPYQKTYSYMIEGC 726
++++EMLKRG +N+FVYT FIGA+CK RIEEA +L+ EM+ G KPY T+++++EGC
Sbjct: 324 QVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGC 383
Query: 727 SMSGRLDECMTFYEEMIKHGFVPDSDACNQMIGKLCECGKVEKANDILTVLLDKGFKANQ 906
+ +GR++E +++ ++M++ G VP A N+M+GKLC V +AN++LT LLD+GF A++
Sbjct: 384 AKAGRVEETLSYCKKMMEMGHVPSLSAFNEMVGKLCRIEDVTRANEMLTNLLDEGFLADE 443
Query: 907 VTYMILMKGF 936
+TY L+ G+
Sbjct: 444 ITYSNLISGY 453
Score = 73.6 bits (179), Expect = 7e-11
Identities = 43/149 (28%), Positives = 69/149 (46%)
Frame = +1
Query: 502 IIFARCERGELDNAYEMFDEMLKRGCGSNAFVYTCFIGAHCKSGRIEEAIRLMHEMQLSG 681
+I A C+ G+L M D++ + C V TC + + GR+E + L+ M
Sbjct: 239 MISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRKN 298
Query: 682 FKPYQKTYSYMIEGCSMSGRLDECMTFYEEMIKHGFVPDSDACNQMIGKLCECGKVEKAN 861
YS ++ G L+ M YEEM+K GF +S IG C+ ++E+AN
Sbjct: 299 MILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEAN 358
Query: 862 DILTVLLDKGFKANQVTYMILMKGFGDAG 948
+L + + G K T+ L++G AG
Sbjct: 359 QLLQEMENMGLKPYGDTFNFLLEGCAKAG 387
Score = 62.0 bits (149), Expect = 2e-07
Identities = 47/254 (18%), Positives = 105/254 (41%)
Frame = +1
Query: 136 LMDRGFSISLTSFNALLRVAHKSSRYDLAWKVYEYMLHRRVYPDRNSIETMTNVMCKQGS 315
++ + + +++ ++ K + A +VYE ML R + + CK+
Sbjct: 294 MLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEER 353
Query: 316 LQRIIGVLDKINGKRCAPAVIVNSGLWFMIFKKDNFNVDHGIVLLKRLLQKDMIVDGVVY 495
++ +L ++ P + L K V+ + K++++ + +
Sbjct: 354 IEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGR--VEETLSYCKKMMEMGHVPSLSAF 411
Query: 496 SLIIFARCERGELDNAYEMFDEMLKRGCGSNAFVYTCFIGAHCKSGRIEEAIRLMHEMQL 675
+ ++ C ++ A EM +L G ++ Y+ I + K+ +I+E ++L +EM+
Sbjct: 412 NEMVGKLCRIEDVTRANEMLTNLLDEGFLADEITYSNLISGYAKNNQIQEMLKLYYEMEY 471
Query: 676 SGFKPYQKTYSYMIEGCSMSGRLDECMTFYEEMIKHGFVPDSDACNQMIGKLCECGKVEK 855
P ++ +I+G G+L+E + MI P D +I E G +
Sbjct: 472 RSLSPGLMGFTSLIKGLCNCGKLEEAEKYLRIMIGRSLNPREDVYEALIKVYFEKGDKRR 531
Query: 856 ANDILTVLLDKGFK 897
A ++ ++ KG K
Sbjct: 532 ALNLYNEMVSKGLK 545
>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
Length = 642
Score = 322 bits (825), Expect = 8e-86
Identities = 153/314 (48%), Positives = 225/314 (71%)
Frame = +1
Query: 7 YCLLDTLLSTYEAAPSGPRVFDILVQTYAKMRMLDHAFDACSHLMDRGFSISLTSFNALL 186
+ ++D+LLS+Y S PRVFD+LVQ+Y+K+RM + FD C +L + GFS+SL SFN LL
Sbjct: 139 FLVVDSLLSSYNITGSNPRVFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNXLL 198
Query: 187 RVAHKSSRYDLAWKVYEYMLHRRVYPDRNSIETMTNVMCKQGSLQRIIGVLDKINGKRCA 366
V KS Y L WK+YE+M+ R YP+ S+ M + +CK+G+LQ+ + +LD+I+GKRC+
Sbjct: 199 HVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS 258
Query: 367 PAVIVNSGLWFMIFKKDNFNVDHGIVLLKRLLQKDMIVDGVVYSLIIFARCERGELDNAY 546
P VIVN+ + F + ++ V+ G+++LKRLLQK+MI+D + YSLI +A+ + G LD+A+
Sbjct: 259 PIVIVNTCMIFRMLEEGR--VEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAW 316
Query: 547 EMFDEMLKRGCGSNAFVYTCFIGAHCKSGRIEEAIRLMHEMQLSGFKPYQKTYSYMIEGC 726
E+++EML RG NAFVYT FIG+HC GRIEEA LM +M+ +G PY +T++ +I GC
Sbjct: 317 EVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGC 376
Query: 727 SMSGRLDECMTFYEEMIKHGFVPDSDACNQMIGKLCECGKVEKANDILTVLLDKGFKANQ 906
S +GRL+E + E M++ G VP A N M GKLCE G V++A+++LT+LLDKGF ++
Sbjct: 377 SKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDE 436
Query: 907 VTYMILMKGFGDAG 948
+TY L+ +G G
Sbjct: 437 ITYSNLIASYGKLG 450
>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 619
Score = 321 bits (823), Expect = 1e-85
Identities = 149/310 (48%), Positives = 222/310 (71%)
Frame = +1
Query: 7 YCLLDTLLSTYEAAPSGPRVFDILVQTYAKMRMLDHAFDACSHLMDRGFSISLTSFNALL 186
+ ++D+LL +Y+ S P VF++LVQ YAK+R+ + F C +L + GF +SL SFN L+
Sbjct: 147 FLIVDSLLDSYKIIVSSPLVFNLLVQAYAKLRLFEIGFKICFYLEEHGFFLSLLSFNTLI 206
Query: 187 RVAHKSSRYDLAWKVYEYMLHRRVYPDRNSIETMTNVMCKQGSLQRIIGVLDKINGKRCA 366
V KS +Y L WK+YE+M+H+R+YP+ +I TM N +CK+G LQ + +LD+I+GKRC
Sbjct: 207 HVVQKSDQYPLVWKIYEHMIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGKRCR 266
Query: 367 PAVIVNSGLWFMIFKKDNFNVDHGIVLLKRLLQKDMIVDGVVYSLIIFARCERGELDNAY 546
P VI+N+ + F I ++ VD GI +LK +LQK+MI+D V YSLI+FA+ G LD+A
Sbjct: 267 PLVIINACMVFRILQEGR--VDVGIGILKGMLQKNMILDTVAYSLIVFAKVRLGNLDSAL 324
Query: 547 EMFDEMLKRGCGSNAFVYTCFIGAHCKSGRIEEAIRLMHEMQLSGFKPYQKTYSYMIEGC 726
E+++ MLKRG +N+FV+T IGA+C G+IE+A +L EM G +PY +T++++IEGC
Sbjct: 325 EVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFGEMGTMGLEPYDETFNFLIEGC 384
Query: 727 SMSGRLDECMTFYEEMIKHGFVPDSDACNQMIGKLCECGKVEKANDILTVLLDKGFKANQ 906
+ +GR++EC++++E+MI+ G VP A N+MI KLCE G+V +AN LT LLDKGF ++
Sbjct: 385 AKAGRVEECLSYFEKMIERGLVPSLLAFNKMIAKLCETGEVNQANTFLTRLLDKGFSPDE 444
Query: 907 VTYMILMKGF 936
TY LM G+
Sbjct: 445 TTYSYLMTGY 454
Score = 66.6 bits (161), Expect = 8e-09
Identities = 40/168 (23%), Positives = 73/168 (43%)
Frame = +1
Query: 445 LLKRLLQKDMIVDGVVYSLIIFARCERGELDNAYEMFDEMLKRGCGSNAFVYTCFIGAHC 624
+ + ++ K + + +I A C+ G+L ++ D + + C + C +
Sbjct: 221 IYEHMIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGKRCRPLVIINACMVFRIL 280
Query: 625 KSGRIEEAIRLMHEMQLSGFKPYQKTYSYMIEGCSMSGRLDECMTFYEEMIKHGFVPDSD 804
+ GR++ I ++ M YS ++ G LD + YE M+K GF +S
Sbjct: 281 QEGRVDVGIGILKGMLQKNMILDTVAYSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSF 340
Query: 805 ACNQMIGKLCECGKVEKANDILTVLLDKGFKANQVTYMILMKGFGDAG 948
+IG C GK+EKAN + + G + T+ L++G AG
Sbjct: 341 VHTVLIGAYCNGGKIEKANQLFGEMGTMGLEPYDETFNFLIEGCAKAG 388
Score = 64.7 bits (156), Expect = 3e-08
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 3/239 (1%)
Frame = +1
Query: 88 YAKMRM--LDHAFDACSHLMDRGFSISLTSFNALLRVAHKSSRYDLAWKVYEYMLHRRVY 261
+AK+R+ LD A + ++ RGF+ + L+ + + A +++ M +
Sbjct: 312 FAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFGEMGTMGLE 371
Query: 262 PDRNSIETMTNVMCKQGSLQRIIGVLDKINGKRCAPAVIVNSGLWFMIFKK-DNFNVDHG 438
P + + K G ++ + +K+ + P+++ + MI K + V+
Sbjct: 372 PYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFNK---MIAKLCETGEVNQA 428
Query: 439 IVLLKRLLQKDMIVDGVVYSLIIFARCERGELDNAYEMFDEMLKRGCGSNAFVYTCFIGA 618
L RLL K D YS ++ ++ +++ EM R V+T I +
Sbjct: 429 NTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYYEMEYRPLSPGLLVFTPLIRS 488
Query: 619 HCKSGRIEEAIRLMHEMQLSGFKPYQKTYSYMIEGCSMSGRLDECMTFYEEMIKHGFVP 795
C G++E+A + + M+ P Q+ Y +I G + Y EMI GF P
Sbjct: 489 LCHCGKLEQAEKYLRIMKGRSLNPSQQVYEALIAGHLEKSDTARALQLYNEMISKGFTP 547
>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 539
Score = 306 bits (783), Expect = 6e-81
Identities = 143/314 (45%), Positives = 220/314 (70%)
Frame = +1
Query: 7 YCLLDTLLSTYEAAPSGPRVFDILVQTYAKMRMLDHAFDACSHLMDRGFSISLTSFNALL 186
Y ++D+L+ +YE S P VFD+LVQT AK+R++D A CSHL +RGFS+SL SFN L+
Sbjct: 142 YSVVDSLMDSYEVTGSSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLI 201
Query: 187 RVAHKSSRYDLAWKVYEYMLHRRVYPDRNSIETMTNVMCKQGSLQRIIGVLDKINGKRCA 366
V KS + WK+YE M+ +RVYP+ ++ M N +CK+G LQ +L++I+G RC+
Sbjct: 202 HVVEKSDQNLKVWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCS 261
Query: 367 PAVIVNSGLWFMIFKKDNFNVDHGIVLLKRLLQKDMIVDGVVYSLIIFARCERGELDNAY 546
++IVN+ L + I ++ V+ GI LLKR+LQK+M++D + YSLI++A+ + G + + +
Sbjct: 262 ASLIVNACLIYRILEEGR--VEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTW 319
Query: 547 EMFDEMLKRGCGSNAFVYTCFIGAHCKSGRIEEAIRLMHEMQLSGFKPYQKTYSYMIEGC 726
E+F+EM +RG +N+F+YT FIG HC+ G++EEA LM EM+ G KPY +T++ +IEGC
Sbjct: 320 EVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGC 379
Query: 727 SMSGRLDECMTFYEEMIKHGFVPDSDACNQMIGKLCECGKVEKANDILTVLLDKGFKANQ 906
++SG +E ++ E+M++ GF+P N I K+CE G V+KAN +LT+LLDKGF ++
Sbjct: 380 AISGHSEEILSMCEKMLERGFLPSCSVFNVAIAKICEKGDVKKANALLTILLDKGFLPDE 439
Query: 907 VTYMILMKGFGDAG 948
TY L+ G+ +G
Sbjct: 440 TTYTNLIIGYRKSG 453
Score = 68.2 bits (165), Expect = 3e-09
Identities = 39/169 (23%), Positives = 81/169 (47%)
Frame = +1
Query: 445 LLKRLLQKDMIVDGVVYSLIIFARCERGELDNAYEMFDEMLKRGCGSNAFVYTCFIGAHC 624
+ +++++K + + + ++I + C+ G+L +M + + C ++ V C I
Sbjct: 216 IYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRIL 275
Query: 625 KSGRIEEAIRLMHEMQLSGFKPYQKTYSYMIEGCSMSGRLDECMTFYEEMIKHGFVPDSD 804
+ GR+E+ I L+ M YS ++ +G + +EEM + GF +S
Sbjct: 276 EEGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSF 335
Query: 805 ACNQMIGKLCECGKVEKANDILTVLLDKGFKANQVTYMILMKGFGDAGN 951
IG C GKVE+A+ ++ + + G K T+ +L++G +G+
Sbjct: 336 IYTLFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGH 384
Score = 59.3 bits (142), Expect = 1e-06
Identities = 49/240 (20%), Positives = 99/240 (41%)
Frame = +1
Query: 67 FDILVQTYAKMRMLDHAFDACSHLMDRGFSISLTSFNALLRVAHKSSRYDLAWKVYEYML 246
+ ++V K + ++ + +RGF + + + V + + + A + + M
Sbjct: 302 YSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQEME 361
Query: 247 HRRVYPDRNSIETMTNVMCKQGSLQRIIGVLDKINGKRCAPAVIVNSGLWFMIFKKDNFN 426
+ + P + + G + I+ + +K+ + P+ V + I +K +
Sbjct: 362 NMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAIAKICEKGD-- 419
Query: 427 VDHGIVLLKRLLQKDMIVDGVVYSLIIFARCERGELDNAYEMFDEMLKRGCGSNAFVYTC 606
V LL LL K + D Y+ +I + GE+ +++ EM R V+
Sbjct: 420 VKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEMGARLLSPGVSVFFA 479
Query: 607 FIGAHCKSGRIEEAIRLMHEMQLSGFKPYQKTYSYMIEGCSMSGRLDECMTFYEEMIKHG 786
IG+ C+SGR+EEA + + ++ S P Y +I G + + Y EM+ G
Sbjct: 480 LIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALILFYLKKGNRAKALELYNEMMFDG 539