BLASTX nr result

ID: Dioscorea21_contig00011090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011090
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|NP_001044320.2| Os01g0761000 [Oryza sativa Japonica Group] g...    55   6e-06
gb|EEC71523.1| hypothetical protein OsI_03824 [Oryza sativa Indi...    55   8e-06
gb|ABK95860.1| unknown [Populus trichocarpa]                           55   8e-06

>ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|222845483|gb|EEE83030.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
 Frame = +2

Query: 2   NGNRTYLRKNPYVPVSTITGGRKRCLTVVAKAVEDDSDSSSG-SFVKYVRNAWNNSEDRL 178
           +G R   R    +P+STI   R+ C+ VV KA  + S+SS+  S VK V+N W++SEDRL
Sbjct: 16  HGKRIPFRTLQKLPLSTIKE-RQNCVAVVVKATGESSESSTSLSIVKSVQNIWDDSEDRL 74

Query: 179 ALVGLGFA 202
            LVGLGFA
Sbjct: 75  PLVGLGFA 82


>ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|222840724|gb|EEE78271.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
 Frame = +2

Query: 2   NGNRTYLRKNPYVPVSTITGGRKRCLTVVAKAVEDDSDSSSG-SFVKYVRNAWNNSEDRL 178
           +G RT       +P+S I   R+ C++VV +A  + S+SS+    VK V+N W++SEDRL
Sbjct: 16  HGKRTLSSTLQTLPLSPIKD-RQNCVSVVVRATGESSESSAPLGIVKSVKNIWDDSEDRL 74

Query: 179 ALVGLGFA 202
           ALVGLGFA
Sbjct: 75  ALVGLGFA 82


>ref|NP_001044320.2| Os01g0761000 [Oryza sativa Japonica Group]
           gi|14587304|dbj|BAB61215.1| P0460E08.25 [Oryza sativa
           Japonica Group] gi|20804672|dbj|BAB92360.1| unknown
           protein [Oryza sativa Japonica Group]
           gi|222619281|gb|EEE55413.1| hypothetical protein
           OsJ_03533 [Oryza sativa Japonica Group]
           gi|255673703|dbj|BAF06234.2| Os01g0761000 [Oryza sativa
           Japonica Group]
          Length = 151

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = +2

Query: 32  PYVPVSTITGGRKRCLTVVA-KAVEDDSDSSSGSFVKYVRNAWNNSEDRLALVGLGFA 202
           P VP +    GR R   VVA KA +D S+ SSGS VKYV++++++ ED  AL G+GFA
Sbjct: 30  PAVPSTRFVSGRMRSRNVVAAKAAQDSSEPSSGSVVKYVQSSFSSPEDLFALAGIGFA 87


>gb|EEC71523.1| hypothetical protein OsI_03824 [Oryza sativa Indica Group]
          Length = 151

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = +2

Query: 32  PYVPVSTITGGRKRCLTVVA-KAVEDDSDSSSGSFVKYVRNAWNNSEDRLALVGLGFA 202
           P VP +    GR R   VVA KA +D S+ SSGS VKYV+++++  ED  AL G+GFA
Sbjct: 30  PAVPSTRFVSGRMRSRNVVAAKAAQDSSEPSSGSVVKYVQSSFSTPEDLFALAGIGFA 87


>gb|ABK95860.1| unknown [Populus trichocarpa]
          Length = 146

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = +2

Query: 38  VPVSTITGGRKRCLTVVAKAVEDDSDSSSG-SFVKYVRNAWNNSEDRLALVGLGFA 202
           +P+STI   R+ C+ V  KA  + S+SS+  S VK V+N W++SEDRL LVGLGFA
Sbjct: 28  LPLSTIKE-RQNCVAVAVKATGESSESSTSLSIVKSVQNIWDDSEDRLPLVGLGFA 82


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