BLASTX nr result

ID: Dioscorea21_contig00011085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011085
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147208.1| PREDICTED: peroxisome biogenesis protein 19-...   258   2e-66
ref|NP_001236156.1| uncharacterized protein LOC100500051 [Glycin...   257   5e-66
ref|XP_002304276.1| predicted protein [Populus trichocarpa] gi|2...   250   5e-64
ref|XP_003608711.1| Peroxisomal biogenesis factor [Medicago trun...   250   6e-64
ref|XP_002269360.1| PREDICTED: peroxisome biogenesis protein 19-...   248   2e-63

>ref|XP_004147208.1| PREDICTED: peroxisome biogenesis protein 19-1-like [Cucumis sativus]
            gi|449504984|ref|XP_004162347.1| PREDICTED: peroxisome
            biogenesis protein 19-1-like [Cucumis sativus]
          Length = 237

 Score =  258 bits (660), Expect = 2e-66
 Identities = 139/236 (58%), Positives = 168/236 (71%), Gaps = 9/236 (3%)
 Frame = -2

Query: 1085 FKKIDLAPERKSNASSS-------TPVQGLGLGLPDLKAKKTVKQRAGAATKTGSSHASE 927
            F+K DL P    N   +       + VQGLG+GLPDL++KK  KQ+         SH SE
Sbjct: 19   FQKFDLNPSLSRNGDGAESRAVLPSGVQGLGMGLPDLRSKKKGKQKVSK-----ESHVSE 73

Query: 926  ALEKLTQQTREAVRGLESATASAGTRGTDADGLQEDEAAMVEEFIKKFEELTGSQDMESI 747
            AL+KL +QTREAV+GLES +           G +  E A++E+++K+FEE+ GSQDMESI
Sbjct: 74   ALDKLREQTREAVKGLESVS-----------GPKPGEDALMEDWVKQFEEMAGSQDMESI 122

Query: 746  MDTVMQQLLSKDILHEPMKEIGERYPKWLEEHKDRLSKEEYGRYHQQYELILKLNEAFEH 567
            ++T+MQQLLSK+ILHEPMKEIGERYPKWLE+HK  LSKEEY RY QQY LI  LN  +E 
Sbjct: 123  VETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYNLIKDLNIVYER 182

Query: 566  EPDNFNNIVDLMQKMQECGQPPDDIVQELAPELDLRNLGGQLSPDM--DPTKCCIM 405
            EPDNFN IV+LMQKMQECGQPP+DIVQELAP+ DL NL  QLSP+M      CCIM
Sbjct: 183  EPDNFNKIVELMQKMQECGQPPNDIVQELAPDFDLSNL-AQLSPEMLESQPNCCIM 237


>ref|NP_001236156.1| uncharacterized protein LOC100500051 [Glycine max]
            gi|255628831|gb|ACU14760.1| unknown [Glycine max]
          Length = 244

 Score =  257 bits (656), Expect = 5e-66
 Identities = 135/223 (60%), Positives = 172/223 (77%), Gaps = 2/223 (0%)
 Frame = -2

Query: 1067 APERKSNASSSTPVQGLGLGLPDLKAKKTVKQRAGAATKTGSSHASEALEKLTQQTREAV 888
            A ++K + S ++ VQGLG+GLPDL+ KK  KQ+A +      SH SEAL KL +QT+EAV
Sbjct: 35   ANKKKESPSLASGVQGLGMGLPDLRTKKKGKQKAASK----DSHVSEALNKLREQTKEAV 90

Query: 887  RGLESATASAGTRGTDADGLQEDEAAMVEEFIKKFEELTGSQDMESIMDTVMQQLLSKDI 708
            +GLES +         AD L +D  A++E+++K+FE+L GSQDMESI++T+MQQLLSK+I
Sbjct: 91   KGLESISTPT------ADDLGKD--ALMEDWVKQFEQLAGSQDMESIVETMMQQLLSKEI 142

Query: 707  LHEPMKEIGERYPKWLEEHKDRLSKEEYGRYHQQYELILKLNEAFEHEPDNFNNIVDLMQ 528
            LHEPMKEI E+YPKWLEEHK  LSKEEY RY  QYELI  LNE ++++P NFN IV+L+Q
Sbjct: 143  LHEPMKEIAEKYPKWLEEHKSSLSKEEYDRYSHQYELIRNLNEVYDNDPGNFNKIVELIQ 202

Query: 527  KMQECGQPPDDIVQELAPELDLRNLGGQLSPDMDPTK--CCIM 405
            KMQECGQPP+DIVQELAP+ DL +L GQLSP+M  T+  CCIM
Sbjct: 203  KMQECGQPPNDIVQELAPDFDLASL-GQLSPEMLETQPNCCIM 244


>ref|XP_002304276.1| predicted protein [Populus trichocarpa] gi|222841708|gb|EEE79255.1|
            predicted protein [Populus trichocarpa]
          Length = 251

 Score =  250 bits (639), Expect = 5e-64
 Identities = 131/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
 Frame = -2

Query: 1043 SSSTPVQGLGLGLPDLKAKKTVKQRAGAATKTGSSHASEALEKLTQQTREAVRGLESATA 864
            S  T VQGLG+GLPDLK+KK  KQ+         SH  EAL+KL +QTREAV+GLES TA
Sbjct: 50   SLPTGVQGLGMGLPDLKSKKKGKQKVSK-----ESHVEEALDKLREQTREAVKGLESVTA 104

Query: 863  SAGTRGTDADGLQEDEAAMVEEFIKKFEELTGSQDMESIMDTVMQQLLSKDILHEPMKEI 684
            ++    +  D       A +++++K+FEEL GSQDMESI++T+MQQLLSK+ILHEPMKEI
Sbjct: 105  ASKPDDSSQD-------AFMDDWVKQFEELAGSQDMESIVETMMQQLLSKEILHEPMKEI 157

Query: 683  GERYPKWLEEHKDRLSKEEYGRYHQQYELILKLNEAFEHEPDNFNNIVDLMQKMQECGQP 504
            GERYPKWLEEHK  LSKE++ RY  QYELI  LN+ +E++P+N   I DLMQKMQECGQP
Sbjct: 158  GERYPKWLEEHKASLSKEDHERYSHQYELIKDLNDVYENDPNNHTKIFDLMQKMQECGQP 217

Query: 503  PDDIVQELAPELDLRNLGGQLSPDM--DPTKCCIM 405
            P+DIVQELAP++D  NL GQLSP+M      CCIM
Sbjct: 218  PNDIVQELAPDIDFANL-GQLSPEMLESQGNCCIM 251


>ref|XP_003608711.1| Peroxisomal biogenesis factor [Medicago truncatula]
            gi|355509766|gb|AES90908.1| Peroxisomal biogenesis factor
            [Medicago truncatula]
          Length = 248

 Score =  250 bits (638), Expect = 6e-64
 Identities = 134/221 (60%), Positives = 160/221 (72%), Gaps = 3/221 (1%)
 Frame = -2

Query: 1058 RKSNASSSTPVQGLGLGLPDLKAKKTVKQRAGAATKTGSSHASEALEKLTQQTREAVRGL 879
            +K + S  + VQGLGLGLPDLK+KK  KQ+         +H SEAL KL +QT+EAV+GL
Sbjct: 38   KKESPSLPSGVQGLGLGLPDLKSKKKGKQKVSK-----DAHVSEALNKLREQTKEAVKGL 92

Query: 878  ESATASAGTRGTDADGLQEDEAAMVEEFIKKFEELTGSQDMESIMDTVMQQLLSKDILHE 699
            E         G D  G    +  M+E+++K+FEEL GSQDMESI++T+MQQLLSK+IL E
Sbjct: 93   EFINPPGAGAGVDDLG----KDGMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEILAE 148

Query: 698  PMKEIGERYPKWLEEHKDRLSKEEYGRYHQQYELILKLNEAFEHEPDNFNNIVDLMQKMQ 519
            PMKEIGERYPKWLEEHK  LSKEEY RY  QYELI  LNE +E +  NFN IV+LMQKMQ
Sbjct: 149  PMKEIGERYPKWLEEHKANLSKEEYDRYSHQYELIRNLNEVYEKDSGNFNKIVELMQKMQ 208

Query: 518  ECGQPPDDIVQELAPELDLRNLGGQLSPDM---DPTKCCIM 405
            ECGQPP+DIVQELAP+ DL +L GQLSP+M       CCIM
Sbjct: 209  ECGQPPNDIVQELAPDFDLASL-GQLSPEMLDGSQPNCCIM 248


>ref|XP_002269360.1| PREDICTED: peroxisome biogenesis protein 19-1 [Vitis vinifera]
            gi|297741197|emb|CBI31928.3| unnamed protein product
            [Vitis vinifera]
          Length = 243

 Score =  248 bits (634), Expect = 2e-63
 Identities = 132/222 (59%), Positives = 164/222 (73%), Gaps = 3/222 (1%)
 Frame = -2

Query: 1061 ERKSNASSSTP-VQGLGLGLPDLKAKKTVKQRAGAATKTGSSHASEALEKLTQQTREAVR 885
            E+K    S  P VQGLG+GLPDLK+KK  KQ+         SH +EAL+KL +QTREAV+
Sbjct: 34   EQKQGTGSMPPGVQGLGMGLPDLKSKKKGKQKVSK-----ESHVAEALDKLREQTREAVK 88

Query: 884  GLESATASAGTRGTDADGLQEDEAAMVEEFIKKFEELTGSQDMESIMDTVMQQLLSKDIL 705
             LES T      G    G +  + AM+E+++K+FEEL GSQDMESI++T+MQQLLSK+IL
Sbjct: 89   ELESVT------GAQPGGDELGKDAMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEIL 142

Query: 704  HEPMKEIGERYPKWLEEHKDRLSKEEYGRYHQQYELILKLNEAFEHEPDNFNNIVDLMQK 525
            HEPMKEIGERYPKWL+EH+  LSKEE+ RY  QY LI  LNE +E++P NF  IV+LMQ+
Sbjct: 143  HEPMKEIGERYPKWLKEHEAGLSKEEFERYSHQYGLIKNLNEVYENDPGNFTKIVELMQQ 202

Query: 524  MQECGQPPDDIVQELAPELDLRNLGGQLSPDM--DPTKCCIM 405
            MQECGQPP+DIVQELAP+ DL NL GQLSP++      CC+M
Sbjct: 203  MQECGQPPNDIVQELAPDFDLANL-GQLSPELLESQPNCCLM 243


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