BLASTX nr result

ID: Dioscorea21_contig00011070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011070
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC67796.1| hypothetical protein OsI_35356 [Oryza sativa Indi...   280   3e-73
ref|NP_001065902.1| Os11g0181800 [Oryza sativa Japonica Group] g...   280   4e-73
ref|XP_003577768.1| PREDICTED: retinol dehydrogenase 12-like [Br...   273   3e-71
gb|ACF86600.1| unknown [Zea mays] gi|413925510|gb|AFW65442.1| re...   270   3e-70
ref|NP_001065901.1| Os11g0181700 [Oryza sativa Japonica Group] g...   269   7e-70

>gb|EEC67796.1| hypothetical protein OsI_35356 [Oryza sativa Indica Group]
          Length = 574

 Score =  280 bits (716), Expect = 3e-73
 Identities = 134/212 (63%), Positives = 171/212 (80%)
 Frame = -2

Query: 886 FNSSNKHLNILINNAGIMACPFQLSKDGIESQFAXXXXXXXXXXXXXLEKIKATAKETGI 707
           FNSS +HLN+LINNAG+M+CPF LSKDGIE QFA             L+K+KATAKETG+
Sbjct: 108 FNSSYRHLNVLINNAGVMSCPFGLSKDGIELQFATNHVGHFLLTNLLLDKMKATAKETGL 167

Query: 706 QGRIVNVSSVAHRRSDTSWFDLNVINDESKYKPFNAYARSKLANILHSNELSRCLKEKGS 527
           QGRI+NVSS++HR SD S FDL+ +ND+SKY+PF AY  SKLANILH+NELSR  +E+G 
Sbjct: 168 QGRIINVSSISHRGSDGSCFDLDKLNDKSKYRPFKAYGHSKLANILHANELSRRFQEEGC 227

Query: 526 NVTANSLHPGVIMTNISRSLDLNSVVMSLATLVKPFLKSIPQGAATTCYVALSPQIKDIS 347
           N+TANSLHPGVI TN+ R +  NS+++S+ +++KPFLKSIPQGAAT+CY+AL P +KD+S
Sbjct: 228 NLTANSLHPGVIATNLPRHILTNSLIISIFSVMKPFLKSIPQGAATSCYLALHPGLKDVS 287

Query: 346 GKYFADCNEASPSKEGEDEVLGKRLWEFSQQI 251
           GKYFADCNEA+P+    D  L K+LWEFS+++
Sbjct: 288 GKYFADCNEATPTAVARDAELAKKLWEFSEEL 319


>ref|NP_001065902.1| Os11g0181800 [Oryza sativa Japonica Group]
           gi|62734079|gb|AAX96188.1| short-chain dehydrogenase
           Tic32 [Oryza sativa Japonica Group]
           gi|77549000|gb|ABA91797.1| oxidoreductase, short chain
           dehydrogenase/reductase family protein, expressed [Oryza
           sativa Japonica Group] gi|113644606|dbj|BAF27747.1|
           Os11g0181800 [Oryza sativa Japonica Group]
           gi|215701351|dbj|BAG92775.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222615628|gb|EEE51760.1| hypothetical protein
           OsJ_33195 [Oryza sativa Japonica Group]
          Length = 329

 Score =  280 bits (715), Expect = 4e-73
 Identities = 134/212 (63%), Positives = 170/212 (80%)
 Frame = -2

Query: 886 FNSSNKHLNILINNAGIMACPFQLSKDGIESQFAXXXXXXXXXXXXXLEKIKATAKETGI 707
           FNSS +HLN+LINNAG+M+CPF LSKDGIE QFA             L+K+KATAKETG+
Sbjct: 108 FNSSYRHLNVLINNAGVMSCPFGLSKDGIELQFATNHVGHFLLTNLLLDKMKATAKETGL 167

Query: 706 QGRIVNVSSVAHRRSDTSWFDLNVINDESKYKPFNAYARSKLANILHSNELSRCLKEKGS 527
           QGRI+NVSS++HR SD S FDL+ +ND+SKY+PF AY  SKLANILH+NELSR  +E+G 
Sbjct: 168 QGRIINVSSISHRGSDGSCFDLDKLNDKSKYRPFKAYGHSKLANILHANELSRRFQEEGC 227

Query: 526 NVTANSLHPGVIMTNISRSLDLNSVVMSLATLVKPFLKSIPQGAATTCYVALSPQIKDIS 347
           N+TANSLHPGVI TN+ R +  NS+++S+ +++KPFLKSIPQGAAT CY+AL P +KD+S
Sbjct: 228 NLTANSLHPGVIATNLPRHILTNSLIISIFSVMKPFLKSIPQGAATNCYLALHPGLKDVS 287

Query: 346 GKYFADCNEASPSKEGEDEVLGKRLWEFSQQI 251
           GKYFADCNEA+P+    D  L K+LWEFS+++
Sbjct: 288 GKYFADCNEATPTAVARDAELAKKLWEFSEEL 319


>ref|XP_003577768.1| PREDICTED: retinol dehydrogenase 12-like [Brachypodium distachyon]
          Length = 323

 Score =  273 bits (699), Expect = 3e-71
 Identities = 136/214 (63%), Positives = 165/214 (77%)
 Frame = -2

Query: 886 FNSSNKHLNILINNAGIMACPFQLSKDGIESQFAXXXXXXXXXXXXXLEKIKATAKETGI 707
           FN S+KHLNILINNAGIMACPFQLSKDGIE QFA             L+K+K TAKETG+
Sbjct: 106 FNVSHKHLNILINNAGIMACPFQLSKDGIELQFATNHLGHFLLTNLLLDKMKWTAKETGV 165

Query: 706 QGRIVNVSSVAHRRSDTSWFDLNVINDESKYKPFNAYARSKLANILHSNELSRCLKEKGS 527
           QGRIVNVSS AHRRSD S FDLN +ND+S+Y+PF AY+ SKLANILH+NELSR  +E+G 
Sbjct: 166 QGRIVNVSSTAHRRSDGSGFDLNKLNDQSRYRPFRAYSHSKLANILHANELSRRFQEQGC 225

Query: 526 NVTANSLHPGVIMTNISRSLDLNSVVMSLATLVKPFLKSIPQGAATTCYVALSPQIKDIS 347
           ++TANSLHPG+I+TNI R    NS+++S+ +L K FLK  PQGAATTCY+AL P  K +S
Sbjct: 226 DLTANSLHPGIIVTNIVRYTATNSMLISILSLAKTFLKDTPQGAATTCYLALHPDAKGVS 285

Query: 346 GKYFADCNEASPSKEGEDEVLGKRLWEFSQQILK 245
           GKYFA CNEA P+    D  L KRLW FS+++++
Sbjct: 286 GKYFAGCNEAKPTAIARDAELAKRLWAFSEELVE 319


>gb|ACF86600.1| unknown [Zea mays] gi|413925510|gb|AFW65442.1| retinol
           dehydrogenase 12 [Zea mays]
          Length = 367

 Score =  270 bits (690), Expect = 3e-70
 Identities = 134/215 (62%), Positives = 170/215 (79%), Gaps = 1/215 (0%)
 Frame = -2

Query: 886 FNSSNKHLNILINNAGIMACPFQLSKDGIESQFAXXXXXXXXXXXXXLEKIKATAKETGI 707
           FNSS+KHLN+LINNAGIMACP+QLSKDGIE QFA             L+K+K+TA ETG+
Sbjct: 126 FNSSHKHLNLLINNAGIMACPYQLSKDGIELQFATNHVGHFLLTSLLLDKMKSTAAETGV 185

Query: 706 QGRIVNVSSVAHRRSDTSWFDLNVINDESKYKPFNAYARSKLANILHSNELSRCLKEKGS 527
           QGRI+NVSSVAH+RSD + F+LN +ND+++YKPF AYA SKLANILH+NELSR  +E+G 
Sbjct: 186 QGRIINVSSVAHKRSDGTCFELNKLNDKARYKPFIAYAHSKLANILHTNELSRRFQEEGC 245

Query: 526 NVTANSLHPGVIMTNISRSLDLNSVVMS-LATLVKPFLKSIPQGAATTCYVALSPQIKDI 350
           N+TANSLHPGVI+TNI R +  NS ++S L+ +    LKS+P+GAATTCY+AL P +K +
Sbjct: 246 NLTANSLHPGVIITNIIRYVAGNSALISALSPVANLVLKSVPRGAATTCYLALHPNVKGV 305

Query: 349 SGKYFADCNEASPSKEGEDEVLGKRLWEFSQQILK 245
           SGKYFADCNEA+P+    D  L KRLW FS++++K
Sbjct: 306 SGKYFADCNEATPTAVARDSELAKRLWSFSEELVK 340


>ref|NP_001065901.1| Os11g0181700 [Oryza sativa Japonica Group]
           gi|108864068|gb|ABG22391.1| oxidoreductase, short chain
           dehydrogenase/reductase family protein, expressed [Oryza
           sativa Japonica Group] gi|113644605|dbj|BAF27746.1|
           Os11g0181700 [Oryza sativa Japonica Group]
           gi|215692941|dbj|BAG88361.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218185368|gb|EEC67795.1| hypothetical protein
           OsI_35355 [Oryza sativa Indica Group]
           gi|222615627|gb|EEE51759.1| hypothetical protein
           OsJ_33194 [Oryza sativa Japonica Group]
          Length = 332

 Score =  269 bits (687), Expect = 7e-70
 Identities = 131/217 (60%), Positives = 171/217 (78%)
 Frame = -2

Query: 886 FNSSNKHLNILINNAGIMACPFQLSKDGIESQFAXXXXXXXXXXXXXLEKIKATAKETGI 707
           F+SS+ HLNILINNAGIM CPF+LSKDGIE QFA             L+K+K+TA++TG+
Sbjct: 108 FDSSHTHLNILINNAGIMGCPFKLSKDGIELQFATNHVGHFLLTNLLLDKMKSTARKTGV 167

Query: 706 QGRIVNVSSVAHRRSDTSWFDLNVINDESKYKPFNAYARSKLANILHSNELSRCLKEKGS 527
           QGRIVNVSS+AH+RSD S FDLN +ND+S+YKP  AYA SKLANILH+NEL++  +E+G 
Sbjct: 168 QGRIVNVSSIAHKRSDGSCFDLNKLNDKSRYKPLIAYAHSKLANILHANELAKRFQEEGC 227

Query: 526 NVTANSLHPGVIMTNISRSLDLNSVVMSLATLVKPFLKSIPQGAATTCYVALSPQIKDIS 347
           N+TANSLHPGVI+TNI+R +  NSV++S+ ++   FLK+  QGAATTCY+AL P++KD+S
Sbjct: 228 NLTANSLHPGVILTNITRYVVTNSVMVSILSVGNLFLKNTQQGAATTCYLALHPELKDVS 287

Query: 346 GKYFADCNEASPSKEGEDEVLGKRLWEFSQQILKKSK 236
           GKYFADC EA+P     D  L KRLW+FS+Q++  ++
Sbjct: 288 GKYFADCKEATPRPAARDAELAKRLWDFSEQLVDTNR 324


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