BLASTX nr result

ID: Dioscorea21_contig00011060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011060
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320176.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002276076.2| PREDICTED: BTB/POZ domain-containing protein...    83   3e-14
ref|XP_002511953.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|XP_002301392.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
gb|AFK48373.1| unknown [Lotus japonicus]                               69   3e-10

>ref|XP_002320176.1| predicted protein [Populus trichocarpa] gi|222860949|gb|EEE98491.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
 Frame = +1

Query: 4   SSILFNVPGHTFAAPVIGFQAYDASNLRSKSTRELEFNVTGDPISIKF---ITKGMKPEL 174
           S++ + VP ++  APV+GF AYDASNL +     L+FNV GDPISIKF   +TKG    L
Sbjct: 111 STLYYRVPDYSLVAPVVGFMAYDASNLSALGNEALKFNVLGDPISIKFPNLMTKGDPKLL 170

Query: 175 KCASLGLNGAVELYNMVHLSTCYVKTTGYFGVVIPVKLSVWDSVGGGRGLMVWLIACXXX 354
           KC  LG +G V   N+ + +TC  +  G+F V   VK S  D     R  + W+I     
Sbjct: 171 KCVELGPDGLVHFRNITNENTCMTQGDGHFSVA--VKNSDVDK--NNRVWIWWVIGFGAA 226

Query: 355 XXXXXXXXLVWMRVFRFARKEKMKEIE 435
                   ++    F+  R E+ +E+E
Sbjct: 227 ILALVLLGVIGFTTFKLVRSERFREME 253


>ref|XP_002276076.2| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis
           vinifera]
          Length = 722

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 56/151 (37%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
 Frame = +1

Query: 4   SSILFNVPGHTFAAPVIGFQAYDASNLRSKSTRELEFNVTGDPISIKF----ITKGMKPE 171
           SS  + VPG+T  + V+G  AYDASNL +    +L  N  G PIS+ F      +G K E
Sbjct: 545 SSYYYPVPGYTLVSSVVGLIAYDASNLDANRIVQLSLNTMGKPISVHFGKLLFPRGRKSE 604

Query: 172 LKCASLGLNGAVELYNMVHLSTCYVKTTGYFGVVIPV-KLSVWDS--VGGGRGLMVWLIA 342
            +CA+L  NG V L +M   S CY +  G+F +VIPV K   W S  VGG     V L+ 
Sbjct: 605 ARCAALCANGTVYLSDMSLPSVCYSREQGHFSIVIPVKKKQKWKSSWVGGFAVGFVGLVV 664

Query: 343 CXXXXXXXXXXXLVWMRVFRFARKEKMKEIE 435
                        V M V R ++++++ E+E
Sbjct: 665 MSS----------VGMVVLRLSKQKRIAEME 685


>ref|XP_002511953.1| conserved hypothetical protein [Ricinus communis]
           gi|223549133|gb|EEF50622.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   RSSILFNVPGHTFAAPVIGFQAYDASNLRSKSTRELEFNVTGDPISIKF---ITKGMKPE 171
           RSS  + VPG++  APV+GF AYDASNL       L+ ++ GD I +KF   + K   PE
Sbjct: 94  RSSHYYKVPGYSLVAPVVGFMAYDASNLSLLGREMLQLSIMGDSIVVKFSKIVRKDGNPE 153

Query: 172 -LKCASLGLNGAVELYNMVHLSTCYVKTTGYFGVVIP 279
            LKC  +G  G V+  N+   +TC  ++ G+F +V+P
Sbjct: 154 DLKCVKIGEGGTVQFRNVTEGNTCLAQSDGHFSLVVP 190


>ref|XP_002301392.1| predicted protein [Populus trichocarpa] gi|222843118|gb|EEE80665.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
 Frame = +1

Query: 4   SSILFNVPGHTFAAPVIGFQAYDASNLRSKSTRELEFNVTGDPISIKFIT---KGMKPEL 174
           S+  + VP ++  APV+GF AYDASNL +     L+F++ G PI I F     KG    L
Sbjct: 72  STRYYKVPDYSLVAPVVGFMAYDASNLSALGNEALKFSILGGPILISFPNLEIKGKLETL 131

Query: 175 KCASLGLNGAVELYNMVHLSTCYVKTTGYFGVVIP-------VKLSVWDSVGGGRGLMVW 333
           KC  LG +G V+  N+   +TC  +  G+F + +        +++  W  VG G G    
Sbjct: 132 KCVKLGPDGFVQFRNITKGNTCITQGDGHFSLAVQNPEVEKNIRVWKWYVVGFGAGFFAL 191

Query: 334 LIACXXXXXXXXXXXLVWMRVFRFARKEKMKEIE 435
           +++            ++    F+  R +K++ +E
Sbjct: 192 VLS-----------GVIGYTTFKLVRSKKLRGME 214


>gb|AFK48373.1| unknown [Lotus japonicus]
          Length = 204

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
 Frame = +1

Query: 4   SSILFNVPGHTFAAPVIGFQAYDASNLRSKSTRELEFNVTGDPISIKFITKGMKPELK-- 177
           SS  +NVP HT  APV GF+AY +S     ST +++  + GDPI+I+F   G  P  K  
Sbjct: 12  SSHYYNVPNHTMVAPVFGFRAYTSSEKALISTEKMDLIIEGDPITIQFHHVG--PHEKNN 69

Query: 178 ---CASLGLNGAVELYNMVHLSTCYVKTTGYFGVVI--PVKLSVWDSV----GGGRGLMV 330
              CA  G  G+VE  NM     C  +T G++ +V+  P K+ +   +       +G   
Sbjct: 70  SPICAKFGAGGSVEFNNMTKPYVCEAETPGHYTLVVKSPKKIHISPKIVHPQSQSKGFNT 129

Query: 331 -WLIACXXXXXXXXXXXLVWMRVFRFARKEKMKEIE 435
            W++             LV + + + A++ +++++E
Sbjct: 130 WWVLGFVIGSVGLVIFALVLIALVKEAKRRRIRKME 165


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