BLASTX nr result

ID: Dioscorea21_contig00011054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011054
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24436.3| unnamed protein product [Vitis vinifera]              308   1e-81
ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [V...   308   1e-81
ref|XP_002879073.1| GTP-binding family protein [Arabidopsis lyra...   296   3e-78
ref|XP_003539853.1| PREDICTED: large subunit GTPase 1 homolog [G...   296   4e-78
ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [C...   295   9e-78

>emb|CBI24436.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  308 bits (789), Expect = 1e-81
 Identities = 152/189 (80%), Positives = 166/189 (87%), Gaps = 1/189 (0%)
 Frame = +3

Query: 270 FVGYPNVGKSSTINALVGEKRAGVTSTPGKTKHFQTLIISDELILCDCPGLVFPSFSSSR 449
           FVGYPNVGKSSTINALVGEKR GVTSTPGKTKHFQTLIISDEL LCDCPGLVFPSFSSSR
Sbjct: 266 FVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISDELTLCDCPGLVFPSFSSSR 325

Query: 450 YEMIASGVLPVDRMTEHRQAIQVVADRVPRHALESIYNITLPKPKPYESQSRPPTSSELL 629
           YEMIASGVLP+DRMTEHR+A+QVVA+RVPRH +E +Y ITLPKPKPYE Q+RPP +SE L
Sbjct: 326 YEMIASGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITLPKPKPYEQQNRPPLASEFL 385

Query: 630 RAYCASRGHVGSSGLPDETRAARQILKDYIDGKLPHYEMPPDGESDDDNSLLVGVTPSF- 806
           RAYCASRG+V SSGLPDETRAARQILKDYIDGK+PH+EMPP G +D+ +       PSF 
Sbjct: 386 RAYCASRGYVASSGLPDETRAARQILKDYIDGKVPHFEMPP-GMTDEVSEFEDPAEPSFS 444

Query: 807 EDHESHISD 833
           E HES  SD
Sbjct: 445 ETHESDASD 453


>ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [Vitis vinifera]
          Length = 597

 Score =  308 bits (789), Expect = 1e-81
 Identities = 152/189 (80%), Positives = 166/189 (87%), Gaps = 1/189 (0%)
 Frame = +3

Query: 270 FVGYPNVGKSSTINALVGEKRAGVTSTPGKTKHFQTLIISDELILCDCPGLVFPSFSSSR 449
           FVGYPNVGKSSTINALVGEKR GVTSTPGKTKHFQTLIISDEL LCDCPGLVFPSFSSSR
Sbjct: 320 FVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISDELTLCDCPGLVFPSFSSSR 379

Query: 450 YEMIASGVLPVDRMTEHRQAIQVVADRVPRHALESIYNITLPKPKPYESQSRPPTSSELL 629
           YEMIASGVLP+DRMTEHR+A+QVVA+RVPRH +E +Y ITLPKPKPYE Q+RPP +SE L
Sbjct: 380 YEMIASGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITLPKPKPYEQQNRPPLASEFL 439

Query: 630 RAYCASRGHVGSSGLPDETRAARQILKDYIDGKLPHYEMPPDGESDDDNSLLVGVTPSF- 806
           RAYCASRG+V SSGLPDETRAARQILKDYIDGK+PH+EMPP G +D+ +       PSF 
Sbjct: 440 RAYCASRGYVASSGLPDETRAARQILKDYIDGKVPHFEMPP-GMTDEVSEFEDPAEPSFS 498

Query: 807 EDHESHISD 833
           E HES  SD
Sbjct: 499 ETHESDASD 507


>ref|XP_002879073.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324912|gb|EFH55332.1| GTP-binding family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 539

 Score =  296 bits (759), Expect = 3e-78
 Identities = 140/169 (82%), Positives = 157/169 (92%)
 Frame = +3

Query: 270 FVGYPNVGKSSTINALVGEKRAGVTSTPGKTKHFQTLIISDELILCDCPGLVFPSFSSSR 449
           FVGYPNVGKSSTINALVG+KR GVTSTPGKTKHFQTLIIS++L+LCDCPGLVFPSFSSSR
Sbjct: 309 FVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISEDLMLCDCPGLVFPSFSSSR 368

Query: 450 YEMIASGVLPVDRMTEHRQAIQVVADRVPRHALESIYNITLPKPKPYESQSRPPTSSELL 629
           YEMIASGVLP+DRMTEHR+AI+VVA+RVPRHA+E +YNI+LPKPK YE QSRPP +SELL
Sbjct: 369 YEMIASGVLPIDRMTEHREAIKVVAERVPRHAIEDVYNISLPKPKSYEPQSRPPLASELL 428

Query: 630 RAYCASRGHVGSSGLPDETRAARQILKDYIDGKLPHYEMPPDGESDDDN 776
           R YC SRG+V SSGLPDETRAARQILKDYI+GKLPH+ MPP+   DD+N
Sbjct: 429 RTYCLSRGYVASSGLPDETRAARQILKDYIEGKLPHFAMPPEITRDDEN 477


>ref|XP_003539853.1| PREDICTED: large subunit GTPase 1 homolog [Glycine max]
          Length = 598

 Score =  296 bits (758), Expect = 4e-78
 Identities = 143/171 (83%), Positives = 156/171 (91%)
 Frame = +3

Query: 270 FVGYPNVGKSSTINALVGEKRAGVTSTPGKTKHFQTLIISDELILCDCPGLVFPSFSSSR 449
           FVGYPNVGKSSTINALVG+KR GVTSTPGKTKHFQTLIISDEL LCDCPGLVFPSFSSSR
Sbjct: 319 FVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDELTLCDCPGLVFPSFSSSR 378

Query: 450 YEMIASGVLPVDRMTEHRQAIQVVADRVPRHALESIYNITLPKPKPYESQSRPPTSSELL 629
           YEMIA GVLP+DRMTE R+++QVVADRVPRH +E IY I LPKPK YESQSRPP +SELL
Sbjct: 379 YEMIACGVLPIDRMTEQRESVQVVADRVPRHVIEEIYKIRLPKPKSYESQSRPPLASELL 438

Query: 630 RAYCASRGHVGSSGLPDETRAARQILKDYIDGKLPHYEMPPDGESDDDNSL 782
           RAYC SRG+V SSGLPDETRAARQ+LKDYIDGKLPHY+MPP G SD++ +L
Sbjct: 439 RAYCTSRGYVASSGLPDETRAARQMLKDYIDGKLPHYQMPP-GASDEEQAL 488


>ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus]
          Length = 588

 Score =  295 bits (755), Expect = 9e-78
 Identities = 143/190 (75%), Positives = 164/190 (86%)
 Frame = +3

Query: 270 FVGYPNVGKSSTINALVGEKRAGVTSTPGKTKHFQTLIISDELILCDCPGLVFPSFSSSR 449
           FVGYPNVGKSSTINALVG+KRAGVTSTPGKTKHFQTLIISD+L LCDCPGLVFPSFSSSR
Sbjct: 313 FVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSFSSSR 372

Query: 450 YEMIASGVLPVDRMTEHRQAIQVVADRVPRHALESIYNITLPKPKPYESQSRPPTSSELL 629
           YEMIA GVLP+DRMTEHR+A+QVVA+RVPRH +E +Y ITLPKPKPYE QSRPP +SELL
Sbjct: 373 YEMIAYGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITLPKPKPYEPQSRPPLASELL 432

Query: 630 RAYCASRGHVGSSGLPDETRAARQILKDYIDGKLPHYEMPPDGESDDDNSLLVGVTPSFE 809
           +AYC SRG+V SSGLPDETRA+RQILKDY+DGK+PH+E+PP    +D   +      SFE
Sbjct: 433 KAYCVSRGYVASSGLPDETRASRQILKDYVDGKIPHHELPPGMLKED--HIQEEDARSFE 490

Query: 810 DHESHISDDN 839
             ++H SD +
Sbjct: 491 LSDTHDSDSD 500


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