BLASTX nr result

ID: Dioscorea21_contig00011052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011052
         (1206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26796.1| unknown [Picea sitchensis]                             307   3e-81
ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteo...   303   7e-80
ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subun...   301   2e-79
ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group] g...   301   2e-79
emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group] gi...   301   2e-79

>gb|ABK26796.1| unknown [Picea sitchensis]
          Length = 248

 Score =  307 bits (787), Expect = 3e-81
 Identities = 160/216 (74%), Positives = 176/216 (81%)
 Frame = -3

Query: 1084 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSK 905
            RSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIAD+TA+VVVAQLLFLESENP K
Sbjct: 33   RSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIADETASVVVAQLLFLESENPQK 92

Query: 904  PIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 725
            PI++YINSPGGVVTAGLAIYDTMQYI+SPV+T                            
Sbjct: 93   PINMYINSPGGVVTAGLAIYDTMQYIKSPVTT-----------LCIGQAASMGSLLLAAG 141

Query: 724  XXGERRALPNARVMTHQPSGGYSGTAADIAIHAREILKMRERLNGIYAKHCRQPIENVEK 545
              GERRALPNARVM HQPSGG SG A+DIAIHA+EILK RERLNG+YAKH  Q IE +E+
Sbjct: 142  SHGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKIEQ 201

Query: 544  NMDRDTFMSPEEAKEFGLIDEVIEHRPISLVSDAVS 437
             M+RDTFMSP+EAKEFGLIDEVIEHRPISLV+D+V+
Sbjct: 202  FMERDTFMSPDEAKEFGLIDEVIEHRPISLVTDSVT 237


>ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
            mitochondrial-like [Brachypodium distachyon]
          Length = 300

 Score =  303 bits (775), Expect = 7e-80
 Identities = 170/267 (63%), Positives = 190/267 (71%), Gaps = 18/267 (6%)
 Frame = -3

Query: 1147 SAAAMWRCSRLAGAFRPSV-----------SARSYGLIPMVIEHTSRGERAYDIFSRLLK 1001
            +AAAM R  RLA A  P             + R YGL+PMVIEHTSRGERAYDIFSRLLK
Sbjct: 43   AAAAMLR--RLASAAAPRAFFSSSPPAGYTARREYGLVPMVIEHTSRGERAYDIFSRLLK 100

Query: 1000 ERIICINGPIADDTAAVVVAQLLFLESENPSKPIHLYINSPGGVVTAGLAIYDTMQYIRS 821
            ERI+CI+GPIADDTA++VVAQLLFLESENP+KPIHLYINSPGGVVTAGLAIYDTMQYIRS
Sbjct: 101  ERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYINSPGGVVTAGLAIYDTMQYIRS 160

Query: 820  PVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGERRALPNARVMTHQPSGGYSGTAAD 641
            PV+T                              GERRALPNARVM HQPSGG SG A+D
Sbjct: 161  PVTT-----------LCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGASGQASD 209

Query: 640  IAIHAREILKMRERLNGIYAKHCRQPIENVEKNMDRDTFMSPEEAKEFGLIDEVIEHRPI 461
            IAIHA+EILK+R+RLN IYAKH  Q IE++EK M+RD FM P EA  +GLIDEVIEHRP+
Sbjct: 210  IAIHAKEILKVRDRLNKIYAKHTGQAIESIEKCMERDMFMDPVEAHSWGLIDEVIEHRPV 269

Query: 460  SLVSDAVS-------GGGNDESKAKGE 401
            SLVSDAV+       G G  E+K   E
Sbjct: 270  SLVSDAVASDPPSTGGAGGGENKGTEE 296


>ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
            gi|194700894|gb|ACF84531.1| unknown [Zea mays]
            gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease
            proteolytic subunit [Zea mays]
            gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease
            proteolytic subunit isoform 1 [Zea mays]
            gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease
            proteolytic subunit isoform 2 [Zea mays]
          Length = 260

 Score =  301 bits (771), Expect = 2e-79
 Identities = 158/238 (66%), Positives = 179/238 (75%), Gaps = 7/238 (2%)
 Frame = -3

Query: 1093 VSARSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESEN 914
            +  R YGL+PMVIEHTSRGERAYDIFSRLLKERI+CI+GPI DDTA++VVAQLLFLESEN
Sbjct: 30   IPRREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESEN 89

Query: 913  PSKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTXXXXXXXXXXXXXXXXXXXXXXXXX 734
            P+KP+HLYINSPGGVVTAGLAIYDTMQYIRSPV+T                         
Sbjct: 90   PAKPVHLYINSPGGVVTAGLAIYDTMQYIRSPVTT-----------LCIGQAASMASLLL 138

Query: 733  XXXXXGERRALPNARVMTHQPSGGYSGTAADIAIHAREILKMRERLNGIYAKHCRQPIEN 554
                 GERRALPNARVM HQPSGG SG A+DIAIHA+EILK+R+RLN IYAKH  Q I+ 
Sbjct: 139  AAGASGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDR 198

Query: 553  VEKNMDRDTFMSPEEAKEFGLIDEVIEHRPISLVSDAV-------SGGGNDESKAKGE 401
            +E+ M+RD FM PEEA E+GLIDEVIEHRP+SLVSDAV        GGG + +K   E
Sbjct: 199  IEQCMERDMFMDPEEAHEWGLIDEVIEHRPVSLVSDAVGSDPPNLGGGGTEVNKGTDE 256


>ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group]
            gi|113564929|dbj|BAF15272.1| Os04g0525600 [Oryza sativa
            Japonica Group] gi|215768496|dbj|BAH00725.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 309

 Score =  301 bits (771), Expect = 2e-79
 Identities = 158/235 (67%), Positives = 179/235 (76%), Gaps = 7/235 (2%)
 Frame = -3

Query: 1084 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSK 905
            R YGL+PMVIEHTSRGERAYDIFSRLLKERI+CI+GPI DDTA++VVAQLLFLESENP+K
Sbjct: 82   REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 141

Query: 904  PIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 725
            P+HLYINSPGGVVTAGLAIYDTMQYIRSPV+T                            
Sbjct: 142  PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTT-----------LCIGQAASMASLLLAAG 190

Query: 724  XXGERRALPNARVMTHQPSGGYSGTAADIAIHAREILKMRERLNGIYAKHCRQPIENVEK 545
              GERRALPNARVM HQPSGG SG A+DIAIHA+EILK+R+RLN IYAKH  Q I+ +E+
Sbjct: 191  ARGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQ 250

Query: 544  NMDRDTFMSPEEAKEFGLIDEVIEHRPISLVSDAV-------SGGGNDESKAKGE 401
             M+RD FM PEEA ++GLIDEVIEHRP+SLVSDAV        GGG+  +KA  E
Sbjct: 251  CMERDMFMDPEEAHDWGLIDEVIEHRPVSLVSDAVGSDLPNLGGGGDGANKATDE 305


>emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group]
            gi|116310954|emb|CAH67891.1|
            OSIGBa0153E02-OSIGBa0093I20.20 [Oryza sativa Indica
            Group] gi|125549084|gb|EAY94906.1| hypothetical protein
            OsI_16707 [Oryza sativa Indica Group]
          Length = 259

 Score =  301 bits (771), Expect = 2e-79
 Identities = 158/235 (67%), Positives = 179/235 (76%), Gaps = 7/235 (2%)
 Frame = -3

Query: 1084 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIADDTAAVVVAQLLFLESENPSK 905
            R YGL+PMVIEHTSRGERAYDIFSRLLKERI+CI+GPI DDTA++VVAQLLFLESENP+K
Sbjct: 32   REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 91

Query: 904  PIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 725
            P+HLYINSPGGVVTAGLAIYDTMQYIRSPV+T                            
Sbjct: 92   PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTT-----------LCIGQAASMASLLLAAG 140

Query: 724  XXGERRALPNARVMTHQPSGGYSGTAADIAIHAREILKMRERLNGIYAKHCRQPIENVEK 545
              GERRALPNARVM HQPSGG SG A+DIAIHA+EILK+R+RLN IYAKH  Q I+ +E+
Sbjct: 141  ARGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQ 200

Query: 544  NMDRDTFMSPEEAKEFGLIDEVIEHRPISLVSDAV-------SGGGNDESKAKGE 401
             M+RD FM PEEA ++GLIDEVIEHRP+SLVSDAV        GGG+  +KA  E
Sbjct: 201  CMERDMFMDPEEAHDWGLIDEVIEHRPVSLVSDAVGSDLPNLGGGGDGANKATDE 255


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