BLASTX nr result

ID: Dioscorea21_contig00011025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011025
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK05070.1| predicted protein [Hordeum vulgare subsp. vulgare]    100   5e-19
emb|CAH66426.1| H0622F05.9 [Oryza sativa Indica Group] gi|116310...   100   9e-19
sp|Q7XTF8.1|COPT6_ORYSJ RecName: Full=Copper transporter 6; Shor...    96   2e-17
ref|NP_001173929.1| Os04g0415600 [Oryza sativa Japonica Group] g...    96   2e-17
ref|XP_002313411.1| copper transporter [Populus trichocarpa] gi|...    95   3e-17

>dbj|BAK05070.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 159

 Score =  100 bits (250), Expect = 5e-19
 Identities = 54/108 (50%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
 Frame = -3

Query: 391 TFFWGKRVQILFTGWPGDQGIGMYXXXXXXXXXXXXXXXXXXXXSRRMARPNASSMSITG 212
           TFFW  RV +LF GWPG++G GMY                    SRR+AR        T 
Sbjct: 41  TFFWSDRVVVLFPGWPGERGAGMYLLCLLLVLALAALTEALALLSRRLARRGEDGGPATA 100

Query: 211 LS---LTVLHALRIGLAYLVMLAVMSFNVGVLIAAIVGHALGFFFTGS 77
            S   LT +HA R+G+AYLVMLAVMSFNVGVL+AA+ GHA+GF F  S
Sbjct: 101 ASAALLTAVHAARMGMAYLVMLAVMSFNVGVLLAAVAGHAVGFLFARS 148


>emb|CAH66426.1| H0622F05.9 [Oryza sativa Indica Group] gi|116310799|emb|CAH67589.1|
           OSIGBa0092M08.1 [Oryza sativa Indica Group]
          Length = 184

 Score =  100 bits (248), Expect = 9e-19
 Identities = 61/141 (43%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
 Frame = -3

Query: 391 TFFWGKRVQILFTGWPGDQGIGMYXXXXXXXXXXXXXXXXXXXXSRRMARPNASSMSITG 212
           TFFW  R  +LF GWPG++G GMY                    SRR+AR  A++ S  G
Sbjct: 41  TFFWSDRAVVLFRGWPGERGAGMYALCLLFVLALAALTEGLSVLSRRLARRGAAAASSDG 100

Query: 211 -----------LSLTVLHALRIGLAYLVMLAVMSFNVGVLIAAIVGHALGFFFTGSGLFK 65
                        LT +HA R+G+AYLVMLAVMSFNVGVL+AA+ GHALGF    S +  
Sbjct: 101 GRPAPAPASSAALLTAVHAARMGMAYLVMLAVMSFNVGVLLAAVAGHALGFLLARSRV-- 158

Query: 64  WSRPTVDPAGGDAFPVAEPGG 2
             RP     GG      E GG
Sbjct: 159 --RPAARDGGGGV--ACEHGG 175


>sp|Q7XTF8.1|COPT6_ORYSJ RecName: Full=Copper transporter 6; Short=OsCOPT6
           gi|32479733|emb|CAE01520.1| OJ991214_12.9 [Oryza sativa
           Japonica Group] gi|331704076|gb|AED89993.1| COPT4 [Oryza
           sativa Japonica Group]
          Length = 184

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 59/141 (41%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
 Frame = -3

Query: 391 TFFWGKRVQILFTGWPGDQGIGMYXXXXXXXXXXXXXXXXXXXXSRRMARPNASSMSITG 212
           TFFW  R  +L  GWPG++G GMY                    SRR+AR    + S  G
Sbjct: 41  TFFWSDRAVVLIRGWPGERGAGMYALCLLFVLALAALTEGLSVLSRRLARRGGGAASSDG 100

Query: 211 -----------LSLTVLHALRIGLAYLVMLAVMSFNVGVLIAAIVGHALGFFFTGSGLFK 65
                        LT +HA R+G+AYLVMLAVMSFNVGVL+AA+ GHALGF    S +  
Sbjct: 101 GRPAPAPASSAALLTAVHAARMGMAYLVMLAVMSFNVGVLLAAVAGHALGFLLARSRV-- 158

Query: 64  WSRPTVDPAGGDAFPVAEPGG 2
             RP     GG      E GG
Sbjct: 159 --RPAARDGGGGV--ACEHGG 175


>ref|NP_001173929.1| Os04g0415600 [Oryza sativa Japonica Group]
           gi|255675445|dbj|BAH92657.1| Os04g0415600 [Oryza sativa
           Japonica Group]
          Length = 331

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 56/131 (42%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
 Frame = -3

Query: 391 TFFWGKRVQILFTGWPGDQGIGMYXXXXXXXXXXXXXXXXXXXXSRRMARPNASSMSITG 212
           TFFW  R  +L  GWPG++G GMY                    SRR+AR    + S  G
Sbjct: 41  TFFWSDRAVVLIRGWPGERGAGMYALCLLFVLALAALTEGLSVLSRRLARRGGGAASSDG 100

Query: 211 -----------LSLTVLHALRIGLAYLVMLAVMSFNVGVLIAAIVGHALGFFFTGSGLFK 65
                        LT +HA R+G+AYLVMLAVMSFNVGVL+AA+ GHALGF    S +  
Sbjct: 101 GRPAPAPASSAALLTAVHAARMGMAYLVMLAVMSFNVGVLLAAVAGHALGFLLARSRV-- 158

Query: 64  WSRPTVDPAGG 32
             RP     GG
Sbjct: 159 --RPAARDGGG 167


>ref|XP_002313411.1| copper transporter [Populus trichocarpa]
           gi|118485983|gb|ABK94836.1| unknown [Populus
           trichocarpa] gi|222849819|gb|EEE87366.1| copper
           transporter [Populus trichocarpa]
          Length = 162

 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 48/109 (44%), Positives = 65/109 (59%)
 Frame = -3

Query: 391 TFFWGKRVQILFTGWPGDQGIGMYXXXXXXXXXXXXXXXXXXXXSRRMARPNASSMSITG 212
           TFFWGK  +ILF+GWPG      +                      ++ +P ++ ++  G
Sbjct: 39  TFFWGKSTEILFSGWPGSSDKRPHMYFVALLFVFVLSILVEWLSHCQLMKPGSNHVA-AG 97

Query: 211 LSLTVLHALRIGLAYLVMLAVMSFNVGVLIAAIVGHALGFFFTGSGLFK 65
           L  T+LHALR+GLAY+VMLA+MSFN GV +AA+ GH LGF F GS +FK
Sbjct: 98  LVQTLLHALRVGLAYMVMLAIMSFNGGVFLAAVAGHTLGFLFFGSRVFK 146


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