BLASTX nr result

ID: Dioscorea21_contig00011024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011024
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538616.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   101   2e-38
ref|NP_001159183.1| uncharacterized protein LOC100304268 [Zea ma...    96   4e-38
tpg|DAA37520.1| TPA: putative ubiquitin carboxyl-terminal hydrol...    96   4e-38
ref|NP_001236383.1| uncharacterized protein LOC100305765 [Glycin...   100   5e-38
ref|XP_002531269.1| Ubiquitin carboxyl-terminal hydrolase, putat...    99   9e-38

>ref|XP_003538616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Glycine
           max]
          Length = 369

 Score =  101 bits (251), Expect(2) = 2e-38
 Identities = 49/52 (94%), Positives = 49/52 (94%)
 Frame = -2

Query: 158 CNSVLQALYFCVPFREQLLEYYANNKKQADIEENLLTCLADLFSQISSQKKK 3
           CNSVLQALYFCVPFREQLLEYYANNK  AD EENLLTCLADLFSQISSQKKK
Sbjct: 34  CNSVLQALYFCVPFREQLLEYYANNKSIADAEENLLTCLADLFSQISSQKKK 85



 Score = 83.2 bits (204), Expect(2) = 2e-38
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = -1

Query: 357 MGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL 244
           MGA+GSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL 38


>ref|NP_001159183.1| uncharacterized protein LOC100304268 [Zea mays]
           gi|195627604|gb|ACG35632.1| ubiquitin carboxyl-terminal
           hydrolase 4 [Zea mays] gi|223942511|gb|ACN25339.1|
           unknown [Zea mays] gi|414586948|tpg|DAA37519.1| TPA:
           putative ubiquitin carboxyl-terminal hydrolase
           superfamily protein [Zea mays]
          Length = 368

 Score = 95.5 bits (236), Expect(2) = 4e-38
 Identities = 44/52 (84%), Positives = 46/52 (88%)
 Frame = -2

Query: 158 CNSVLQALYFCVPFREQLLEYYANNKKQADIEENLLTCLADLFSQISSQKKK 3
           CNSVLQALYFC+PFREQLLEYYANNK   D+EENLLTCLADLF QIS  KKK
Sbjct: 36  CNSVLQALYFCIPFREQLLEYYANNKTPGDVEENLLTCLADLFMQISQAKKK 87



 Score = 87.8 bits (216), Expect(2) = 4e-38
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = -1

Query: 363 MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL 244
           MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL
Sbjct: 1   MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL 40


>tpg|DAA37520.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
           protein [Zea mays]
          Length = 239

 Score = 95.5 bits (236), Expect(2) = 4e-38
 Identities = 44/52 (84%), Positives = 46/52 (88%)
 Frame = -2

Query: 158 CNSVLQALYFCVPFREQLLEYYANNKKQADIEENLLTCLADLFSQISSQKKK 3
           CNSVLQALYFC+PFREQLLEYYANNK   D+EENLLTCLADLF QIS  KKK
Sbjct: 36  CNSVLQALYFCIPFREQLLEYYANNKTPGDVEENLLTCLADLFMQISQAKKK 87



 Score = 87.8 bits (216), Expect(2) = 4e-38
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = -1

Query: 363 MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL 244
           MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL
Sbjct: 1   MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL 40


>ref|NP_001236383.1| uncharacterized protein LOC100305765 [Glycine max]
           gi|255626553|gb|ACU13621.1| unknown [Glycine max]
          Length = 155

 Score = 99.8 bits (247), Expect(2) = 5e-38
 Identities = 48/52 (92%), Positives = 48/52 (92%)
 Frame = -2

Query: 158 CNSVLQALYFCVPFREQLLEYYANNKKQADIEENLLTCLADLFSQISSQKKK 3
           CNSVLQALYFCVPFREQLLEYYANNK   D EENLLTCLADLFSQISSQKKK
Sbjct: 34  CNSVLQALYFCVPFREQLLEYYANNKSITDAEENLLTCLADLFSQISSQKKK 85



 Score = 83.2 bits (204), Expect(2) = 5e-38
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = -1

Query: 357 MGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL 244
           MGA+GSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL 38


>ref|XP_002531269.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223529154|gb|EEF31133.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 369

 Score = 99.0 bits (245), Expect(2) = 9e-38
 Identities = 47/52 (90%), Positives = 48/52 (92%)
 Frame = -2

Query: 158 CNSVLQALYFCVPFREQLLEYYANNKKQADIEENLLTCLADLFSQISSQKKK 3
           CNSVLQALYFCVPFREQLLEYYANNK   D EENLLTCLADLF+QISSQKKK
Sbjct: 34  CNSVLQALYFCVPFREQLLEYYANNKSGGDAEENLLTCLADLFTQISSQKKK 85



 Score = 83.2 bits (204), Expect(2) = 9e-38
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = -1

Query: 357 MGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL 244
           MGA+GSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVL 38


Top