BLASTX nr result

ID: Dioscorea21_contig00011004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011004
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42758.1| unknown [Lotus japonicus]                              161   5e-38
ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [V...   161   5e-38
ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis ...   161   5e-38
ref|XP_002519537.1| 60S ribosomal protein L12, putative [Ricinus...   160   1e-37
ref|XP_002338297.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>gb|AFK42758.1| unknown [Lotus japonicus]
          Length = 100

 Score =  161 bits (408), Expect = 5e-38
 Identities = 83/84 (98%), Positives = 84/84 (100%)
 Frame = +3

Query: 3   KFDPTQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 182
           KFDP+QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL
Sbjct: 4   KFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 63

Query: 183 TVQNRQAKVSVVPSAAALVIKALK 254
           TVQNRQAKVSVVPSAAALVIKALK
Sbjct: 64  TVQNRQAKVSVVPSAAALVIKALK 87


>ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [Vitis vinifera]
          Length = 166

 Score =  161 bits (408), Expect = 5e-38
 Identities = 83/84 (98%), Positives = 84/84 (100%)
 Frame = +3

Query: 3   KFDPTQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 182
           KFDP+QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL
Sbjct: 4   KFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 63

Query: 183 TVQNRQAKVSVVPSAAALVIKALK 254
           TVQNRQAKVSVVPSAAALVIKALK
Sbjct: 64  TVQNRQAKVSVVPSAAALVIKALK 87


>ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera]
           gi|147835636|emb|CAN66258.1| hypothetical protein
           VITISV_001237 [Vitis vinifera]
          Length = 166

 Score =  161 bits (408), Expect = 5e-38
 Identities = 83/84 (98%), Positives = 84/84 (100%)
 Frame = +3

Query: 3   KFDPTQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 182
           KFDP+QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL
Sbjct: 4   KFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 63

Query: 183 TVQNRQAKVSVVPSAAALVIKALK 254
           TVQNRQAKVSVVPSAAALVIKALK
Sbjct: 64  TVQNRQAKVSVVPSAAALVIKALK 87


>ref|XP_002519537.1| 60S ribosomal protein L12, putative [Ricinus communis]
           gi|223541400|gb|EEF42951.1| 60S ribosomal protein L12,
           putative [Ricinus communis]
          Length = 166

 Score =  160 bits (405), Expect = 1e-37
 Identities = 82/84 (97%), Positives = 84/84 (100%)
 Frame = +3

Query: 3   KFDPTQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 182
           KFDP+QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL
Sbjct: 4   KFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 63

Query: 183 TVQNRQAKVSVVPSAAALVIKALK 254
           TVQNRQAKV+VVPSAAALVIKALK
Sbjct: 64  TVQNRQAKVTVVPSAAALVIKALK 87


>ref|XP_002338297.1| predicted protein [Populus trichocarpa] gi|222871818|gb|EEF08949.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  160 bits (405), Expect = 1e-37
 Identities = 82/84 (97%), Positives = 84/84 (100%)
 Frame = +3

Query: 3   KFDPTQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 182
           KFDP+QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL
Sbjct: 4   KFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 63

Query: 183 TVQNRQAKVSVVPSAAALVIKALK 254
           TVQNRQAKV+VVPSAAALVIKALK
Sbjct: 64  TVQNRQAKVTVVPSAAALVIKALK 87


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