BLASTX nr result

ID: Dioscorea21_contig00010761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010761
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   175   2e-41
ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   170   5e-40
ref|NP_001241941.1| uncharacterized protein LOC100790543 [Glycin...   167   2e-39
ref|XP_002330953.1| predicted protein [Populus trichocarpa] gi|2...   166   9e-39
ref|XP_004141476.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   162   8e-38

>ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Vitis vinifera]
           gi|298204451|emb|CBI16931.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  175 bits (443), Expect = 2e-41
 Identities = 103/227 (45%), Positives = 127/227 (55%), Gaps = 4/227 (1%)
 Frame = -3

Query: 817 MGALLCCFRVREAPE--QRESPVRRRICSPLNSFVQPFRNGYISLFQRGDVHVVPLPV-G 647
           MG++ CC RV +  +     S + R  C  L+ FVQ F N Y SLF+RG+V+ +P  + G
Sbjct: 1   MGSVCCCLRVEDFDDYVNPNSSIYRN-CMCLSCFVQNFLNVYTSLFRRGEVNSIPSSIQG 59

Query: 646 RASPSAFTSRDADYSAIDSFHPPPRPLAFD-DPRFSAHHDDVXXXXXXXXXXXSHEDTQS 470
            AS S+ TS D   S  D +  PPRPL +D DPR      D            SHE+++ 
Sbjct: 60  AASLSSTTSLDDSLS--DMYRSPPRPLPYDVDPRNFRLQRDGLVSRREKGSSHSHEESEP 117

Query: 469 LRGCCDEPCSETWTEVKTDGSKCGVKLYCSDLPQKRSPEKKISGSAYYFCPTEDEDVCPT 290
           LR   D       T  K + S  G K        K S  K   G  + +  +EDEDVCPT
Sbjct: 118 LRSDTDGDSESLITRDKWNESDDGSKEQRPRSSVKHSMAKTTMGLGFIYSSSEDEDVCPT 177

Query: 289 CLEEYTPENPKITLQCSHDFHLSCIYEWMERSEACPICGKIMMFVET 149
           CLEEYTPENPKI  +CSH FHL CIYEWMERSE CP+CGK+MMF ET
Sbjct: 178 CLEEYTPENPKIMTKCSHHFHLGCIYEWMERSETCPVCGKVMMFDET 224


>ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
          Length = 227

 Score =  170 bits (430), Expect = 5e-40
 Identities = 96/231 (41%), Positives = 127/231 (54%), Gaps = 8/231 (3%)
 Frame = -3

Query: 817 MGALLCCFRVREAPEQRE--SPVRRRICSPLNSFVQPFRNGYISLFQRGDVHVVPLPVGR 644
           MGA+ CCF V +  +     S V R  C  L+ FVQ F   Y S+F+RG+VH +P  +  
Sbjct: 1   MGAVCCCFNVDDFEDYMNPNSSVYRN-CMCLSCFVQNFLTVYESIFRRGEVHAIPSSIQG 59

Query: 643 ASPSAFTSRDADYSAIDSFHPPPRPLAFD-DPRFSAHHDDVXXXXXXXXXXXSHEDTQSL 467
           A+    T+   D S  D +  PPRPL +D DPRF     +             +E+++ L
Sbjct: 60  AASMTSTA-SLDNSLSDMYRSPPRPLPYDADPRFFRSQREGLVSRREKGSSHLNEESEPL 118

Query: 466 RGCCDEPCSET-----WTEVKTDGSKCGVKLYCSDLPQKRSPEKKISGSAYYFCPTEDED 302
           RG  D           W +   DGSK     Y S    + S  K  +G+   +  +E+ED
Sbjct: 119 RGDVDADSESLNSGGKWNDTSEDGSK----EYRSKSSVRLSSAKLTTGAGVVYSSSEEED 174

Query: 301 VCPTCLEEYTPENPKITLQCSHDFHLSCIYEWMERSEACPICGKIMMFVET 149
           VCPTCLEEYT ENPKI  +CSH FHL CIYEWMERS++CP+CGK+M+F ET
Sbjct: 175 VCPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDET 225


>ref|NP_001241941.1| uncharacterized protein LOC100790543 [Glycine max]
           gi|255641258|gb|ACU20906.1| unknown [Glycine max]
          Length = 226

 Score =  167 bits (424), Expect = 2e-39
 Identities = 94/230 (40%), Positives = 124/230 (53%), Gaps = 7/230 (3%)
 Frame = -3

Query: 817 MGALLCCFRVREAPE--QRESPVRRRICSPLNSFVQPFRNGYISLFQRGDVHVVPLPVGR 644
           MGA+ CCF V +  +     S V R  C  L+ FVQ F   Y S+F+RG+VH +P  +  
Sbjct: 1   MGAVCCCFNVDDFEDFMNPNSSVYRN-CMCLSCFVQNFFTMYESIFRRGEVHAIPSSIQG 59

Query: 643 ASPSAFTSRDADYSAIDSFHPPPRPLAFDDPRFSAHHDDVXXXXXXXXXXXSHEDTQSLR 464
           A+    T+   D S  D +  PPRPL +D  RF     D             +E+++ LR
Sbjct: 60  AASMTSTA-SLDNSLSDMYRSPPRPLPYDADRFFRSQRDGLVSRREKGSSHLNEESEPLR 118

Query: 463 GCCDEPCSET-----WTEVKTDGSKCGVKLYCSDLPQKRSPEKKISGSAYYFCPTEDEDV 299
           G  D           W +   DGSK     Y S    + S  K  +G+   +  +E+EDV
Sbjct: 119 GDVDADSESLNSAGKWNDTSEDGSK----EYRSKSTVRLSSAKLTTGAGVVYSSSEEEDV 174

Query: 298 CPTCLEEYTPENPKITLQCSHDFHLSCIYEWMERSEACPICGKIMMFVET 149
           CPTCLEEYT ENPKI  +CSH FHL CIYEWMER ++CP+CGK+M+F ET
Sbjct: 175 CPTCLEEYTEENPKIVTKCSHHFHLCCIYEWMERGDSCPVCGKVMVFDET 224


>ref|XP_002330953.1| predicted protein [Populus trichocarpa] gi|222873147|gb|EEF10278.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  166 bits (419), Expect = 9e-39
 Identities = 98/230 (42%), Positives = 126/230 (54%), Gaps = 7/230 (3%)
 Frame = -3

Query: 817 MGALLCCFRVREA-----PEQRESPVRRRICSPLNSFVQPFRNGYISLFQRGDVHVVPLP 653
           MG++ CC  V +      PE  E     R C  L+ FVQ F + Y S+F+RG VH VP  
Sbjct: 1   MGSVCCCLHVDDFEDYMNPENSEY----RNCLCLSCFVQNFLHVYTSIFRRGQVHSVPSS 56

Query: 652 VGRASPSAFTSRDADYSAIDSFHPPPRPLAFD-DPRFSAHHDDVXXXXXXXXXXXSHEDT 476
           +  A+  + TS   D S  + +  PPRPL +D DPR      D            SHE++
Sbjct: 57  IQGAA--SLTSSSLDNSLAEMYRSPPRPLPYDADPRCLRLQRDGLVSRREKGSSHSHEES 114

Query: 475 QSLRGCCDEPCSETWTEVKTDGSKC-GVKLYCSDLPQKRSPEKKISGSAYYFCPTEDEDV 299
           + LR   D       T  K + S C G K   S    K S  K   G  Y +  +E+EDV
Sbjct: 115 EPLRSDNDADSESFRTGDKWNASACEGGKEQHSRSSLKLSSAKATVGIGYVYSSSEEEDV 174

Query: 298 CPTCLEEYTPENPKITLQCSHDFHLSCIYEWMERSEACPICGKIMMFVET 149
           CPTCL+EYTPE+PKI  +CSH FHL CIYEWMERS++CP+CGK+M+F ET
Sbjct: 175 CPTCLDEYTPEDPKIMTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDET 224


>ref|XP_004141476.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
           sativus]
          Length = 227

 Score =  162 bits (411), Expect = 8e-38
 Identities = 94/228 (41%), Positives = 121/228 (53%), Gaps = 5/228 (2%)
 Frame = -3

Query: 817 MGALLCCFRVREAPE--QRESPVRRRICSPLNSFVQPFRNGYISLFQRGDVHVVPLPVGR 644
           MGA+ CC  V +  +     S V R  C+ L+ F+Q F N Y  +F+RG+VH V   +  
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRN-CTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQG 59

Query: 643 ASPSAFTSRDADYSAIDSFHPPPRPLAFD-DPRFSAHHDDVXXXXXXXXXXXSHEDTQSL 467
           A+ S  ++   D S  + +  PPRPL +D DPR+     D             HE+++ L
Sbjct: 60  AT-SMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPL 118

Query: 466 RGCCDEPCSETWTEVKTDGSKC--GVKLYCSDLPQKRSPEKKISGSAYYFCPTEDEDVCP 293
           R   D       +  K +GS C    K        K    K  SG  Y +  +EDEDVCP
Sbjct: 119 RSEVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCP 178

Query: 292 TCLEEYTPENPKITLQCSHDFHLSCIYEWMERSEACPICGKIMMFVET 149
           TCLEEYT ENPKI  +CSH FHL CIYEWMERS+ CP+CGK M F ET
Sbjct: 179 TCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDET 226


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