BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010753
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]                   352   2e-94
ref|NP_001106061.1| CRM family member 3 [Zea mays] gi|156789080|...   352   2e-94
ref|XP_003577404.1| PREDICTED: chloroplastic group IIA intron sp...   346   8e-93
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   345   2e-92
ref|XP_002451033.1| hypothetical protein SORBIDRAFT_05g022980 [S...   340   7e-91

>tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
          Length = 1523

 Score =  352 bits (902), Expect = 2e-94
 Identities = 210/463 (45%), Positives = 263/463 (56%), Gaps = 20/463 (4%)
 Frame = -2

Query: 1398 LNPSTTSPWIHGWSSTHPYLRPFPKKPRDSIDYSNDDAFSSDDDE---VXXXXXXXXXXX 1228
            L+ S   PW++ WS  HP  R   + P  ++D   + + SSD D+   V           
Sbjct: 704  LSTSAPHPWLYSWS--HPRQRGRLRAPPAALDLRPEPSPSSDSDDEDAVGASRSSGRSTM 761

Query: 1227 XRILNKLQKLGLIEVSNSVNGSHPFSPEKGSVEDIFHAEDGVLPNPRGGLSLDFSEEVL- 1051
              IL++L++ G          + P  P +GSVED+F A+DGVLPN RGG   D  E  L 
Sbjct: 762  SLILSRLRRAGYS--GEDPRAAAPPHPPRGSVEDVFRADDGVLPNARGGFDADDEERALG 819

Query: 1050 -------RFLPGMLGVRKEEKKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL----TRE 904
                   R +P      +  + P                                  TRE
Sbjct: 820  DARFPWERPMPPPEAAPRSARSPTWMAELTLPAAELRRLRHAAIRIKSRTKVGGAGVTRE 879

Query: 903  VVDVIHRRWRSEEVVRLKCEGPAALNMRIMHENLERRTGGMVIWRSGTSILLYRGAGYGF 724
            +V+ I  +W++EEVVR+K  G  ALNMR+ HE LER+TGG+VIWRSGTS+ LYRG  Y  
Sbjct: 880  IVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVDYDE 939

Query: 723  PLIVKENVLNQSSQCSEFLKTVSCMSRRDPLE---DTEDCNMQPPAERKKDAGTV--PEN 559
            P   K++  N  S   +F    S      P E      D N+   +   K+   V  PE 
Sbjct: 940  PEPTKKSKKNSQSLAMDFPIKGSSNPSLLPTETANSVRDSNVALVSNAAKEELVVQAPEI 999

Query: 558  KSQIEIEKLLDNLGPRYTDWPGSDPSPIDADLLAGTVPGYKPPFRVLPYGVKSSLGPKEG 379
            K + EI+KLLD LGPRYTDWPGSDP P+DADLL   +PGYKPPFRVLPYGV+ SL  ++ 
Sbjct: 1000 KYEDEIDKLLDELGPRYTDWPGSDPLPVDADLLPANMPGYKPPFRVLPYGVRPSLSRRDT 1059

Query: 378  TTXXXXXXXLPPHFALGRNRQYQGLAAAMLVLWEKCPIAKIALKHGVQLKTSERMAEDIK 199
            T        LPPHFALGR+RQ QGLA AM+ LWEK  IAKIALK GVQL TSERMAEDIK
Sbjct: 1060 TNLRRLARGLPPHFALGRSRQLQGLANAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIK 1119

Query: 198  KMTGGTLLSRNKHYLVFYRGKSFLSLEVAEMLLEWERSAKALE 70
            K+TGG +LSRN  ++VFYRGK FLS E+AE+LLE ER AK+L+
Sbjct: 1120 KLTGGVMLSRNNEFIVFYRGKDFLSSELAEVLLERERLAKSLQ 1162


>ref|NP_001106061.1| CRM family member 3 [Zea mays] gi|156789080|gb|ABU96081.1| CRM family
            member 3 [Zea mays]
          Length = 842

 Score =  352 bits (902), Expect = 2e-94
 Identities = 210/463 (45%), Positives = 263/463 (56%), Gaps = 20/463 (4%)
 Frame = -2

Query: 1398 LNPSTTSPWIHGWSSTHPYLRPFPKKPRDSIDYSNDDAFSSDDDE---VXXXXXXXXXXX 1228
            L+ S   PW++ WS  HP  R   + P  ++D   + + SSD D+   V           
Sbjct: 23   LSTSAPHPWLYSWS--HPRQRGRLRAPPAALDLRPEPSPSSDSDDEDAVGASRSSGRSTM 80

Query: 1227 XRILNKLQKLGLIEVSNSVNGSHPFSPEKGSVEDIFHAEDGVLPNPRGGLSLDFSEEVL- 1051
              IL++L++ G          + P  P +GSVED+F A+DGVLPN RGG   D  E  L 
Sbjct: 81   SLILSRLRRAGYS--GEDPRAAAPPHPPRGSVEDVFRADDGVLPNARGGFDADDEERALG 138

Query: 1050 -------RFLPGMLGVRKEEKKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL----TRE 904
                   R +P      +  + P                                  TRE
Sbjct: 139  DARFPWERPMPPPEAAPRSARSPTWMAELTLPAAELRRLRHAAIRIKSRTKVGGAGVTRE 198

Query: 903  VVDVIHRRWRSEEVVRLKCEGPAALNMRIMHENLERRTGGMVIWRSGTSILLYRGAGYGF 724
            +V+ I  +W++EEVVR+K  G  ALNMR+ HE LER+TGG+VIWRSGTS+ LYRG  Y  
Sbjct: 199  IVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVDYDE 258

Query: 723  PLIVKENVLNQSSQCSEFLKTVSCMSRRDPLE---DTEDCNMQPPAERKKDAGTV--PEN 559
            P   K++  N  S   +F    S      P E      D N+   +   K+   V  PE 
Sbjct: 259  PEPTKKSKKNSQSLAMDFPIKGSSNPSLLPTETANSVRDSNVALVSNAAKEELVVQAPEI 318

Query: 558  KSQIEIEKLLDNLGPRYTDWPGSDPSPIDADLLAGTVPGYKPPFRVLPYGVKSSLGPKEG 379
            K + EI+KLLD LGPRYTDWPGSDP P+DADLL   +PGYKPPFRVLPYGV+ SL  ++ 
Sbjct: 319  KYEDEIDKLLDELGPRYTDWPGSDPLPVDADLLPANMPGYKPPFRVLPYGVRPSLSRRDT 378

Query: 378  TTXXXXXXXLPPHFALGRNRQYQGLAAAMLVLWEKCPIAKIALKHGVQLKTSERMAEDIK 199
            T        LPPHFALGR+RQ QGLA AM+ LWEK  IAKIALK GVQL TSERMAEDIK
Sbjct: 379  TNLRRLARGLPPHFALGRSRQLQGLANAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIK 438

Query: 198  KMTGGTLLSRNKHYLVFYRGKSFLSLEVAEMLLEWERSAKALE 70
            K+TGG +LSRN  ++VFYRGK FLS E+AE+LLE ER AK+L+
Sbjct: 439  KLTGGVMLSRNNEFIVFYRGKDFLSSELAEVLLERERLAKSLQ 481


>ref|XP_003577404.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Brachypodium distachyon]
          Length = 881

 Score =  346 bits (888), Expect = 8e-93
 Identities = 210/477 (44%), Positives = 269/477 (56%), Gaps = 22/477 (4%)
 Frame = -2

Query: 1434 LLLQRFSSSAKNLNPSTTSPWIHGWSSTHPYLRPFPKKPRDSIDYSNDDAFSSDDDE--- 1264
            LLL   S S+     S   PW+  WS     LRP    P  ++D   + + +SD DE   
Sbjct: 16   LLLSSISLSSS----SCPYPWLSAWSRPRRGLRP----PAPALDLRPEPSPTSDSDEEDS 67

Query: 1263 VXXXXXXXXXXXXRILNKLQKLGLIEVSNSVNGSHPFS-PEKGSVEDIFHAEDGVLPNPR 1087
            V             IL +LQ+ G      + + +     P++GSVED+F A+DGVLPN R
Sbjct: 68   VGTSRHAGRSTMSLILRRLQRAGYSPEPQAAHAATASRHPQRGSVEDVFRADDGVLPNAR 127

Query: 1086 GGLSLDFSEEVL-------RFLPGMLGVRKEEKKPXXXXXXXXXXXXXXXXXXXXXXXXX 928
            GG   D    ++       R +P      +  K P                         
Sbjct: 128  GGFDDDAESSLVDARFPWERPMPPPEAAARATKSPVWMAELTLPEAELRRLRHATMRIKS 187

Query: 927  XXXXL----TREVVDVIHRRWRSEEVVRLKCEGPAALNMRIMHENLERRTGGMVIWRSGT 760
                     TRE+V  I  +W+++EVVR+K  G  ALNMR+ HE LER+TGG+VIWRSGT
Sbjct: 188  RIQVGGAGVTREIVAKIKEKWKTDEVVRVKVSGTPALNMRLFHEILERKTGGLVIWRSGT 247

Query: 759  SILLYRGAGYGFPLIVKENVLNQSSQCSEFLKTVSCMSRRDPLEDTEDCNMQPPA----- 595
            S+ LYRG  Y  P   K    N++ Q      +++       L + +   MQ        
Sbjct: 248  SVSLYRGVAYDVPETTKGT--NRNWQALGMKSSINIPPMPSSLPNEKVNGMQDRVGALVA 305

Query: 594  --ERKKDAGTVPENKSQIEIEKLLDNLGPRYTDWPGSDPSPIDADLLAGTVPGYKPPFRV 421
              E ++ A TVPE K + EI++LLD LGPRY+DWPGS+P P+DADLL  TVPGYKPPFRV
Sbjct: 306  VTENEETAETVPEIKYEEEIDRLLDELGPRYSDWPGSNPLPVDADLLPATVPGYKPPFRV 365

Query: 420  LPYGVKSSLGPKEGTTXXXXXXXLPPHFALGRNRQYQGLAAAMLVLWEKCPIAKIALKHG 241
            LPYGV+ SL  K+ T        LPPHFALGR+RQ QGLAAAM+ LWE+  IAKIALK G
Sbjct: 366  LPYGVRRSLSRKDTTNLRRLGRGLPPHFALGRSRQLQGLAAAMVKLWERSSIAKIALKRG 425

Query: 240  VQLKTSERMAEDIKKMTGGTLLSRNKHYLVFYRGKSFLSLEVAEMLLEWERSAKALE 70
            VQL TSERMAED+KK+TGG +LSRN  ++VFYRGK FLS E+AE+LLE ERS K+L+
Sbjct: 426  VQLTTSERMAEDLKKLTGGVMLSRNNDFVVFYRGKDFLSSELAEVLLERERSMKSLQ 482


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score =  345 bits (885), Expect = 2e-92
 Identities = 206/470 (43%), Positives = 267/470 (56%), Gaps = 30/470 (6%)
 Frame = -2

Query: 1389 STTSPWIHGWSSTHPYLRPFPKKPRDSIDYSNDDAFSSDDDEVXXXXXXXXXXXXRILNK 1210
            S+   WI  W+   P+ +  PK+ R  ++Y N +  S  D               +I+ K
Sbjct: 78   SSGGNWIDKWNG--PHQKSHPKESRPVMNYRNSETVSRSDG-----GSGGGSTMEKIVEK 130

Query: 1209 LQKLGLIE-VSNSVNGSHPFSPEKGSVEDIFHAEDGVLPNPRGGLSLD------------ 1069
            L+K G ++ V  +         EKGS+EDIF+ E+G+LPNP+GG SLD            
Sbjct: 131  LKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGN 190

Query: 1068 ----FSEEVLRFLPGMLGVRKEEKKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTREV 901
                F  E  +   G + ++                                   +T+ V
Sbjct: 191  GEVRFPWERPKVEEGSVRIKSRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAV 250

Query: 900  VDVIHRRWRSEEVVRLKCEGPAALNMRIMHENLERRTGGMVIWRSGTSILLYRGAGYGFP 721
            VD+I  +W++ E+V+LKCEG AALNMR +HE LER+TGG+VIWRSGTS+ LYRG  Y  P
Sbjct: 251  VDMIREKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVP 310

Query: 720  L-----IVKENVLNQSSQCS----EFLKTVSCMSRRDPLEDTEDCNMQPPAERKKDAGTV 568
            +     + K+N  + SS  S     F  + +  S   P   +        A      G  
Sbjct: 311  VQLNKRVYKKNETSHSSFSSITPNSFAISSNKTSGNAPAVGSNQNVHASQATLNITDGEN 370

Query: 567  PENKSQI----EIEKLLDNLGPRYTDWPGSDPSPIDADLLAGTVPGYKPPFRVLPYGVKS 400
             + +S++    EI+KLLD LGPRYTDWPG DP PIDADLL G + GY+PPFR+LPYGV+S
Sbjct: 371  KDTESEVKYEDEIDKLLDGLGPRYTDWPGCDPLPIDADLLPGKIHGYQPPFRILPYGVRS 430

Query: 399  SLGPKEGTTXXXXXXXLPPHFALGRNRQYQGLAAAMLVLWEKCPIAKIALKHGVQLKTSE 220
            SLG KE T        LPPHFALGR+RQ +GLA AM+ LWE+  IAK+ALK GVQL TSE
Sbjct: 431  SLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSE 490

Query: 219  RMAEDIKKMTGGTLLSRNKHYLVFYRGKSFLSLEVAEMLLEWERSAKALE 70
            RMAEDIKK+TGG LLSRNK +LVFYRGK+FLS +V E LLE ER AKAL+
Sbjct: 491  RMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVTEALLERERLAKALQ 540


>ref|XP_002451033.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
            gi|241936876|gb|EES10021.1| hypothetical protein
            SORBIDRAFT_05g022980 [Sorghum bicolor]
          Length = 895

 Score =  340 bits (871), Expect = 7e-91
 Identities = 213/473 (45%), Positives = 264/473 (55%), Gaps = 30/473 (6%)
 Frame = -2

Query: 1398 LNPSTTSPWIHGWSSTHP------YLRPFPKKPRDSIDYSNDDAFSSDDDEVXXXXXXXX 1237
            L+ S   PW+  WS  HP       LR  P    D     +  + S D+D V        
Sbjct: 23   LSTSAPYPWLSAWS--HPGQRSRSRLRAPPPPALDLRPEPSPSSDSDDEDAVGTSRSSGR 80

Query: 1236 XXXXRILNKLQKLGLIEVSN---SVNGSHPFSPEKGSVEDIFHAEDGVLPNPRGGLSLDF 1066
                 IL++L++ G     +   +   SH   P +GSVED+F A+DGVLPN RGG   D 
Sbjct: 81   STMSLILSRLRRAGYSPAEDPRAAAASSH--HPPRGSVEDVFRADDGVLPNARGGF--DA 136

Query: 1065 SEEVL---RFL------PGMLGVRKEEKKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 913
            ++E L   RF       P      +  + P                              
Sbjct: 137  ADEELGDARFPWERPMPPPEAAPPRATRSPTWMAELTLPAAELRRLRHAAIRIKSRTKVG 196

Query: 912  ----TREVVDVIHRRWRSEEVVRLKCEGPAALNMRIMHENLERRTGGMVIWRSGTSILLY 745
                TRE+V+ I  +W++EEVVR+K  G  ALNMR+ HE LER+TGG+VIWRSGTS+ LY
Sbjct: 197  GAGVTREIVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKTGGLVIWRSGTSVSLY 256

Query: 744  RGAGYGFPLIVKENVLNQSSQCSEFLKTVSCMSRRDPLEDTEDCN--------MQPPAER 589
            RG  Y  P   K +  N  S     +K+    S   PL  TE  N        +   A +
Sbjct: 257  RGVDYDEPETTKGSKKNSQSLS---MKSPIKGSPNPPLPPTEKANSVQDRNGPLVSNAGK 313

Query: 588  KKDAGTVPENKSQIEIEKLLDNLGPRYTDWPGSDPSPIDADLLAGTVPGYKPPFRVLPYG 409
            ++     PE K + EI+KLLD LGPRYTDWPGSDP P+DADLL  TVPGYKPPFRVLPYG
Sbjct: 314  EEIVVQAPEIKYEDEIDKLLDELGPRYTDWPGSDPLPVDADLLPATVPGYKPPFRVLPYG 373

Query: 408  VKSSLGPKEGTTXXXXXXXLPPHFALGRNRQYQGLAAAMLVLWEKCPIAKIALKHGVQLK 229
            V+ SL   + T        LPPHFALGR+RQ QGLA AM+ LWEK  IAK+ALK GVQL 
Sbjct: 374  VRPSLSRMDTTNLRRLARGLPPHFALGRSRQLQGLANAMVKLWEKSSIAKVALKRGVQLT 433

Query: 228  TSERMAEDIKKMTGGTLLSRNKHYLVFYRGKSFLSLEVAEMLLEWERSAKALE 70
            TSERMAEDIKK+TGG +LSRN  ++VFYRGK FLS E+AE+LLE ER AK+L+
Sbjct: 434  TSERMAEDIKKLTGGVMLSRNNEFIVFYRGKDFLSSELAEVLLERERLAKSLQ 486