BLASTX nr result

ID: Dioscorea21_contig00010539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010539
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ09435.1| hypothetical protein OsI_31707 [Oryza sativa Indi...   144   3e-32
ref|NP_001175877.1| Os09g0468300 [Oryza sativa Japonica Group] g...   143   7e-32
ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea ...   141   3e-31
dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]    138   2e-30
tpg|DAA61870.1| TPA: putative RING zinc finger domain superfamil...   135   1e-29

>gb|EAZ09435.1| hypothetical protein OsI_31707 [Oryza sativa Indica Group]
          Length = 401

 Score =  144 bits (364), Expect = 3e-32
 Identities = 86/152 (56%), Positives = 104/152 (68%), Gaps = 9/152 (5%)
 Frame = -1

Query: 1041 AIAVDGDGDQETDNHREELAELARIGSEQRAAQALRSKSVARPV-RFPRSHSTGHSILRR 865
            A+ +D +  +E    REE AEL RIGS +RA   LRSKS   P  RFPRSHSTGHS+   
Sbjct: 211  AVVIDVEETEEERIIREEAAELTRIGSLKRA---LRSKSGRAPAARFPRSHSTGHSLSSS 267

Query: 864  PGENL--DRFTLRLPEHVRREMVVAG-LQRTTSSLAFPGGGEASARRGYRAG-----EGS 709
               +   +RFTLRLPEHV RE++ AG LQRTTS +AF  G + S RRG R+G     EGS
Sbjct: 268  AAASAGAERFTLRLPEHVLREVIAAGQLQRTTSLVAFRAGRQGSTRRGLRSGGGGGGEGS 327

Query: 708  SRAGRSIRLGRSDRWPSVLARTLSARFTSWGN 613
            SRAG+S+RLG+S RWPS LART SAR  +WG+
Sbjct: 328  SRAGKSVRLGQSGRWPSFLARTFSARLPAWGS 359


>ref|NP_001175877.1| Os09g0468300 [Oryza sativa Japonica Group]
            gi|47497675|dbj|BAD19742.1| RING-H2 zinc finger protein
            ATL6-like [Oryza sativa Japonica Group]
            gi|255678964|dbj|BAH94605.1| Os09g0468300 [Oryza sativa
            Japonica Group]
          Length = 392

 Score =  143 bits (361), Expect = 7e-32
 Identities = 86/153 (56%), Positives = 103/153 (67%), Gaps = 10/153 (6%)
 Frame = -1

Query: 1041 AIAVDGDGDQETDNHREELAELARIGSEQRAAQALRSKSVARPV-RFPRSHSTGHSILRR 865
            A+ +D +  +E    REE AEL RIGS +RA   LRSKS   P  RFPRSHSTGHS+   
Sbjct: 216  AVVIDVEETEEERIIREEAAELTRIGSLKRA---LRSKSGRAPAARFPRSHSTGHSLSSS 272

Query: 864  PGENL--DRFTLRLPEHVRREMVVAG-LQRTTSSLAFPGGGEASARRGYRAG------EG 712
               +   +RFTLRLPEHV RE++ AG LQRTTS +AF  G + S RRG R+G      EG
Sbjct: 273  AAASAGAERFTLRLPEHVLREVIAAGQLQRTTSLVAFRAGRQGSTRRGLRSGGGGGGGEG 332

Query: 711  SSRAGRSIRLGRSDRWPSVLARTLSARFTSWGN 613
            SSRAGRS+RLG+S RWPS L RT SAR  +WG+
Sbjct: 333  SSRAGRSVRLGQSGRWPSFLPRTFSARLPAWGS 365


>ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea mays]
            gi|194707124|gb|ACF87646.1| unknown [Zea mays]
            gi|414589721|tpg|DAA40292.1| TPA: putative RING zinc
            finger domain superfamily protein [Zea mays]
          Length = 393

 Score =  141 bits (356), Expect = 3e-31
 Identities = 85/156 (54%), Positives = 99/156 (63%), Gaps = 13/156 (8%)
 Frame = -1

Query: 1041 AIAVDGDGDQETDNHREELAELARIGSEQRAAQALRSKSVARPVRFPRSHSTGHSILRRP 862
            A+ +D D  +E    REE  EL RIGS +RA   LRSKS   P RFPRSHSTGHS+    
Sbjct: 216  AVVIDVDETEEERIIREEANELVRIGSVKRA---LRSKSGRAPARFPRSHSTGHSLAASA 272

Query: 861  --------GENLDRFTLRLPEHVRREMVVAG-LQRTTSSLAFPGGGEASARRGYRA---- 721
                    G + +RFTLRLPEHV R++  AG LQRTTS +AF      S RRG       
Sbjct: 273  TTGTGAGAGASTERFTLRLPEHVLRDLAAAGKLQRTTSLVAFRSSRGGSTRRGVSVRTGG 332

Query: 720  GEGSSRAGRSIRLGRSDRWPSVLARTLSARFTSWGN 613
            GEGSSRAGRSIRLG+S RWPS L+RT SAR  +WG+
Sbjct: 333  GEGSSRAGRSIRLGQSGRWPSFLSRTFSARLPAWGS 368


>dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score =  138 bits (348), Expect = 2e-30
 Identities = 80/145 (55%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
 Frame = -1

Query: 1041 AIAVDGDGDQETDNHREELAELARIGSEQRAAQALRSKSVARPVRFPRSHSTGHSILRRP 862
            A+ +D +  ++    REE  EL RIGS +RA   LRSKS   P RFPRSHSTGHS+  R 
Sbjct: 221  AVVIDVEESEDERIIREETDELTRIGSLKRA---LRSKSSRGPARFPRSHSTGHSLAARA 277

Query: 861  GENLDRFTLRLPEHVRREMVVAG-LQRTTSSLAFPGGGEASARRGYR-AGEGSSRAGRSI 688
            G   +RFTLRLPE V RE+V AG L+RT S +AF  G + S RR  R  G+GSSR GRS+
Sbjct: 278  GTGAERFTLRLPESVLREVVAAGKLRRTQSLVAFTAGRQGSTRRALRLGGDGSSRGGRSV 337

Query: 687  RLGRSDRWPSVLARTLSARFTSWGN 613
            RLG+S RWPS L+RT SA   +WG+
Sbjct: 338  RLGQSGRWPSFLSRTFSA---AWGS 359


>tpg|DAA61870.1| TPA: putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 404

 Score =  135 bits (341), Expect = 1e-29
 Identities = 82/152 (53%), Positives = 97/152 (63%), Gaps = 9/152 (5%)
 Frame = -1

Query: 1041 AIAVDGDGDQETDNHREELAELARIGSEQRAAQALRSKSVARPVRFPRSHSTGHSILRRP 862
            A+ +D +  +E    R E  EL RIGS +RA   LRSKS   P RFPRSHSTGHS+    
Sbjct: 214  AVVIDVEETEEERIIRAEADELMRIGSVKRA---LRSKSGRAPARFPRSHSTGHSLAASA 270

Query: 861  --GENLDRFTLRLPEHVRREMVVAG-LQRTTSSLAFPGGGEASARRGYRA------GEGS 709
                  +RFTLRLP+HV R++  AG LQRTTS +AF      S RRG         GEG+
Sbjct: 271  CATTGTERFTLRLPDHVLRDLTAAGKLQRTTSLVAFRSSRGGSTRRGVSVRTGGGGGEGT 330

Query: 708  SRAGRSIRLGRSDRWPSVLARTLSARFTSWGN 613
            SRAGRSIRLG+S RWPS LARTLSAR  +WG+
Sbjct: 331  SRAGRSIRLGQSGRWPSFLARTLSARLPAWGS 362


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