BLASTX nr result

ID: Dioscorea21_contig00010480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010480
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
dbj|BAJ95024.1| predicted protein [Hordeum vulgare subsp. vulgare]     87   2e-15
dbj|BAJ94316.1| predicted protein [Hordeum vulgare subsp. vulgare]     87   2e-15
ref|XP_003537683.1| PREDICTED: rab proteins geranylgeranyltransf...    82   6e-14
gb|EEE54301.1| hypothetical protein OsJ_01236 [Oryza sativa Japo...    82   6e-14

>ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|222832862|gb|EEE71339.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/67 (58%), Positives = 57/67 (85%)
 Frame = +1

Query: 43  LNSLNLLGKVARGVCITNCSVQPELSNILLVFPPRSLHYEQRASVRALQLSSNVSVCPQG 222
           L++ ++ GKVARG+CIT  S++P++SN+L+V+PPRSL+ EQ  S+RALQ+S N++VCP G
Sbjct: 371 LSTRDVKGKVARGICITRNSLKPDMSNLLVVYPPRSLYPEQITSIRALQISGNLAVCPLG 430

Query: 223 CFVVYLS 243
            FV+YLS
Sbjct: 431 MFVLYLS 437


>dbj|BAJ95024.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 539

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/72 (58%), Positives = 54/72 (75%)
 Frame = +1

Query: 31  VQEGLNSLNLLGKVARGVCITNCSVQPELSNILLVFPPRSLHYEQRASVRALQLSSNVSV 210
           +  G +  NL  KVARGVCI + S++   SN+L+VFPP+SL  +Q  +VRALQLSSNV+V
Sbjct: 354 MSSGTSDSNLTRKVARGVCIISSSIKQASSNVLVVFPPKSLQEQQATAVRALQLSSNVAV 413

Query: 211 CPQGCFVVYLST 246
           CP G F+VYLST
Sbjct: 414 CPPGMFMVYLST 425


>dbj|BAJ94316.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 560

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/72 (58%), Positives = 54/72 (75%)
 Frame = +1

Query: 31  VQEGLNSLNLLGKVARGVCITNCSVQPELSNILLVFPPRSLHYEQRASVRALQLSSNVSV 210
           +  G +  NL  KVARGVCI + S++   SN+L+VFPP+SL  +Q  +VRALQLSSNV+V
Sbjct: 375 MSSGTSDSNLTRKVARGVCIISSSIKQASSNVLVVFPPKSLQEQQATAVRALQLSSNVAV 434

Query: 211 CPQGCFVVYLST 246
           CP G F+VYLST
Sbjct: 435 CPPGMFMVYLST 446


>ref|XP_003537683.1| PREDICTED: rab proteins geranylgeranyltransferase component A-like
           [Glycine max]
          Length = 551

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 35/68 (51%), Positives = 52/68 (76%)
 Frame = +1

Query: 43  LNSLNLLGKVARGVCITNCSVQPELSNILLVFPPRSLHYEQRASVRALQLSSNVSVCPQG 222
           L   ++ G VARG+CIT  S++P++SN  +V+PPRSL+ EQ  S++ALQ+ SN++VCP G
Sbjct: 367 LGQRDIKGMVARGICITRSSIKPDVSNCSVVYPPRSLYPEQLTSIKALQIGSNLAVCPAG 426

Query: 223 CFVVYLST 246
            F++Y ST
Sbjct: 427 TFILYFST 434


>gb|EEE54301.1| hypothetical protein OsJ_01236 [Oryza sativa Japonica Group]
          Length = 550

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/64 (60%), Positives = 50/64 (78%)
 Frame = +1

Query: 55  NLLGKVARGVCITNCSVQPELSNILLVFPPRSLHYEQRASVRALQLSSNVSVCPQGCFVV 234
           NL  KVARG+CI + SV+ + SN+L+VFPP+SL  EQ  +VR LQLSSN++VCP G F+ 
Sbjct: 371 NLPRKVARGICIISSSVRQDTSNVLVVFPPKSLEEEQITAVRVLQLSSNLAVCPPGMFMA 430

Query: 235 YLST 246
           YLST
Sbjct: 431 YLST 434


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