BLASTX nr result

ID: Dioscorea21_contig00010476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010476
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]   209   1e-51
ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-51
emb|CBI17546.3| unnamed protein product [Vitis vinifera]              207   3e-51
ref|XP_003575420.1| PREDICTED: pentatricopeptide repeat-containi...   199   9e-49
ref|NP_001047508.1| Os02g0633200 [Oryza sativa Japonica Group] g...   186   1e-44

>emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
          Length = 416

 Score =  209 bits (532), Expect = 1e-51
 Identities = 111/261 (42%), Positives = 155/261 (59%)
 Frame = -1

Query: 968 RTIPTVNYILSALNRSKXXXXXXXXXXXXXXXXXXXPDHVSYGILIKSHCLLRRASSHAL 789
           R+  + N +LSA N+SK                   PD +SYGIL+KS+C     S  A+
Sbjct: 141 RSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGIXPDKISYGILVKSYCE-SGLSDKAI 199

Query: 788 PLLHELRSKNLHITPVILTTILDSLYKEGKPDQAEKIWQEMKSNAALDLPAYNVRIMHYA 609
            +L E+  K + IT V  TTILD+LYK+G+ D+AEK+W EM     LD+ AYNV+IM +A
Sbjct: 200 SMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGCLDVGAYNVKIM-FA 258

Query: 608 FTGRPKDILNLIEEMEAAGFKPDIITFNYLMTCYCNNGRLEDAKRVYRELGARGCEPNAV 429
             G P+++  LI+EM  AG KPD I++NYLMT YC +G +++AK+VY EL   GC PNA 
Sbjct: 259 HGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMMDEAKKVYAELEETGCHPNAA 318

Query: 428 TFNNFVHLLCKNGDFAAAAEVSMDGMKRNKVPDFGTTKMLVEGLLRGXXXXXXXXXXXXX 249
           TF   ++ LC++GDF    +V      R K+PDFGT + LVEGL++              
Sbjct: 319 TFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTV 378

Query: 248 RNKFPAKFEGGWKELGREVGL 186
           +  FPA F   W++L  ++GL
Sbjct: 379 KKNFPANFLNVWRKLEEDLGL 399


>ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial-like [Vitis vinifera]
          Length = 414

 Score =  209 bits (531), Expect = 1e-51
 Identities = 110/261 (42%), Positives = 154/261 (59%)
 Frame = -1

Query: 968 RTIPTVNYILSALNRSKXXXXXXXXXXXXXXXXXXXPDHVSYGILIKSHCLLRRASSHAL 789
           R+  + N +LSA N+SK                   PD +SYGIL+KS+C     S  A+
Sbjct: 139 RSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGVLPDKISYGILVKSYCE-SGLSDKAI 197

Query: 788 PLLHELRSKNLHITPVILTTILDSLYKEGKPDQAEKIWQEMKSNAALDLPAYNVRIMHYA 609
            +L E+  K + IT V  TTILD+LYK+G+ D+AEK+W EM     LD+ AYNV+IM +A
Sbjct: 198 SMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGCLDVGAYNVKIM-FA 256

Query: 608 FTGRPKDILNLIEEMEAAGFKPDIITFNYLMTCYCNNGRLEDAKRVYRELGARGCEPNAV 429
             G P+++  LI+EM  AG KPD I++NYLMT YC +G +++AK+VY EL   GC PNA 
Sbjct: 257 HGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEAKKVYAELEETGCHPNAA 316

Query: 428 TFNNFVHLLCKNGDFAAAAEVSMDGMKRNKVPDFGTTKMLVEGLLRGXXXXXXXXXXXXX 249
           TF   ++ LC++GDF    +V      R K+PDFGT + LVEGL++              
Sbjct: 317 TFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTV 376

Query: 248 RNKFPAKFEGGWKELGREVGL 186
           +  FPA F   W++L  ++GL
Sbjct: 377 KKNFPANFLNVWRKLEEDLGL 397


>emb|CBI17546.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  207 bits (528), Expect = 3e-51
 Identities = 117/284 (41%), Positives = 162/284 (57%), Gaps = 1/284 (0%)
 Frame = -1

Query: 1034 TIRNLAKSSRHAEIAALLKPPSRTIP-TVNYILSALNRSKXXXXXXXXXXXXXXXXXXXP 858
            T++ LAKS R A+I  L++        T    LS L RS                    P
Sbjct: 77   TVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRS----YVPKFFEEIPRRYGVLP 132

Query: 857  DHVSYGILIKSHCLLRRASSHALPLLHELRSKNLHITPVILTTILDSLYKEGKPDQAEKI 678
            D +SYGIL+KS+C     S  A+ +L E+  K + IT V  TTILD+LYK+G+ D+AEK+
Sbjct: 133  DKISYGILVKSYCE-SGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKV 191

Query: 677  WQEMKSNAALDLPAYNVRIMHYAFTGRPKDILNLIEEMEAAGFKPDIITFNYLMTCYCNN 498
            W EM     LD+ AYNV+IM +A  G P+++  LI+EM  AG KPD I++NYLMT YC +
Sbjct: 192  WHEMAKKGCLDVGAYNVKIM-FAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKS 250

Query: 497  GRLEDAKRVYRELGARGCEPNAVTFNNFVHLLCKNGDFAAAAEVSMDGMKRNKVPDFGTT 318
            G +++AK+VY EL   GC PNA TF   ++ LC++GDF    +V      R K+PDFGT 
Sbjct: 251  GMVDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTL 310

Query: 317  KMLVEGLLRGXXXXXXXXXXXXXRNKFPAKFEGGWKELGREVGL 186
            + LVEGL++              +  FPA F   W++L  ++GL
Sbjct: 311  RHLVEGLVQKKKTKEAKGLIRTVKKNFPANFLNVWRKLEEDLGL 354


>ref|XP_003575420.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial-like [Brachypodium distachyon]
          Length = 468

 Score =  199 bits (507), Expect = 9e-49
 Identities = 106/270 (39%), Positives = 158/270 (58%), Gaps = 1/270 (0%)
 Frame = -1

Query: 992 AALLKPPSRTIPTVNYILSALNRSKXXXXXXXXXXXXXXXXXXXPDHVSYGILIKSHCLL 813
           A  L  P   +P  N +LSA  R +                   PD  SYGIL+K+HC++
Sbjct: 132 APSLPSPISPMP-FNALLSAFVRCRRHRRVPVLFTELSKEFSITPDATSYGILVKAHCMV 190

Query: 812 RRASSHALPLLHELRSKNLHITPVILTTILDSLYKEGKPDQAEKIWQEM-KSNAALDLPA 636
           R   + A  +L ++R + +  T  I TT++DS+YK+ K ++AE +W++M +S    D   
Sbjct: 191 RH-DAKAHEVLAQMREEGISPTTTIFTTMIDSMYKQKKIEEAETLWKQMLESGCKPDQAT 249

Query: 635 YNVRIMHYAFTGRPKDILNLIEEMEAAGFKPDIITFNYLMTCYCNNGRLEDAKRVYRELG 456
           YNV+ M++   G+P+D+L ++ EMEAAG KPD IT+N+LMT YC NG++EDAK +Y  LG
Sbjct: 250 YNVKAMNFGLHGKPEDVLLVMAEMEAAGVKPDTITYNFLMTSYCKNGKVEDAKGLYHSLG 309

Query: 455 ARGCEPNAVTFNNFVHLLCKNGDFAAAAEVSMDGMKRNKVPDFGTTKMLVEGLLRGXXXX 276
           A+GC PNA T+ + +  L  +GDF AA ++  + + ++KVPDF T K  VEGL +G    
Sbjct: 310 AKGCSPNAATYKHMMAYLFAHGDFDAAMKIFRESLSKHKVPDFKTMKGFVEGLAKGGKVA 369

Query: 275 XXXXXXXXXRNKFPAKFEGGWKELGREVGL 186
                    +  FP     GWK+L +E+GL
Sbjct: 370 EAKDVISEVKKMFPENLLSGWKKLEKELGL 399


>ref|NP_001047508.1| Os02g0633200 [Oryza sativa Japonica Group]
           gi|49388176|dbj|BAD25302.1| membrane-associated
           salt-inducible protein like [Oryza sativa Japonica
           Group] gi|113537039|dbj|BAF09422.1| Os02g0633200 [Oryza
           sativa Japonica Group] gi|125540409|gb|EAY86804.1|
           hypothetical protein OsI_08180 [Oryza sativa Indica
           Group] gi|125582977|gb|EAZ23908.1| hypothetical protein
           OsJ_07630 [Oryza sativa Japonica Group]
           gi|215693356|dbj|BAG88738.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 455

 Score =  186 bits (472), Expect = 1e-44
 Identities = 92/225 (40%), Positives = 139/225 (61%), Gaps = 1/225 (0%)
 Frame = -1

Query: 857 DHVSYGILIKSHCLLRRASSHALPLLHELRSKNLHITPVILTTILDSLYKEGKPDQAEKI 678
           D  SYGIL+K++C+L +  + A  +L ++R +    T  I TT++DS+YK+ K +QAE++
Sbjct: 175 DASSYGILVKAYCMLSK-DAKAHEVLDQMRGQGFTPTNSIYTTMIDSMYKQKKMEQAERL 233

Query: 677 WQEM-KSNAALDLPAYNVRIMHYAFTGRPKDILNLIEEMEAAGFKPDIITFNYLMTCYCN 501
           W++M +S    D   YN +IMH++  G+ +D+L +I EME AG KPD IT+N+LMT YC 
Sbjct: 234 WKQMLESGRKPDQAVYNTKIMHHSLHGKTEDVLEVIAEMEEAGVKPDTITYNFLMTSYCK 293

Query: 500 NGRLEDAKRVYRELGARGCEPNAVTFNNFVHLLCKNGDFAAAAEVSMDGMKRNKVPDFGT 321
           +G++E AK +YR LG +GC  NA T+ + +  LC +GD   A  +  +  + NKVPDF T
Sbjct: 294 HGKMETAKELYRSLGEKGCSANAATYKHMMAQLCAHGDLDGALVIFKESYRSNKVPDFRT 353

Query: 320 TKMLVEGLLRGXXXXXXXXXXXXXRNKFPAKFEGGWKELGREVGL 186
              LVEGL +              + KFP +   GW +L +E+GL
Sbjct: 354 MSGLVEGLTKAGRVAEAKNIVAKMKKKFPEQLLSGWMKLEKELGL 398


Top