BLASTX nr result

ID: Dioscorea21_contig00010469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010469
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35896.1| unknown [Lotus japonicus]                              100   2e-19
ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like ...   100   2e-19
emb|CBI35789.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like ...    99   5e-19
ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Rici...    99   5e-19

>gb|AFK35896.1| unknown [Lotus japonicus]
          Length = 286

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
 Frame = -3

Query: 233 GLDPEALKSIPVVA--QSELETSAECAVCLSEIADGDKARVLPTCRHVFHVDCVDVWFST 60
           GLDP  L+S+PVV     + +   ECAVCLSE+ +G+KAR+LP C H FHVDC+D+WF +
Sbjct: 74  GLDPSVLRSLPVVVFQSQDFKDGLECAVCLSELDEGEKARLLPKCNHGFHVDCIDMWFQS 133

Query: 59  HATCPLCRSIVA 24
           H+TCPLCR+ VA
Sbjct: 134 HSTCPLCRTSVA 145


>ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 314

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
 Frame = -3

Query: 233 GLDPEALKSIPVVA--QSELETSAECAVCLSEIADGDKARVLPTCRHVFHVDCVDVWFST 60
           GLDP  LKS+PV+     + +   ECAVCLSEI  G+K R+LP C H FHVDC+D+WF +
Sbjct: 84  GLDPSVLKSLPVLVFQPEDFKEGLECAVCLSEIVQGEKLRLLPKCNHGFHVDCIDMWFHS 143

Query: 59  HATCPLCRSIVAVPSS 12
           H+TCPLCR+ VA  SS
Sbjct: 144 HSTCPLCRNPVAFESS 159


>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
 Frame = -3

Query: 233 GLDPEALKSIPVVA--QSELETSAECAVCLSEIADGDKARVLPTCRHVFHVDCVDVWFST 60
           GLDP  L SIPV+     E +   ECAVCLSE+  G+KAR+LP C H FHV+C+D+WF +
Sbjct: 97  GLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLPKCNHGFHVECIDMWFQS 156

Query: 59  HATCPLCRSIVAVPSSS 9
           H+TCPLCR++VA  S++
Sbjct: 157 HSTCPLCRNLVATSSAA 173


>ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 319

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
 Frame = -3

Query: 233 GLDPEALKSIPVVA--QSELETSAECAVCLSEIADGDKARVLPTCRHVFHVDCVDVWFST 60
           GLDP  LKS+ V+     E +   ECAVCLSEI +G+K R+LP C H FHVDC+D+WF +
Sbjct: 83  GLDPSVLKSLAVLVFQPEEFKEGLECAVCLSEIVEGEKLRLLPKCNHGFHVDCIDMWFHS 142

Query: 59  HATCPLCRSIVAVPSSSI 6
           H+TCPLCR+ V   SS I
Sbjct: 143 HSTCPLCRNPVTFESSKI 160


>ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Ricinus communis]
           gi|223526251|gb|EEF28567.1| RING-H2 finger protein
           ATL1M, putative [Ricinus communis]
          Length = 281

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
 Frame = -3

Query: 233 GLDPEALKSIPVVA-QSE-LETSAECAVCLSEIADGDKARVLPTCRHVFHVDCVDVWFST 60
           GLD   L+S+PVV  QSE  +   ECAVCLSEIA G+KAR+LP C H FHVDC+D+WF +
Sbjct: 73  GLDMSVLRSLPVVIFQSEDFKDGLECAVCLSEIAQGEKARLLPKCNHGFHVDCIDMWFQS 132

Query: 59  HATCPLCRSIVA 24
           H+TCPLCR+ VA
Sbjct: 133 HSTCPLCRNSVA 144


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